Cryptococcus deneoformans JEC21: CNH02180
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Entry
CNH02180 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNH02180
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CNH02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TTI1
HK97-gp10_like
Motif
Other DBs
NCBI-GeneID:
3259053
NCBI-ProteinID:
XP_024513362
UniProt:
Q5KCT5
LinkDB
All DBs
Position
8:complement(join(515005..515047,515105..515339,515396..515561,515615..515779,515827..520683,520739..521375,521439..521987,522036..522124,522179..523276,523324..523458))
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AA seq
2657 aa
AA seq
DB search
MEEPPQKRFKYTSYTDQIKNIALDTGNKRGLAWETEQYNEDTEQTNTPLTAQLDRLSLLD
LTVPYQDLQRALLPLTNTLPITLHNLPEIQKIFHEFYAKLDDGQEHIHSGLDSTLYLHQA
LYETCLSEALAYVPETAKDLLRVGALRALDPKLVERTYSTLSLILRTMAFSLLKPNEANR
STLKETWITINPFLSPKSNKRYVRRCVADAWVGVIRKARSEGLARLMELLMEDNVDGMEA
VWAHSLKGSSGQLHSRALTIYTILLDNLVKNPSPQQTITLGQVSTALVHHASASVVQPVI
ELVINKLESDTITLPSSTAVLNVLSTFLFTRKGKRFPETTLKPLMQKFLSLVPKLATDAA
VNEDMDKGEAEIKEQWRKTLVICIVGSLQAGQLAQWLSPGVTLIDSLWQKLNDRECFSFV
NALIALKWTGIEQFILSHVAKASLPSLNSDPLSTLILLNNLAASGYLSGGLSNVQGGRWR
QALISAIVGLLKPLTKSNLDLNERRITGQVLKLLPALPSDADKFAPQVVKILESALDRLD
SKGLEVIKTEWEEGGAWNDTHLVGSLLRTADQLIASPKADVSKDAKDLLVGKGWLSKILE
KWYWNKEVMESVVPHVERWATNLGLSHDVILEQFMPNLISSDSTLRLSSLQILAAVAPGT
ALAPDSEENTTSLREIYNLCVQIESSEMTLRNVRERTTNISRLTRSISALPVPLPTLVLK
GIVTYLVAQFKVNFRPVYPETIAALSTLTEKHKEEVWEIVWTELERTNNSKEAVTPDLDA
KYPDWAEERGSNEDRVEKDEEEAEFRCPNLEKSKVVFSRVWGQRSQEEKLDQQEISVQVS
HDKLDVLNYESQLLATLAAIPSVAEKHSRLIIPVVFSVARQGTSDQGDEVQSATHLSTKQ
LQARTANYLELLTKFANPKAAFRSEELHNLYLDILSKGEPRLQGLALKCLMTYKSPKLTP
YEEPLENLLVDSKFRDELARLRLGVDSQDYALAARDSEATGTTRVVVIEPTHRDEALPVI
IRLLYGVITSRRGRSSNSQGQGARKQAVLSALNGCSESELGVLVDLMLEPFGSTVEDVGK
VPGRQQMGFLSLLTDVIRYLGPQLGSHWSRLVSTTISLVANAQERLTASDIVTEDANEGE
EGEGIEAEKGMAPLRNIRSIGLKRLVQFLRSPVTFDVNPYLPTIFKSIVSPRLDKLEVEN
TQAPSGTLDLIATLAGEPDLAKQLTALDDRTLPKTFACMTAVKVKPAVVLRVFDILESLL
PEEDDQEITKEVLLPHIRVLIDNIIGLVGSLKSSQNDDITRRLLGILSRLSTIVEDGTQA
QQLATLLAPMLRHKQTPEKAKTNILATLQRLYAISPDFADPSSKFFYQSYDLISSLFQTL
FFSTSRRALVSTLETFIAVDKSLEKSIKLVADLNAYSTRRLEEPDFDRRLSAYEEINDAE
IESLPSDIRAWLPILRTALFFLHEPEELSIRTNASAVLQKFITLIGDSSEGPYVEALQNI
ILPGLKRALKSKQELVRNEALLAIAHGVKTCEGVPELTEMRPLLAHGDDEASFFTNIAHI
QVHRRTRALRRLRDIIAEPTTVIRESSLTSIFLPLLEHVIAGATDVTDHHLINEAIQTVG
