Cryptococcus deneoformans JEC21: CNH00270
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Entry
CNH00270 CDS
T00243
Name
(RefSeq) DNA repair-related protein, putative
KO
K22817
non-structural maintenance of chromosomes element 1 [EC:
2.3.2.27
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cne04121
]
CNH00270
03400 DNA repair and recombination proteins [BR:
cne03400
]
CNH00270
Enzymes [BR:
cne01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CNH00270
Ubiquitin system [BR:
cne04121
]
Ubiquitin ligases (E3)
Atypical E3
CNH00270
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
CNH00270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_Nse1
zf-RING-like
Baculo_IE-1
Exportin-5
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
3259004
NCBI-ProteinID:
XP_572220
UniProt:
Q5KC98
LinkDB
All DBs
Position
8:join(1108410..1108557,1108608..1108756,1108812..1108889,1108944..1109104,1109160..1109274,1109333..1109647,1109698..1109790)
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AA seq
352 aa
AA seq
DB search
MSRDAITNAAGTVESTLLHQVFIQSLLSRRVVSEAIALELYKRAVTAVRAYDRQFNPPYA
ISGHGVASFVTDVSTLLHSVSLEVIRTIDQRSDRAFFVLRNLDASEVASFATDLNSMEVE
YLRNLIESIVVSYPANSLAIGQARDVINDSPLTQHKMTKSHAESLLDALVSRGWLYKSKR
TRFSLGVRALAELETYLKNEFDQYVKSCAQCRRVVTEGLACSNVGCDCHIHNTCYARNIQ
QLANPVCPSCSSSFRDLAPKPVGEKAVSIMEDNFKGGRKRKGKGKNVGDMDDEGEEEEGG
SSEAEDELDERRESQSQTQNQGSIRRSYVPETQYDEEPSTGSAGPSKRIRRG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagacgctataacgaatgcggcaggtactgtcgaatcgactctcctccatcag
gtgttcatccagtcattactctcccgacgtgttgtctccgaagccattgcgctcgaactt
tataaacgcgctgtcacggcagtccgcgcctacgacagacagtttaatcctccgtacgct
ataagcggtcatggagtggcaagtttcgtgaccgacgtgtcgactttgctgcacagtgtg
agcttggaagtaattcgaactatcgatcagcgatccgatcgagccttttttgtgcttaga
aacctggatgcttcggaggttgcgtcatttgcaactgacctcaactcgatggaagttgaa
tacttacgcaaccttattgaaagtattgtcgtttcataccctgccaactcattggctatt
ggccaagcgcgtgatgtcatcaatgactctcctcttactcagcataagatgaccaagtcc
catgctgagagtctgcttgacgcattagtctctagagggtggctttacaagtctaagcga
acgaggttttcattgggtgttcgagcactcgctgaacttgaaacatacctcaagaacgag
tttgatcagtatgtgaagtcatgtgcacaatgtaggcgtgtggtgaccgaaggtcttgcc
tgctctaatgtgggttgcgactgtcacattcataacacttgctatgcccgcaacatccaa
caattagccaaccctgtctgcccaagctgttcatcgagtttccgtgatcttgcgcctaaa
cctgtcggtgaaaaagcagtatcgattatggaggacaatttcaaaggtggtaggaagaga
aaagggaaaggaaagaatgttggggatatggatgatgaaggtgaggaagaagagggtggt
tcttctgaagcagaggatgagttggatgagcgaagggaaagccagagtcaaactcagaat
cagggatcaataagacggtcttatgttcctgaaacgcagtacgacgaagaaccgtcaacc
gggagcgcaggaccttcaaaacgtattcgaagaggatga
DBGET
integrated database retrieval system
