KEGG   Cryptococcus deneoformans JEC21: CNG03370
Entry
CNG03370          CDS       T00243                                 
Name
(RefSeq) conserved hypothetical protein
  KO
K12878  THO complex subunit 1
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03013  Nucleocytoplasmic transport
cne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNG03370
  09122 Translation
   03013 Nucleocytoplasmic transport
    CNG03370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CNG03370
   03041 Spliceosome [BR:cne03041]
    CNG03370
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     CNG03370
Spliceosome [BR:cne03041]
 Complex C
  Other components
   EJC/TREX
    CNG03370
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    CNG03370
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 3258585
NCBI-ProteinID: XP_572067
UniProt: Q5KDN0
LinkDB
Position
7:join(949161..949403,949476..949593,949657..950756,950820..951022,951095..951206,951271..951735,951790..951834)
AA seq 761 aa
MAIHQPLLEPLNSIVSAYPPQRSKPVPIPASELDTKLSQAWETYSNDPSLINGMAKNPDL
IRGVLELVGRELVVLSVINGQLSEPDETANEKEKVVFQTALKDRLDIILTLYETVHKAFQ
EIPFLEPGALFIPLLEELVELLSVGTWRSLWSYVESRSKRFTKDMPASRGKALPLLRTIN
AFLRFLPRTPEDLVFRGRIHQFASSVFSVADKSAINMRGDYSEVKTVWEEEPEMEKIKVE
EKEENKEGKMDERAEEGGKKDGDVEMEDAEKKDEHTEHSSNQPADQSMEQPTEDEPPLTP
AALQEPDFYSTLWSLQQYFSHPPSLDGPAVGSPPKTPFQTFREKSDFVLPQLFEQTRKEK
AMAGTDDGLGKKRKRQVMEGQDTGGFFHPRFLTGKRLFEYELADSSFRRQILVQYFILFQ
FLLNLTPAHAGKQAFTGGMPRTFMLEQADEQWVKSKIGGIKEELKNIVGGASFEDTVFSI
IRQEAHYVQWKNEGCPEGSFEIPALDPDSASEPAQAWAKRLNPPAPYNFKVGSRPLSMLW
NNGFTNINQLKRREKATTVEALDEEIKRIEEDEEDDKAMGQGTPEKLAANKERKTTSTWR
ALRLASHTSLKFFPSLKEKRDVHLLLSTIKKAQEPKGFARKEAGEGEKEGGEGENENPGE
GGELEDEDVQELKKEKEGEENEEKEKEDTENAEEKGPAELEKVEEEVKEEPIVDGTKVQE
VGEEKEEESDDKGSAEDVEMAEKEEQNVESKAYDEVEATVV
NT seq 2286 nt   +upstreamnt  +downstreamnt
atggcaatccatcaaccccttcttgaacctctcaactctatagtatcggcataccctccg
caacggtcaaaacctgtgcctatccccgcttccgagctcgataccaaactgtcgcaagca
tgggagacgtactcgaatgatcctagcctgatcaatggcatggcaaagaatccggatctt
atcagaggagtgctggaactcgtcggaagagagcttgttgtcctgagcgttattaatggc
caactgagtgagccagatgagactgccaatgaaaaggaaaaggttgttttccagacggcc
cttaaggataggctggatatcatcttgactttgtacgagactgtgcacaaggctttccaa
gaaataccattcctcgagccaggagctcttttcatccctctccttgaagagcttgtcgag
cttctctctgttggcacatggcggagtctctggtcttacgtggaatcccggtccaagcgg
ttcaccaaagacatgcctgcctcccgaggaaaggctttgcctcttttgagaactatcaat
gcctttctgagattcctgccccgaactccggaagatttggtgttcagaggaagaatacat
cagtttgcgagctcggttttcagtgtggcggacaagagcgcgatcaatatgagaggcgat
tattcagaagtgaagacagtttgggaagaggagccagagatggagaagatcaaggtggag
gaaaaggaggagaacaaggaaggaaagatggatgaaagggctgaagaagggggcaagaag
gatggcgatgtggaaatggaagatgccgagaagaaggacgaacacacagagcattcatcc
aaccaaccagcagatcaatccatggagcagccaacagaggacgagcctccattgacaccg
gctgcgctacaggaacccgacttttactccacactctggtcactccaacagtatttctcc
catccaccttctcttgacggcccagcagtaggctcaccgcccaaaacacctttccaaacc
tttcgtgaaaaatcagactttgtcctcccccagttatttgagcaaacgaggaaggaaaag
gcaatggcaggtacggacgatgggttggggaagaagaggaaacggcaagtcatggaagga
caggatacaggaggcttcttccaccctaggttcctgacaggaaagaggctttttgagtat
gagctcgccgactcctcattccgtcgccaaatacttgtgcagtatttcattctcttccaa
ttccttctcaacctcaccccggcccacgctggcaagcaagcctttacgggtggtatgccg
aggacgtttatgctggagcaggcggacgagcagtgggtgaagagtaaaatcgggggcatc
aaggaagaattgaagaacatagttgggggagccagttttgaagataccgtgtttagtatc
attagacaagaagcacattacgttcaatggaagaatgaaggatgtccagaaggctctttc
gagatccccgcacttgatcccgactctgcttccgagccagcgcaagcatgggcaaagcgc
ctcaacccgcctgcgccatacaacttcaaggtcggctcacgcccattatctatgctgtgg
aacaatgggttcaccaatattaatcagctgaagagacgagaaaaggcgacgacggtggaa
gcgcttgacgaagaaatcaaaaggattgaagaggatgaggaagatgataaggccatgggt
caaggcacacccgaaaagcttgccgccaacaaagaacgcaagacaacatctacttggcgc
gcccttcgtctcgcttctcatacatcactaaaattcttccccagcctaaaagaaaagcga
gacgtccatctgttgctctctacaatcaagaaggctcaggaacccaaaggtttcgcgcgc
aaggaagccggagagggtgagaaggaaggaggcgaaggcgagaatgaaaatcctggagag
ggcggcgagttggaagatgaggatgtgcaggaattgaaaaaggaaaaagaaggggaagag
aacgaggagaaagaaaaggaggatactgagaatgcggaagaaaaaggcccggccgaatta
gaaaaggtagaggaagaggtaaaggaggagccgattgttgacggaacaaaagtacaagaa
gtgggtgaagaaaaagaagaggaatccgacgataaggggtcagcagaggatgtcgagatg
gccgagaaggaggaacaaaacgtcgagtcaaaggcgtatgatgaagtagaagcaactgta
gtttaa

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