GLARELRWGKWYGLIGRYMKLGIGSGKTGQQKYYVRSVAAVIDGFHFELSEGMDVDKGDE
ERDEEKGDEEEEDEEVEKKEVEGASPEKITAILLNKLLPSLSRFVSGKDETDSAIRVPLA
LGIVKIAHALPRGSSDIEVLRVITNVAQILRSKDQDTRDITRETICKIAIYLGPEWLVRI
IKELEIALPRGPQKHVLAVTTHAILVQATTQAADRFINLDDAVELAVQVTAEVIWGESGK
DVATEGFKTKMREVRGATSRGFDTLQLLSQLVSPSKIGVVLAPLREVMHASQAVKPMQQV
DEALRRVSLGLNANSLLRPQELLSLCYSLISGNSSYLKAKRKMVRPTETPDAFKVVMKRD
IKKEDDFYPANAHKFVMFGLDLFVTAFRRGKFDFDDVDILARLGPMVNAVGNTLYSPATN
VLLLSLKATAAIARCPVPQVEPALHVFINNIFKIIKHAGGTAESEVAQTALKTLAVILRD
CKSSEVSENQLRYLIEVISPDLEEPERQSAIFTILRSIITRKFVVPEIYDLMERVSSIMV
TSQSTQVQELCRGSVMAFLLDYPQGKGRLKSQMTFFAQNLQYTYEAGRLSVMEVLFAVFE
KFSEGLIEEYAGMFFVALVVVRANDDSEKCRVAAGELLKLLWKRLDEADRAKMAEVIRSW
VAKRNENETLAGAAMGVLGLLVETGENGLEEVISVIEPVLSESAAKLQEAEEEDEIVDLD
YTLPHQTLSTTAKLVLATPSSSSALPWSDIVPHLLFPHDYVRYDTAKLVSNLFANGSEAS
AVCEMLGDELCLDIVRKGCLVLKGNRGDSGEWIVGSGKLADEIVKVLWNISKHWASLRVE
SADAGEEEAGDDHDVEEPTRNPLTWLMSRMSFLARHLIVNRPAPNSYQAQEPWSAPIMSI
LRFFAGITESLNKAQAVGFLLHILSPVYRILDEGGDLGQVEEKQVDDLRALATQIRDFVQ
EKTGTTAFSRKWEKLRQATQAKRLERREGRVKLAVTNPEKYAERKGKKVERAKEGKKRKN
IAFAEGRKTAGAKKRRQ
NT seq
7974 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacccccgcagaagaggttcaaatacacctcttacaccgaccagataaaaaac
attgccttggacacaggcaacaaacgaggcctcgcatgggaaacagaacagtacaatgaa
gacaccgaacaaacaaacacccctctaactgcccagctcgatcggctgtcgcttctcgac
cttacagtcccttatcaagacctgcagcgagccctgcttcccctcacaaacactcttccc
atcactctccacaacttgccagagatccaaaagatattccatgaattttacgccaagctt
gatgatggacaagaacatattcattcggggcttgactcgaccttgtaccttcatcaagct
ctgtacgagacttgtttgagcgaagctcttgcatacgtccccgaaacagccaaggatctt
ttgcgggtcggcgctttgcgagctcttgacccgaaactggttgagaggacgtattcgaca
ttatctcttattcttcgaaccatggcattttcccttcttaaacccaacgaagccaatcga
tcgacactcaaggaaacgtggattaccatcaatcccttcctcagccccaaaagtaataaa
cgttatgttcgcagatgcgtggcagacgcatgggtcggagtcatccggaaagccaggtcg
gaagggttagctcggttgatggaattgttgatggaagataacgttgacggtatggaagct
gtttgggctcatagtctaaagggcagttcaggacagcttcattccagagctctgaccatt
tatacaattttgctcgacaatcttgtcaagaacccaagccctcaacagactattaccctc
ggccaggtcagtactgctcttgtgcaccacgcctcggcctcggttgtccaaccggtcatc
gaactagtcatcaacaaactggagtccgacacaatcactctaccctcttcaactgctgtt
ctcaacgtcctctctaccttcctttttacccgaaaaggcaagcggttccccgaaacgact
ctgaagcctctcatgcagaaatttctcagccttgtgcccaagctggcaactgatgctgcc
gtgaatgaggatatggataagggcgaggcggaaatcaaagaacagtggagaaagactctt
gtcatttgcatcgtagggtcattgcaggctggtcagcttgctcagtggttaagccctgga
