KEGG   Cryptococcus neoformans var. neoformans JEC21: CNG02350
Entry
CNG02350          CDS       T00243                                 
Name
(RefSeq) SSD1 protein, putative
  KO
K18748  protein SSD1
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CNG02350
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     CNG02350
SSDB
Motif
Pfam: RNB OB_Dis3 Dis3l2_C_term CSD2 Rrp44_CSD1 Rrp44_S1 OB_HELZ2
Other DBs
NCBI-GeneID: 3258976
NCBI-ProteinID: XP_024513232
UniProt: Q5KDY7
LinkDB
Position
7:join(669506..671272,671315..672427,672486..672769,672820..672972,673023..673186,673234..673444,673499..673622,673676..673825,673874..674118,674176..674260,674310..674373,674427..674504,674561..674700,674754..674839,674888..675219,675277..675296)
AA seq 1671 aa
MADPVSPTPDHQPQATLAPPPAHPSRPSSANSQKSNSSRGRGKNANGGSSNMSRTNSNTS
GQSDSGRSDKKRQSGPTTTISGGVSLGVSGEVPQQSKKGKGKGKNQDKEKESEKKGASSE
VEKPQKNNSQKGRRSASGRKPHLTSTNESSRTVSRNSEGENMPADAGSAQSAPGPKSIHA
PVSAPRTAIEAAVEAATKKHRSQTGGDALASLQKMISDLKTLPATSGPASGSSAGSRSTS
VTRDPPSSSSAKTEPIAIPNAPNSGSHKTLKADAPTFTPSFQSFSPVASTSGLSVSPNTT
MPTLTQLHPRSQSQSNGAHHRRNSASSMSSVNFAPPFNPSPIQAFGNPLPPFYQTPLSVH
AEADGESLSPLSFAQHASFQYQQQQLLAAQQQQYQYIQLLQAQLAASQLAHQQAQQAAQH
QNQQMGNFIAPRFQALAAQRAASQQQQQAAQLAQAQQVFELQQAQLLLQQEEATRTSVRA
AAEAAHPQDQPVFEEESPELQPHTVGPTGRPQLAPSFTFGAKSKHGATESVSERGSGRES
LSPAQSSRSPIVVNRSEGIGGAAATGLAGLAARAHKRTGSEMSSVLQQQFAIQQEIEALQ
AKQKALMQQDLTQQGDNPLTQLNTAYAQKQTPSQTLSRHRRVQSSLPSASVPVDFEREQG
QPRPMKSVGEMPPPPIPSGHGRRHSVNILNKAAGSGMGFGLADDIPEDVVAPSGHRRSSS
RSGLESGSWRLGASSGNAQSSQNQVADLAAAQAQLQSLAQFRAAAGGGHSKMASFSFPNM
LPNLLAATTLQAPVGQSLWQQQQAFQMQLQQTTQGPQRKSLFAPYLPQASLPPLLQAGKL
VVGVLRVNKKNRSDAYVATDVLDADIYICGSKDRNRALEGDIVAVELLDVDEVWSTKKDK
EEKKRKKEENATYDLKPSTVKKLEKKKDDVEVEGQGLTLFDDEEVNDDTKPTYAGHVVAV
VERMPGQLFSGQLGVLRPSSAATKEKQELERREREGEKARKEEPETRPKIVWFKPTDKRV
PLIAIPTEQAPADFIDNPDAYSNKLFVATIKRWPITSLHPFGTLVEELGAIGNSEVETSA
LLKDCNFPTEEFSEMTMKCLPPMPWSVPEREYDVRTDLREERVFTIDPPHSKDLDDALSF
KDNKDGTFTVGVHIADVSFFVKANAQLDREARKRATSVYLVQRAVPMFPPLLSEDLCSLV
PDYERLTFSAIFTVDEEGNVLQKKFAKTIVKSCAKLTYDDALTVVKGGALPRSKTSRIHL
ATDIEGDIRSLHSIASKMRARRIENGAMVVSSSKVSFEFDAQGRPVDCQTYQNGEASVIV
EEFMLLTNQSVARIIANALPEQALLRRHEPPSERRLESFVARATKLGFDMDPTSAGTLQK
SFDKVLDNDSALCIDLLRKKVIQRARYFCAGMLDIAKFAHWGLNTPLYTHFTSPIRRYAD
VLVHRMLDACLTSPNPNEVKFLMDRDQVAKAAQQCNMKKQSAKLAEEQSVHLFLCILIND
LTEHYGPVVREARVTNVLETAFDVIIPEFGVEKRVHVDKMPVETAVYDEHRDILSLYWTT
KDVISHLADTTEDKRLLKIKSHGEQRALGSSTSQATDDTALFDGNSPDVVSKQYAKSAHP
SPLKFEGLRSVDGGHKVQDVKELMSLPVIITSDMTKSPPVLVVYACNPYAT
NT seq 5016 nt   +upstreamnt  +downstreamnt
atggccgatcctgtgtccccaactccggatcatcagcctcaagccacccttgcgccccct
