KEGG   Cryptococcus neoformans var. neoformans JEC21: CNH02010
Entry
CNH02010          CDS       T00243                                 
Name
(RefSeq) transcription activator snf2l1, putative
  KO
K11654  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    CNH02010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNH02010
   03036 Chromosome and associated proteins [BR:cne03036]
    CNH02010
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase I system
   Other transcription-related factors
    NoRC (nucleolar remodeling complex)
     CNH02010
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    CNH02010
   RSF complex
    CNH02010
   WICH complex
    CNH02010
   B-WICH complex
    CNH02010
   NORC complex
    CNH02010
   BRF complex
    CNH02010
   NuRF complex (fruit fly)
    CNH02010
SSDB
Motif
Pfam: SNF2-rel_dom SLIDE HAND Helicase_C ResIII DEAD HDA2-3 CHDII_SANT-like DBINO AAA_14 DEAD_2
Other DBs
NCBI-GeneID: 3259282
NCBI-ProteinID: XP_572375
UniProt: Q5KCR8
LinkDB
Position
8:join(560995..560997,561051..561161,561285..561413,561549..561671,561727..561801,561857..561936,561985..562082,562132..562232,562283..562746,562797..563101,563159..563347,563404..563572,563629..563813,563867..563939,563999..564158,564211..564751,564805..565069,565128..565251,565310..565405)
AA seq 1096 aa
MNPLLAASSAANPNNTSVDDDKLSDYVPNSRDLSVSRAPSVIASEDAGHLDTAPQTPEPE
EDEEDEIPEDELNEEELMDGKKITPSAAKRAAQASAKKAQTAERKAQHAEIGKKRSAIEQ
ARFADSMKRFNYLLGQTELFQHFIDLKRQREPQFAQMLDEQIAKQAGKGKKKAIDNRHRK
SEKEEDEELLKDEEEDEPFVFEESPAYVKGGKMRDYQVQGLNWMVSLHHNGINGILADEM
GLGKTLQTVAFIGYLKFHLGIPGPHLIIVPKSTLDNWAREVAKWVPGFDVVVLQGTKEER
GELISRRILTQDFDVLITSYEMCLREKSTLKRFSWEYIIIDEAHRIKNVDSLLSQIIRTF
VSRGRLLITGTPLQNNLQELWALLNFILPDVFSSSEDFDAWFKTKDEADPDAVVKQLHKV
LRPFLLRRVKADVEHSLLPKKEINLYVGMTEMQRKWYKSLLEKDIDAVNGMTGKKEGKTR
LLNIVMQLRKCCNHPYLFDGAEPGPPFTTDQHLVDNAGKMVILDKLLKSMKAKGSRVLIF
SQMSRMLDILEDYCQFRGHQYCRIDGSTAHEDRIAAIDEYNAPESEKFVFLLTTRAGGLG
INLVTADIVVLFDSDWNPQADLQAMDRAHRIGQTKQVYVFRFITQDAVEERILERATQKL
KLDQLVIQEGRAQQTAKVAQNKDDLLDMIQHGAEKIINNKESMLIDDDIDEIIRRGEERT
KEINSKYAGLDLDALNNFKSESLVNTWEGEDYGNRQQKRPLLWIEPSKRERKTNYSVDQY
YRDSLKTGGPKADKPKVARAPKQVVVNDFQFYPPRLAELQNKETDWHRKSINYQVPVREP
EEGETQEQVEAEQKEEQERIDNAVPLSEEEVAEKETLVGEGFHDWQRRHFQSFIRALEKY
GRDDLEKVVTDVADRTEDEVREYAAVFFERYKELKDWERIMDRIRAGEEKIKEQQDRIDV
LHRKIKATRFPLQELKIVYGQNKGKAYSDEEDRFLLVRMHHHGIDRDDCYELIKRDIGEW
PLFRFDWFFKSRTPDELRRRAQTLLLCIMKEDDKVEDEKKPIKGKKRPIDELKSGPGSRD
TTPSAAGSKGSKKKKV
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgaaccctctattagcagcctccagcgctgcaaaccccaacaacacttccgtggacgac
gacaagctgtcagactatgttcccaactcacgcgatctgagcgtttctcgcgctccttct
gtaatagcttccgaagatgcaggtcatctcgacaccgcaccacaaacacctgagccggag
gaagatgaggaggatgagattcccgaggatgaattgaacgaggaggaattaatggatgga
aagaagatcacaccttctgctgccaagcgtgctgcccaggctagtgcgaaaaaggcgcaa
acggcagaaagaaaagctcagcatgcggaaatcggtaagaagcgaagtgccattgagcaa
gcaaggtttgcggactctatgaagagattcaactatttacttggacagaccgagcttttc
cagcactttatcgatctcaagcgccaacgagagccccagtttgcgcaaatgctggacgag
