| Entry |
|
|---|
| Name |
(RefSeq) hypothetical protein
|
|---|
| KO |
|
|---|
| Organism |
cne Cryptococcus deneoformans JEC21
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cne00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:cne03021]
CNH01780
Enzymes [BR:cne01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CNH01780
5.6.2.5 RNA 5'-3' helicase
CNH01780
Transcription machinery [BR:cne03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CNH01780
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
8:complement(join(620673..620687,620744..621226,621281..621521,621572..621934,621978..622092,622144..622865,622927..623142,623193..624713,624766..626045,626098..626543,626592..627205,627255..627598))
|
|---|
| AA seq |
2119 aa
MSSDNPRPEDVETLLAARRRVQEKPNTDALLPVYLYLLPQSNEASSGSSPLEDHWYCSRS
KSTLHIEAATYLIFLFAFQRQGTSKTWVDKLEVVLESCENCARSFGVARRRLESRYLSEW
PAHVRKNFFAAVDKWQSTFILNHSDKASDRGYGKPSSTEPALYSLSQPIVQLLLGEPSLL
SDPGVNSLYQDAFQSTLPAPTSLTALGMTPIHARLLSSSEPAQNRWSAAQLPALARRPIR
FSEWCNLGIGSEIQDLYNDGALDGEKRWQNVAAILNNKVLDQETVEKGLLGGQLETDSRG
RKGRGVMSVLSGLLSSDIPYLESVISCLATLLHTSPTRYIWSFDTSPDLPHTLISELRTN
PAFNELLETRYPSPLDSEADGHSAHGNGSNKSKGRRKPDTNPLDWLGDYLLSVADTEKGL
VTQVGEEKGSGMAFAEALAVTTNMVFQELQHGRLSNELRATAASAGFEAILRVYQTLIAE
DVSVNTAISSTLDLHSSFITTVAFRSKNHPLPAWCEARSSARALLTTIFQADARSTIHSL
LTMAAVAHEERKRQQKKRRTKSDVAVGPAKKVDHLPLASVRKDLWSMAYDALSPNDAAGA
AILLKSLAPFSHIELLDRQASWYHHGLEEAVKKEDWVAAIRAINTAIKATRESFPRAIES
LASQADPSGVRSLWKEQGVAKAATILLLSPDDEIHTPIISIIQQSFDDVDDRGDCFRALL
QHYPDTAVDGLNDFLRTFIETARITPESCSLAKWLVRCFHDVLEVLCRPSGVLGPLLQSD
DFLTSFADGRSMRKRLEELWHLMTTSLALIFKRTLDWAPHFENEVMVDWMRDALIFGRQM
TDHIRAFEAAVLGSSARGSETMSESSARQSLVGKKMTKQLELVLSDLILWLRLTDIETLF
QTHQLIKTILGRISKSTTDVSKNPTLEKTLLDIDKFCRKGSRSFTSRLSDDLLSELSDLL
EPFNLVDDSEVQFVKEVKPKSSSDVGTSRESTSNISTPSTSKAPVRNAFTEMMKASGGKL
ASSSKTSTSTAKSKLPTPNDVVDVDDFDDDFLSNISASDLDLIEKRAILKESARQAPPKP
SIQSRLSTSARPHMPSSKLHVDLTYKVPPKPAPSFQSKVMQDIRREHYASIHERKRLEAG
QVAPKLPTASALGSGLGAYTGPPKPRVVEPVDSGSSASDSSDDERAAMKGLLSKQKSPAK
PVRPVVEKRSIKVLGDPIAEIHRRNEDRRAKAHATKMRLKPDLSPLYRYILSWDPDHQGP
SPPYGTKFAAELSDMRVVPTTFDSPRQYERIMLPLFLQELWSQCANDQVQVGPVIPVEVA
SRQYEDDLVEIDLMVIGAGDFYCNDSDLVTLRQPSNPKGIFAKIMGFKKHPKGSMIRARI
MSAMDQKELCGKSKWQLRKHVSLSTSIREFAALKGLPWYESSLLSDILAGRSAVMPKLST
QRIEDTMKCLSLNEPQAKAVLGALEVRGFALIQGPPGTGKTKTISGLVGKWMSERRVPIS
VDGQPPVKPKLLVCAPSNAAIDEVCKRLILGVPNPDGGQYNPNIVRVGIDASVNIAVKDV