gtgacacttatcgacagtctttggcaaaagctgaatgacagggaatgtttttcttttgtg
aatgctttgatcgcgctcaaatggactggtatcgagcagttcatactctcccacgtcgca
aaggcatcacttccttccctcaactctgaccccctctctacactcatccttctcaacaat
ctcgccgcttctggatacctttctggtggactttccaacgtccaaggtggccgttggcga
caagccctcatatcagcgattgtcggcttgctcaaaccccttaccaagtccaatctcgat
ctcaacgagcgtagaataacgggccaagttttgaaacttttgcctgctttacctagcgac
gcagacaaatttgcgccccaagtcgtcaagatcctcgagtcggcattggatcgcttggat
agcaagggtttggaggtaattaagacggaatgggaggaaggtggcgcatggaatgacacg
catctggtcggttctcttttgcgcactgccgaccagcttattgccagtccgaaagccgac
gtgagcaaggatgccaaggatctgttggtgggcaaggggtggttgagcaagattctggaa
aagtggtattggaataaggaagttatggagagcgtggtgcctcacgtcgagagatgggcc
actaatctaggtctctctcatgatgttattcttgagcaattcatgcccaacctcatctca
tcagactctacacttcgtctttcttcactccaaatccttgctgccgtcgctcccggtacg
gcgctcgcacctgactctgaagaaaataccacctcccttcgagagatttacaatctctgc
gttcaaatcgagtcttccgaaatgacactgcgcaacgtccgagaaaggaccaccaacatc
tctcgattgactcgatccatctctgcactgccagtgcctttgcctacactcgtcttaaag
ggtatcgtaacctacctcgtggcgcaattcaaggtcaacttccgcccagtctatcccgag
acaatcgctgcattgtcgacacttacagagaagcacaaggaagaggtttgggagattgtt
tggacggaacttgaacgcaccaacaattctaaagaggcggtcactcctgacctcgacgcg
aaatatcctgactgggcagaggagcgagggtcaaatgaggatagggtggaaaaggatgaa
gaagaagcagagttcaggtgccccaacttggaaaagagtaaagttgtgttcagtagagtt
tgggggcaaagaagtcaagaagaaaagttggatcagcaagaaattagtgttcaggtctcg
catgataaactcgatgtgctcaactatgagtctcaattgctcgctacacttgctgcgatt
ccatctgttgccgaaaagcactcccgtctcatcatccctgtagtcttctccgtagctcgt
cagggcacttcagaccagggtgacgaggttcaatctgcgacccatctgtcgaccaagcag
cttcaagcgcgcactgccaattaccttgaacttctcaccaagtttgcaaaccccaaggct
gcgttccgatcagaagagcttcacaatctttaccttgacatcctttccaaaggtgaaccc
agacttcaggggttagctcttaaatgcttaatgacttataaatcgcccaagctcacacct
tacgaggaacccttggagaacttgcttgtggacagcaagttccgagatgaacttgcccgt
cttcgactgggagttgacagccaggattacgccctcgccgctcgggattccgaagcaacg
ggtacgacccgagttgtggtcattgaacctacgcatcgagatgaagccctacctgtcatc
atcagattgttgtatggtgtcattacctctcgtcgagggcgatctagtaactctcagggg
caaggagcaaggaaacaggccgtgctcagtgctttgaacggatgttcggagagtgagctt
ggtgtactcgtcgacctcatgcttgagccctttggctcaactgtggaagatgttggaaaa
gtcccaggtaggcagcaaatgggtttcctctcacttcttaccgatgttatccgttacctc
ggtccccagcttggttcgcactggtcaaggctcgttagtaccaccatttcacttgtggcg
aatgctcaagaacggctgaccgcgtccgacattgtcacggaagacgcaaacgaaggcgaa
gagggcgaaggtattgaggcagagaagggaatggcaccacttagaaatatcagatcgatt