cagattgccaagcaagcgggtaagggtaaaaagaaggcaatcgataaccgacaccgcaag
tctgaaaaggaagaagatgaagaacttttgaaggatgaagaagaggatgaaccgttcgtg
ttcgaggagagtccggcgtacgtcaagggcggcaagatgcgagattatcaagttcagggc
ctaaactggatggtttctctgcaccacaacggtatcaatggtattcttgctgatgaaatg
ggtctcggcaaaactttgcaaactgtcgctttcatcggatatctcaaattccacctaggt
atccccggacctcacctcatcattgtccccaaatctacactcgacaactgggctagagaa
gttgccaagtgggtcccaggattcgatgtcgttgtgctccaaggcaccaaggaagagcga
ggcgaactcatctcaaggcgtatcctcactcaagactttgacgttctcatcacgtcatac
gaaatgtgtcttcgagaaaagtctactctcaaacgatttagctgggagtatattatcatt
gacgaagctcatcgtatcaagaatgtcgactcccttctttcgcagattattaggacgttc
gtcagtcgtggaaggttactgattaccggtacaccattgcaaaacaatttgcaagagctg
tgggccttgttgaactttatcttgcccgacgtcttctcttccagtgaggacttcgatgcc
tggttcaagaccaaggacgaagccgatcccgacgccgttgtcaagcaactccacaaagtc
ctccgacctttcctgcttcgacgagtcaaagccgatgtcgagcactctctcttgccaaag
aaggagattaacctttatgtcggtatgactgagatgcagaggaagtggtacaagagtctt
ctggagaaggatatcgatgccgtcaacggtatgactggtaagaaggagggcaaaacgagg
ttgttgaacattgttatgcaactccgaaaatgttgtaaccacccatacctctttgatggc
gccgagcccgggccgccttttaccaccgatcagcatcttgttgacaatgctggtaaaatg
gtcattcttgacaaactcctcaaatccatgaaggcgaagggttctcgggttctcatcttt
tctcaaatgagtagaatgttggacatcttggaggattactgtcagttccgtggacaccag
tactgccgtattgatggtagtaccgctcatgaggaccgaatcgctgcgattgacgagtac
aacgcccctgagagtgagaaattcgtattccttcttactacccgagctggtggtttgggt
atcaaccttgttaccgccgacattgtcgttctctttgattcagactggaaccctcaagcc
gatttacaagctatggacagagctcaccgtattggtcagacaaagcaagtctacgtcttt
aggttcatcacgcaggatgctgtagaggaacgtatccttgaacgagccacacaaaagctc
aagctggatcagcttgttatccaggagggcagggcacagcaaactgctaaagtggcccag
aacaaggatgacttgcttgacatgattcaacatggcgcggagaagattatcaacaacaag
gagagcatgttgattgatgacgacatcgatgaaattattcgacgaggagaggaaaggacc
aaggagattaacagcaaatatgccggtctcgaccttgacgctttgaataacttcaagtct
gaaagtctggtaaacacctgggaaggcgaggattatggcaacaggcaacaaaaacgtccc
cttctttggattgagccttccaaacgagagcgaaagaccaattattctgtggatcagtat
taccgagactctctcaagactggagggcccaaggcggacaaacccaaggttgctcgtgct
cccaagcaggtcgtcgtcaacgacttccagttctatccccctcgtcttgcggagctacag
aacaaggagaccgactggcacaggaagagtatcaactaccaagtacctgtgagggaacct
gaagaaggagagacacaagaacaggtggaggctgagcaaaaggaggaacaggaaaggatc
gacaatgccgtccccctctcggaagaggaagttgcagaaaaggaaactcttgttggtgaa
gggttccacgactggcagcggaggcatttccagtctttcatcagagcattggaaaagtac
gggcgagatgatctggaaaaggtcgtgaccgatgttgcggaccgaacagaggatgaagtc
agggagtatgcggctgtcttttttgaaagatataaggaactcaaggattgggagaggatc
atggaccgtatccgagcaggtgaagaaaagattaaggagcagcaagaccgtatcgatgtc
ctccatcgcaagatcaaagctactcgtttccctctccaggaactcaagatcgtctacggt
caaaataaaggcaaggcttatagcgacgaagaagaccgattcttgcttgtgaggatgcac
caccacggtatcgatagggacgactgttacgaattgatcaagcgagatattggggaatgg
ccacttttcaggtttgactggtttttcaagagtcggactcctgatgagctcaggcgacgg
gctcaaactttgttgttatgtatcatgaaggaagatgataaggttgaggatgaaaagaag
cctatcaagggcaagaaacgtccgattgacgagctcaaatctggtccgggatcaagagac
accacaccaagtgcagccgggtcaaagggtagcaagaagaagaaggtgtag

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