SLDSLVEALISNSSGRNVGGEYGRIQAELDDVKQQIKDKQEAIKLAQDHDEKRKVLEDEY
HALITRRTQLGQASSKAKDAARDATRHLDGARRAARDQILKDADIICATLSGAGHDTLAA
HTFETVIIDEAAQAIEMSCLIPLKYGCKRCVMVGDPNQLPPTTFSTNAEKLQYNKSLFVR
MTKRDASHVQLLSIQYRMHPFISELPSKVFYHGQLKDGPSMAKKTAAIWHQRNIFGPYRF
FNVEGTEMKTGTSTKNPAEALAAVELYRRLSADFGTRVNLAMRVGVISMYREQLWELKRK
FTEAFGSAILELVEFNTVDGFQGQEKDIIILSCVRSGPNLSHIGFLKDTRRMNVALTRAK
SSLFIFGNGPTLERSDERWKIIVQDARDRGFFVNYDSTTFNTAFLEPPPSVKKKASATSK
SKASPGASKSTTMPDGLLPPKDLAADISTPSKVKREASVELAKEKKKKRKMSDGSSRAEE
SNSNVAVATSKPTSRLSSGSTLPSVKHAEDSPQPSSSKPPLPRIPRPPQSSTASKMTRPP
PPPPEDVLFIKKKKKRLNK |
|---|
| NT seq |
6360 nt +upstreamnt +downstreamnt
atgtcctctgataatccacgtccggaggacgtcgaaaccctcctcgctgcaaggcgcaga
gttcaggagaaaccaaatacggacgcccttcttccggtctacttgtacttgttaccccaa
tcgaatgaggcgtcgtctggctccagccctttggaggaccactggtactgcagcaggtcc
aagtccactctccacattgaggccgccacatatcttatattcctctttgccttccagcgt
cagggcacttcaaagacttgggttgacaaactagaggtcgttctcgaatcatgcgagaac
tgtgctaggagctttggggtcgcgaggagacgtttagaatctagatacctctctgaatgg
ccagcacatgttcggaagaatttctttgccgctgttgataagtggcaaagcactttcatt
ctcaaccattccgataaagccagtgacagagggtatggaaagccaagttccactgaacct
gcgctctactctctcagtcagcctatagttcagttgttattgggtgaaccgtcgctgtta
tctgatcctggcgtcaacagcttatatcaagacgcctttcaatcgacacttcctgcgcca
acatcacttaccgctcttggaatgacccctatacatgctcggctactttcctcctcggag
cctgcgcaaaatcgttggtctgcagcccaactgccggctcttgcccgtcggccaattcgg
ttctcagaatggtgcaatttaggaatcgggagcgagatccaagatttgtataatgatggg
gcgctcgatggagaaaaacggtggcaaaatgttgcagcaattctgaataataaggttctc
gaccaagaaactgttgaaaaaggccttttgggtggccagctggaaactgactcgcgaggg
agaaaggggagaggagtgatgtctgtgctgagtggccttttgagtagtgacattccttat
ctggaatccgtcatttcctgccttgctactcttctgcacacttcaccgacgcgatacata
tggtcattcgatacttcccccgatcttccgcatacccttatatcagagcttcgaacaaat
ccggcattcaacgaacttctcgaaacccgttatccctcaccgctcgattccgaagctgac
ggccatagtgctcatggcaatggcagcaacaagagcaaagggcgacggaagccggataca
aacccattggattggttaggggactatctgttgtctgtagcagacacagagaaaggattg
gtcactcaagttggtgaagagaaaggatctggaatggcatttgccgaggctcttgcagta
accaccaatatggtcttccaagagctccagcacggtaggctttcaaacgaattacgtgct
acagcggcttccgctggatttgaggcaatccttcgagtttatcagacactgattgcagaa
gacgtgtccgtgaataccgccatctcctccacactagaccttcactcctcgtttatcaca
accgtcgctttccgctcgaagaaccatccccttcctgcatggtgtgaagcccgtagttct
gctcgtgctctcctcaccactattttccaagcagacgctcgatctacaattcatagttta
ttaacaatggcggcggtcgcccacgaagaaagaaaacgtcaacagaagaagagaagaacc
aagtccgatgttgctgttggtcctgccaaaaaggttgaccatctaccacttgcatccgtg