ggtctcaagcgcttggtacaattcttgcgttcgcctgtcacttttgacgtcaacccatat
cttccgaccatcttcaaatcaatcgtctcccctcgacttgacaagctcgaggtggaaaat
actcaagcaccttcaggaacccttgatttaattgccactcttgccggtgagcccgactta
gccaagcagttgaccgcattggacgacaggacgttgcccaagacattcgcctgtatgacc
gcagttaaggtgaaacctgcggtcgtgttgagggtctttgatatccttgagtccttgttg
cctgaagaggacgatcaggaaatcaccaaggaggtgttgttgcctcacattcgagtactc
atcgacaatatcattggtcttgttgggtctcttaagtcatcgcagaatgacgatataacc
cgtcgactgcttggtatcctttcgcgcctctcaaccattgtcgaagatggcacgcaagcg
cagcagctcgctactctccttgcgcccatgcttcgtcataagcaaacccctgaaaaggcc
aagacgaacatcctcgccacacttcagcgactttacgctatctcgccagattttgccgac
ccttcaagcaaatttttctaccaatcctacgatctgatctctagtctgttccagacttta
ttcttctccacatctcgtcgggctttggtcagcactctcgagacttttatagccgtcgac
aagtccttggaaaagtcaatcaagcttgttgcggatttgaacgcttactctacgaggaga
ctggaagagccagattttgaccgacgtctgtctgcgtacgaggaaatcaacgatgctgag
attgagagcttgccaagtgatatcagggcttggttacccatcctcaggacagcgctgttc
ttcttgcacgagcccgaagaattgtctattcgaacgaatgcctctgcagtcctgcaaaag
ttcattactctcatcggcgactcttctgaaggaccttatgtcgaggcattacagaacatc
attctccctggtctcaaaagggcactcaagtcgaagcaagagctggtcaggaatgaagca
ttgctggcgatcgctcacggagtgaaaacttgtgaaggtgttccggagctgacggaaatg
cgtccactcttggcgcatggtgatgacgaagcttccttttttaccaacatcgctcacatt
caagttcacagacgtactcgtgctctccgccgtcttcgtgatatcattgccgagcctact
accgttatccgcgaatcttcgcttacgtcgattttcctccctttgcttgagcatgtcatc
gcaggtgctactgatgtgacggatcatcatcttattaacgaggcgatccagactgttggc
ggtctggcaagagagcttaggtggggcaagtggtatgggctgattgggagatacatgaag
ttgggtatcggaagcgggaaaactgggcagcagaaatactatgtgaggagtgtagcggcg
gtgattgatgggttccatttcgagttgagcgagggaatggacgtggataagggagacgaa
gaaagagacgaggaaaaaggcgacgaagaagaagaggacgaggaagtagagaaaaaggag
gtagaaggtgcaagtccggaaaagatcaccgcgatccttctcaacaaattgcttccatcc
ctctcacgttttgtttctggcaaggacgaaaccgacagtgctattagggtcccacttgct
ttggggatagtcaagattgctcacgctcttcctcgcggctcttctgacattgaagtgctt
agggtgatcaccaatgtcgcccagattcttcgaagcaaggaccaggacactcgagatatc
acacgtgaaacaatctgtaagatcgctatctatctcggtccagaatggcttgtgcgaatc
atcaaggaactggaaattgcccttcctcgtggccctcaaaagcatgtcttggcggtaaca
actcatgcaatcttggtgcaagccaccactcaagcggcagacaggtttattaatctcgat
gacgctgttgagttggccgttcaggtcaccgccgaagtcatttggggtgaatcaggcaag
gatgttgctacggagggcttcaagaccaaaatgcgagaagtgcgaggagccacttcccga
ggctttgacactctccagcttctctcgcagctggtctctcccagtaaaatcggtgttgtt
ctcgcccccttgcgcgaagtcatgcacgcttcgcaggcggtaaagcctatgcaacaggtt
