Cryptococcus neoformans var. neoformans JEC21: CNG02470
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Entry
CNG02470 CDS
T00243
Name
(RefSeq) Activator 1 40 kDa subunit, putative
KO
K10755
replication factor C subunit 2/4
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03030
DNA replication
cne03410
Base excision repair
cne03420
Nucleotide excision repair
cne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CNG02470
03410 Base excision repair
CNG02470
03420 Nucleotide excision repair
CNG02470
03430 Mismatch repair
CNG02470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cne03032
]
CNG02470
03036 Chromosome and associated proteins [BR:
cne03036
]
CNG02470
03400 DNA repair and recombination proteins [BR:
cne03400
]
CNG02470
DNA replication proteins [BR:
cne03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
CNG02470
DNA Replication Termination Factors
ELG1-RFC complex
CNG02470
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
CNG02470
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
CNG02470
Check point factors
HRAD17(Rad24)-RFC complex
CNG02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
nSTAND3
AAA_3
Viral_helicase1
RCF1-5-like_lid
RuvB_N
Gp44_lid
Mg_chelatase
NTPase_1
MeaB
Rad17
AAA_19
AAA_assoc_2
DNAX_ATPase_lid
AAA_24
AAA_5
FtsK_SpoIIIE
RNA_helicase
SRP54
KTI12
AAA_30
AAA_28
NB-ARC
Motif
Other DBs
NCBI-GeneID:
3258699
NCBI-ProteinID:
XP_571983
UniProt:
Q5KDX5
LinkDB
All DBs
Position
7:join(702938..703020,703076..703294,703342..703443,703498..703693,703743..704069,704127..704243)
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AA seq
347 aa
AA seq
DB search
MASGSSSNNKLISATAKHTDAEGYEMPWVEKYRPVLLDDIVGNSDTVDRLKVIAEDGNVP
HIIISGMPGIGKTTSIHCLAHALLGEAYKEGVLELNASDERGIDVVRNKIKSFAQRKVTL
PPGRHKIIILDEADSMTAGAQQALRRTMEIYSNTTRFALACNMSNKIIEPIQSRCAILRY
SKLNDAEVLKRLKEICDMESIKHNDEGLAALIFTAEGDMRQAINNLQSTWSGFGFVNQDN
VFKICDQPHPIVIRQMIKDCQHGKIDEALARVNALWDQGYSAVDIVVTVFRVVKGMEELP
EYLKLEFIREIGWTHMRVLEGVGTLVQLGAMIARLSKFTLPPNALKI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcatccggatcgtcatcgaataataaacttatctcggccactgccaaacataccgat
gctgagggttacgaaatgccctgggtcgagaaatatcgtccggtccttttggacgatatc
gttggcaactcagataccgttgatcggttgaaggtcattgcagaggatggtaacgtgccg
catatcatcatctctggtatgccaggtatcggaaaaaccacttctatacattgcttggcg
catgcgcttctaggagaagcgtacaaggagggagtattggaactgaatgcgtccgatgag
cgcggtatcgacgtagtcagaaacaagataaagtcgttcgctcaaagaaaagttaccctc
ccacctggaagacacaaaatcatcattcttgatgaagccgattcaatgacagccggtgct
caacaagcacttcgtcgaactatggaaatttactccaataccactcgattcgccctcgcc
tgtaacatgtccaacaagatcattgaacctatccaaagtcgatgtgcaattttaagatat
agcaagctcaatgacgccgaagtattaaagcggcttaaggaaatttgcgatatggagagc
atcaagcacaatgatgaaggcctcgcagcactcattttcactgctgagggcgacatgcgt
caagcaattaataatctccaatctacgtggtcaggttttggttttgtcaaccaagataac
gtattcaaaatttgcgatcaaccccatcctattgtcattcgccaaatgatcaaagactgc
cagcatggcaaaattgatgaggcccttgcaagagtgaacgcactctgggatcaaggatac
tcggcggtggatattgttgtaaccgtattcagagttgtcaagggcatggaggagttgccg
gagtacttgaagttggagttcatccgggagattggctggactcatatgcgtgtccttgaa
ggcgttggaacgctcgtccagctgggcgccatgattgctcgtctgagcaagttcactctt
cctccaaacgccctcaaaatatag
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integrated database retrieval system