ccggcccatccttctcgtccaagttctgcaaactctcaaaagagtaattcttctaggggt
cgtggtaaaaatgcaaatggaggatcatctaacatgtctcgaaccaactcaaacacttct
ggccagtcagacagtggacgaagcgataaaaagaggcagagcggccccacaaccacaatc
agcggtggtgtgagtttgggtgtgagtggagaggtacctcagcaaagcaagaaaggaaaa
gggaaaggaaagaaccaggataaggagaaggaaagtgagaaaaaaggcgcttcttcggag
gtcgaaaaacctcagaagaacaacagtcagaaagggagaaggtcggcctccgggagaaaa
ccgcatcttaccagtacaaacgaatcctcgcgtactgtgtcgcgaaactcggagggtgaa
aacatgccggcggatgcgggttcagcgcagtctgcacccgggccgaaatcgatccacgct
cccgtgtctgctccaagaactgcaatcgaagccgcggtggaggctgcaaccaagaagcac
agatcacaaacaggtggcgatgctcttgcgagcttgcagaagatgatttctgatctaaag
accctacctgccacctctggacctgcaagtgggagttctgccggatcgaggtcgactagt
gtcactcgggatcctccctcctcttcttcggctaaaaccgagccaatcgctattcctaat
gctcccaactcgggatctcacaagactctgaaggccgacgcgccaacgttcaccccttcc
ttccaatcattctctccggttgcctcaacatcaggtctttcagtctctcccaataccacc
atgccgacactcacccagttgcatcctcgctctcagtctcaaagtaacggggcccatcat
cgcagaaattctgcaagctccatgtcaagcgtgaactttgcccctcccttcaatccatct
cctatccaggcctttgggaaccctcttcctccattctaccagacgccattatcagtccac
gccgaagcggacggcgaaagcctttcaccattatcttttgcacagcatgctagcttccag
tatcaacaacagcagcttcttgcagctcagcaacagcagtatcagtacattcaacttctt
caagcacagctcgccgctagtcagcttgcccatcaacaagcccagcaagctgcacagcac
cagaaccagcagatgggaaacttcattgctccccgtttccaagcgcttgcagctcaaaga
gctgcctctcagcaacagcaacaagccgctcagcttgcgcaggcccaacaagtattcgag
cttcaacaagctcagctgcttctacaacaagaggaagccactcggacatccgtccgcgct
gcagcggaagcggctcaccctcaggatcagcctgtattcgaagaggaatcccctgaactc
caaccccataccgttggaccgaccggtagacctcagcttgctccttcctttacctttgga
gctaaatcgaagcatggcgcgacggaaagtgtgtcggaacgaggttccggaagagaatcg
ctgtcgcctgctcaaagcagtcggtcgcctattgtggtgaaccgaagcgaaggtattgga
ggtgccgctgccactggacttgcaggtctggctgctagagcacacaagagaacggggagt
gaaatgtcatcagttttacagcagcagtttgcgatacaacaagagatcgaggccctccaa
gctaagcagaaggccctcatgcaacaggatctgacccaacaaggcgacaaccctcttacg
caactgaacactgcatacgcacagaagcaaacgccttctcagaccctctcccgccatcgt
cgtgtgcaatcaagcttgccgtcagcttcagttcctgttgactttgaacgcgaacaaggc
caacctcgtccaatgaagtctgtcggcgaaatgccccctccacctataccatcgggtcac
ggaaggcgccacagcgtcaacattctcaataaggctgccggttctggtatgggcttcggt
ttggcggatgatatacctgaggatgttgtggctccctctggacatcgtcgatccagcagc
cgatcgggacttgaaagcggcagctggcgtcttggtgcatcgtcaggcaatgctcagagc
agtcagaaccaagttgctgatcttgctgcggcacaggcccagcttcagtctctggcacag
ttccgggcagctgctggtggggggcactccaagatggcttcgttcagcttccccaatatg
ttaccaaacttgcttgccgcaacaactttgcaggcaccggttggccaatctctctggcaa
caacaacaggcatttcagatgcagttgcagcagacaactcagggacctcaacgcaaatct
ctctttgcgccctatcttccccaagcatcattaccgcctcttctccaggccggtaaactc
gttgttggcgtactgagagtcaataagaaaaatcgatccgacgcttatgtcgctacagac
