Cryptococcus neoformans var. neoformans JEC21: CNH00280
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Entry
CNH00280 CDS
T00243
Name
(RefSeq) ATP dependent RNA helicase, putative
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNH00280
Enzymes [BR:
cne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNH00280
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Pre-60S particles
Helicases
CNH00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
3259037
NCBI-ProteinID:
XP_572221
UniProt:
P0CQ90
LinkDB
All DBs
Position
8:complement(join(1105537..1105661,1105720..1106497,1106547..1106668,1106730..1106914,1106966..1107093,1107143..1107621,1107667..1108168))
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AA seq
772 aa
AA seq
DB search
MAKIDKKTKLKLNKKSVRAPSKPTTEKKPKKYVTADTLTWKPVKTSSFSGIDGGGGMMML
EELEDVGIEWEETDGGRKIAKFVEVESKTSKGKKNAAQEEPNQEGRGDDEKASSASETEE
GKKADDKEAVEEDDEEEFPDFAGFAEEDLNAADEEEHPNLDDEPAFNDDLLPEWSSISLH
PSLKRSFLASSFTAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPILHYLLGQRKS
KAGIKRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSA
QKQKRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELES
IVKLTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQTFVFSATLSKDLQKNLKRRSRS
WKGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFL
LRYPGRSIVFVNSIDSIRRLLPLFTLLQLPVFPLHSHLQQKQRLKNLDRFKSNPKGILIA
TDVAARGLDIPQVDHVVHFNLPRTADAYIHRSGRTARAQNEGFALQLVSPDEKSVQRALM
KSLERTHELPDLPIEAGFLPSLRERLRVATEIEKAQHRATKATHDKNWLLEAAEAMDIDI
DPSMLDGEDDDPDAPYYKPKKQDRGKGKASVENLKMELKALLQEKLVARGVSIRYPTSGS
KVIVDDLIKSTGHGMLLGASTSKAYDQVEKTGKRKLGSGRPGAVKKKKVEGR
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagattgacaagaagaccaagctcaagctcaacaagaagtctgtgagagcccca
tctaagcctactacggagaagaagcccaaaaagtatgttacggccgacacgctcacatgg
aagcccgtcaaaacttcaagcttttctggcatcgacggtgggggcggtatgatgatgctt
gaggagctcgaagatgttgggattgagtgggaagagaccgatggtgggagaaagattgca
aaatttgtcgaagtggaaagcaagacgagtaagggcaagaagaacgccgcgcaagaggaa
cccaatcaagaagggcgaggagacgatgagaaagcctcttcagcaagtgaaactgaggaa
ggtaaaaaggccgatgacaaagaagccgttgaggaggatgatgaagaagagttccccgat
ttcgctgggttcgctgaagaggacctcaacgctgcagacgaggaggaacatcccaattta
gacgacgagcctgctttcaacgatgaccttctcccggaatggtcttctatttcccttcat
ccctccctcaagcgttctttccttgcatccagcttcaccgctcctactgccatccaatct
cgagccatccccgctggaattactggtcgagacgtcgttggtgtcgcggaaaccggttcc
ggtaaaacactcgcttattctttacccatcctccattatctccttggccaacgcaaatcg
aaagctggcatcaagcgccccttgtccgctttagtcctttgtcctacaagagaacttgct
ctgcaagtgatggaccatctcaatgccttgttgaaacatgcactcgccactccagatggg
gagaaaccgcaaggcccacctagagtcagcgttggctctgtcgttggtggtctaagtgcg
caaaagcagaagagaattttagagaggggatgtgatgtcattgttgcgactcctggccgg
ttatgggacctcatcaaggctgatgatgagctcgcgacgagtgtcaggacattaagattt
ttggttattgatgaggcggaccgaatgattgagaacggacactttgcagagttggagagt
atcgtcaaacttactcaacgttctaccgcccaacaaggccctgatgatgatgaccccgta
ttccaagctatggctactctctttgaagagtcaacggctagggaggacatgcagacgttt
gttttctccgctactctttccaaggatttgcagaagaacctcaagaggagaagcagatct
tggaaagggaaaggaaaaaggtcatctactcttgaggatttggtggagaagcttgatttt
agagatgagaaccccgaagttattgatttgtcccccgaaggaggtgtcgtttcctcattg
agggagagtatgatcgagtctacaaaggacgacaaggatctctatctctattatttcctt
ctccgataccctggcagatctatcgtctttgttaactctatcgactctatccgtcgtctt
ctcccccttttcactctcctccaacttcccgttttccctcttcactcccatctccaacaa
aagcagcgtcttaagaacctcgaccgattcaaatccaaccccaaaggtatcctgattgca
accgacgtcgctgcgcgaggtttggatatcccccaagttgatcacgttgttcacttcaac
ctgccccgaacggcggacgcgtacattcaccgatcaggtcgtactgctcgagcccaaaat
gagggtttcgcattacaacttgtgtctccggatgaaaagtctgtccagagggcattgatg
aagagccttgagcgaacgcatgagctacccgatctgcctatcgaagccggtttccttcct
tctcttcgtgagcgactgagagtggcgactgaaattgagaaggcacaacatcgagcgacc
aaagcaactcacgataaaaactggttactcgaagctgccgaggccatggatattgatatc
gacccttccatgctcgatggagaagacgatgatcccgatgctccttattataaacctaag
aagcaggataggggcaaaggcaaagcatctgtggagaatttgaagatggagttgaaggct
ttgttgcaggagaagcttgtcgcaaggggtgtgtcgatcaggtatccgacaagtggaagt
aaagtcatcgtggatgacctaatcaaatcaaccggtcacgggatgttgttgggtgcaagc
actagcaaagcttacgaccaagtggagaagactgggaagagaaaattaggatctgggaga
cctggagctgtcaagaagaaaaaggtggagggccgatga
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integrated database retrieval system