cgaaaagatttgtggtccatggcttacgatgcgctgtcacccaacgatgctgcgggtgct
gctatcctgctcaaatctctcgcacccttctcgcatattgaattacttgacaggcaagct
tcgtggtatcaccatggtctagaagaagcagtaaaaaaggaagactgggttgcggcaata
agagcaatcaatactgccatcaaagctacacgtgaatctttccctcgcgctatcgaatct
ttggccagtcaagcagatccttccggtgtcagatcattatggaaggagcaaggagtagcc
aaagctgcgaccatccttctcctgtctcccgacgatgaaatccatacgcctatcatcagt
atcattcagcaatcttttgatgacgtcgacgatcgaggggactgtttccgtgctctcctc
cagcactatcctgatacagctgtagatgggctcaatgactttttgcgtactttcattgaa
actgcaaggatcaccccagaatcatgttctttagcgaaatggcttgttcgttgctttcac
gatgtgcttgaagtcctctgccgaccatcaggggtattaggaccgcttctccaatcagac
gatttccttacttcctttgcagacggtagaagcatgcgaaagagattggaagagctttgg
catctgatgacgacgtctcttgcgctcatcttcaaacgtacccttgattgggcgcctcat
ttcgagaacgaggtaatggtagactggatgcgggacgcgcttatctttggccgacaaatg
actgaccatattagagcttttgaggcagcagttttgggatcgagtgcaagaggtagtgag
accatgtcagagtcttcggcaagacaaagtctagtggggaaaaagatgacgaagcaatta
gaattggtgttgtcggatcttatcttatggctcagactgaccgatattgaaacattgttt
cagacacatcaactaatcaaaaccatcctgggaaggatcagcaagagcacgacagacgtt
tccaaaaaccccacccttgagaagaccttgcttgatattgataaattctgtcgcaaaggc
tctcgaagttttacaagtcggctctctgatgacttgctttccgagctttctgatcttctc
gaaccgtttaatctggtcgatgattccgaagtgcagtttgtcaaagaagtcaagccgaag
tcgtcatcagatgtcggtacctcgcgcgagtctacttcgaatatcagcacgccctcgacg
tctaaagctccagttcgcaatgcgttcactgagatgatgaaagcgtcaggtggtaaactg
gcatctagcagcaaaacatcaacgtcgactgcgaaatcaaaactacctacgcccaatgac
gttgtagacgtcgatgactttgacgacgatttcctcagcaatatttcagcatccgatctt
gacctcatagagaaacgggctatcctgaaagaatccgctcgtcaggcgcctccgaaaccc
tcgattcaatcgagactttccacatctgccagacctcatatgccctcaagcaaactgcat
gtcgacctgacgtacaaggtgccccccaaacccgctccttctttccagtcaaaggtgatg
caggacatccgcagagaacattatgcttccatacatgaacggaaacgattagaagcaggg
caagtcgcaccaaagttacctacggcgtctgctttaggtagtggactcggggcttatact
ggtcctcctaagcccagagtggttgaacctgtagacagtggctcgagtgcatctgattca
tcagatgacgagagagccgcgatgaagggtttactctctaagcaaaagtcaccagcgaaa
ccagttcggccagttgttgagaagagatccatcaaggtgctaggtgaccctatagctgaa
atccatcgacgaaatgaagaccgaagagctaaggcccatgctaccaagatgaggctgaag
ccagacctcagccctctttaccgttacattctctcatgggatcctgatcaccaagggcca
tcacctccctatggaacgaaatttgcagcagagctatcagatatgcgcgtagttccgaca
acatttgatagtccaagacagtacgagcgcatcatgcttccattgtttttgcaggagctt
tggtcgcagtgcgcaaatgaccaagtacaagtgggacctgtcataccagtagaggtcgca
tcaaggcagtacgaagatgatttggtagaaatcgatctcatggttatcggggcgggagat