gacgaggctctccgacgcgtctcactcggtttgaatgccaactcccttctccgtccgcaa
gagttactttctctctgctactctctcataagcggtaactcttcctatctcaaagcgaag
cgtaagatggttcgccccactgagacaccagatgcctttaaagtcgtcatgaagcgagat
atcaagaaagaagacgacttttacccggccaacgcccacaagtttgtgatgttcggtctt
gatctgtttgtcactgctttccgtcgtggaaaattcgactttgacgacgttgatatcctt
gcccgtcttgggcctatggttaatgctgtcggtaacactctttattcccctgccaccaat
gttcttcttctttctctcaaagctaccgccgccattgctcgatgtcctgttcctcaagtc
gagcccgctctacatgtcttcataaataacatcttcaagattattaagcacgctggtggg
acagctgaatctgaggtggctcagacagctttgaagactcttgctgtcattttgagggat
tgcaagagttcagaagtctctgagaaccagcttcgatacctcatcgaagttattagtccc
gatctcgaagagcctgagaggcaatctgccattttcaccatccttcgatccatcatcacc
cgcaagtttgtcgtcccggagatctacgacctcatggagcgtgtctcatccatcatggtc
acatctcaatctacccaagtccaagaattatgtcgtggctcggtcatggcattcctactt
gactatcctcagggcaagggtcggctgaagtcccaaatgactttcttcgctcagaacttg
cagtacacttacgaagctggccgtctttccgtgatggaggttctctttgctgtgtttgag
aagttctcagaggggttgattgaagaatacgctggcatgttcttcgtggctcttgttgtc
gttcgagccaatgatgactcggaaaaatgtagagtagcagcgggcgagttactcaaactg
ctgtggaaacggctagatgaagcggatagagccaagatggccgaagttatcagaagttgg
gtggcgaaacgtaacgagaatgagacactagccggtgcagctatgggtgtgttggggtta
cttgtcgaaacaggcgaaaatggtttagaagaagtgataagtgtgatcgagcctgtcctt
tcagagagcgctgccaagcttcaagaagccgaagaagaggatgagattgttgatctcgac
tacacccttcctcatcaaacactgtccaccacagccaaactcgtacttgccactccttca
tcttcttccgctttgccatggtcagacattgttcctcatctccttttcccgcatgattat
gtccgatacgacacagccaagcttgtctccaacctttttgccaatggttccgaggcgagc
gctgtctgtgaaatgcttggagacgaactctgccttgatatcgtcagaaaaggttgtttg
gttctcaagggtaatcgaggagacagtggcgaatggattgttggtagcggcaagttggcg
gacgagattgtcaaagtcctgtggaatatttccaaacactgggcatctttaagggttgaa
tctgctgatgctggcgaagaagaggctggagatgaccatgacgttgaggagcctacccga
aatccacttacctggcttatgtccaggatgtcttttttggcccgtcacctcattgtcaac
cggccggcccctaacagttatcaagctcaggagccatggtccgccccaatcatgtccatc
ttgcgattctttgccggtattactgaaagtttaaacaaagcgcaagctgtgggattcctg
ctgcacattttgagccctgtatataggattctggatgaaggtggtgatctaggacaagtt
gaggagaagcaagtcgatgatttgcgagccctcgcgacgcagattcgcgactttgttcaa
gaaaagaccggcactacagccttctcacgaaaatgggagaagctgcgacaggctacacag
gccaagagattggaacgtcgcgagggacgggtcaagttggctgtaaccaaccccgagaaa
tacgcagagaggaaaggcaagaaggtcgagagggctaaggaaggaaagaagaggaagaac
atcgcctttgccgagggtagaaagactgctggggcgaagaaaagaaggcagtga
DBGET
integrated database retrieval system