gttttggatgccgatatatacatttgtggttcaaaggacaggaacagggcgcttgaaggt
gacattgtcgctgttgaattgctcgatgttgatgaggtgtggagcacaaagaaggataag
gaggagaagaagaggaagaaggaagagaacgcgacatatgacctgaaaccttcgactgtg
aaaaagcttgaaaagaagaaggatgatgtggaggttgagggtcagggcttgaccttattt
gacgatgaagaagtaaatgacgacacaaagcctacttatgctggtcacgtcgtggctgtg
gttgagcgaatgcccggccagttattctccggacagcttggcgttctccgtccatcctca
gccgccacaaaggaaaagcaagagcttgaacgtcgcgagagggagggcgagaaagccagg
aaagaagagcctgagacacgcccaaagattgtctggttcaagccaacggataagcgagtg
ccattaattgccattcccactgaacaagctcccgccgatttcatcgacaacccggacgca
tacagcaacaagctcttcgtggctacaatcaagcgatggcccatcacctcacttcatcct
ttcggcactcttgtggaagagcttggagccataggcaactccgaagttgagacaagtgcc
ttgctgaaggattgtaacttccccactgaggagttctctgagatgactatgaaatgtttg
ccaccaatgccgtggagcgtcccagagcgagaatacgatgttcgaacggatttgagggag
gagagagtcttcacaattgacccaccccactcaaaggatttggacgacgctctttccttc
aaggataataaagatggaacttttactgttggtgtccacatcgcagatgtatccttcttt
gtcaaagccaatgctcagcttgatcgggaagctcgtaaacgtgccaccagcgtttaccta
gttcagcgcgctgttccgatgtttcctcctttgttatccgaagatctctgcagtcttgtt
ccagattatgaacgactaacgttctcggctatatttaccgtggacgaggaaggcaatgtt
ctgcaaaagaagtttgcgaaaaccattgtaaaatcttgcgccaaattgacctatgacgat
gctcttactgttgtaaagggtggtgccttacctcggtctaagacttcccgtatacattta
gctactgatattgagggagatatcaggtccttgcactccattgccagcaaaatgcgggca
aggcgaatcgagaatggggcgatggttgttagctcatcaaaagtgtccttcgagtttgat
gctcaaggtcgtccagtcgattgccagacgtatcaaaacggcgaagcgtccgttatcgtg
gaagaattcatgcttctcacaaaccagtcggtcgctcgcattattgcaaacgcccttcca
gagcaagctcttcttcgccgccatgagcctccatcggaacgcaggctggaatcatttgtc
gcgcgagctaccaagcttggcttcgatatggatcctacgagtgctggcaccttgcaaaag
tcatttgataaggtgctagacaacgactctgccctttgcattgatcttttgaggaaaaag
gttatacaaagagctcgatacttttgcgctggtatgctggatattgcaaaattcgctcac
tggggtctgaacactccattatatactcatttcacctctcccatccgtcgttatgccgac
gttcttgtccaccgcatgcttgatgcctgtttgacaagtcccaatcccaacgaagtaaag
ttccttatggacagggatcaagtggccaaggcagctcagcaatgtaatatgaagaagcag
agcgccaagctggccgaagagcaatcagttcatctcttcctttgtattctcattaatgat
ttgacggagcactacggccctgttgtccgtgaagctagggtgacaaacgttctcgagact
gcattcgatgtaatcattcccgaattcggcgttgaaaaaagggtgcacgtagacaagatg
cccgtggaaacagctgtctacgatgagcatcgggatatcctatcgttatactggacaacg
aaggatgttatctcacaccttgctgataccaccgaggacaaacgcttactgaagattaag
tcccatggagaacaacgtgcacttggatcctctacttcccaggccaccgatgacactgct
ttgttcgatggcaacagccctgacgtggtttcaaagcagtatgcaaagtcagcccaccct
tcgccactcaaatttgaggggctccgctctgtagatggaggtcacaaggttcaggatgtc
aaggagttaatgagtctgccagtcatcattaccagtgacatgaccaagagcccacctgtt
ttggttgtgtatgcttgtaatccgtacgcgacgtaa

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