ttctactgtaatgactctgaccttgtcacactccggcaacccagcaatcccaaaggcatc
tttgcaaaaatcatgggattcaagaaacatccgaaaggctcgatgattagagcacgtatc
atgtctgccatggaccaaaaagaactttgcgggaagtccaagtggcaattgcgcaagcac
gtctctctaagcacttccattcgagagttcgctgccttgaaaggtctaccatggtatgaa
tccagtcttttgtcggatattttggcaggacgaagcgctgtcatgccgaaattatcgact
cagagaattgaggatacgatgaagtgtttgagcctgaacgaaccgcaggcgaaggccgtt
cttggggctttggaagtcagagggttcgcacttatccaaggccctccaggtacaggtaaa
acaaaaactataagtggtctggtgggcaaatggatgtctgaacggagggtaccgatctca
gtcgatgggcaaccccccgtcaagcccaagttgctggtatgcgcccccagcaatgccgct
attgatgaagtctgcaaacgactgatcctcggagtgcccaaccctgacggtggtcaatat
aatccgaatattgttagggtgggtattgacgcttcggtcaatatcgccgtgaaggatgtg
tcattagacagccttgtcgaagcattgatcagcaatagttcaggaagaaacgttggaggg
gaatatgggaggattcaagcggagctggatgatgtcaagcagcagatcaaggacaagcag
gaggcgattaagctggctcaagatcatgacgaaaagcggaaggtcctggaagacgaatat
cacgccctgattactcgccgtacacagcttggtcaagcatcctccaaagcaaaggacgct
gccagagacgcaactcgccatctcgacggtgctcgacgtgcggctagagatcagattctg
aaggatgctgatatcatctgtgctactctctccggtgcaggccatgatacattggccgcc
cataccttcgagacagtaatcattgacgaagctgctcaagccatagaaatgagttgcctg
atccccttgaaatacgggtgtaagcggtgtgtcatggttggagatcccaatcaattaccc
ccaactacattcagtaccaacgctgaaaagcttcagtacaataagagtctgttcgttcgc
atgacaaaacgcgacgcctctcatgttcagctattaagcatccaatatcgaatgcatccg
ttcatctcggaacttccctcgaaggtgttctatcatggtcaactcaaggacgggcccagt
atggcgaagaagacggcggctatctggcatcagcgaaacatctttggtccatatcgattt
ttcaatgtcgaaggcacggaaatgaaaacgggcacatccaccaagaatcctgcggaggct
cttgctgcagtcgaactatatcgtcgtttgagcgccgatttcgggacgagggtgaatctc
gcaatgagggttggagtgatctcaatgtacagggaacagttatgggagttgaaacgaaag
ttcactgaggcctttggttccgcaattttggaactcgttgaatttaacactgtcgacggt
ttccaaggccaagagaaagacatcatcatcttgtcttgtgttcggtccgggccaaatctg
agccatattggtttcctgaaagacaccaggcgaatgaatgtcgcactcactcgtgccaag
agttcgttatttatctttggaaatggacctactttggagcgaagcgatgaacgatggaag
attatcgtccaggacgcaagagacagaggtttcttcgtcaattatgattctactacattc
aacacagcattcttggagcctccgccttcagtcaagaaaaaggcatctgccacctccaaa
tccaaggcttccccaggagcatccaagtctacgaccatgcctgacggcttgctacctcca
aaagacctggctgctgacatatcgaccccttccaaggtcaagcgagaggctagcgttgag
ctggctaaggagaagaagaagaagcgaaagatgtccgatggctcatcacgagctgaggaa
tcgaattctaatgtagctgttgccacgagcaaacctacttctcgattatcctctggatct
accctgccctctgtaaaacatgccgaagatagcccacagccttcctcctccaaaccgccg
ctacccaggataccgcgccctccacagtcgtctaccgcctcgaaaatgacacgaccccct
ccgccgccgcccgaggatgtgctctttatcaaaaaaaagaaaaagcgactcaacaagtaa |
|---|
