| Entry |
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| Name |
(RefSeq) histone deacetylase 1 (hd1), putative
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| KO |
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| Organism |
cne Cryptococcus deneoformans JEC21
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| Pathway |
| cne03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:cne00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CNH03520
03083 Polycomb repressive complex
CNH03520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:cne03036]
CNH03520
Enzymes [BR:cne01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
CNH03520
Chromosome and associated proteins [BR:cne03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
CNH03520
HDAC complexes
Sin3A-HDAC complex
CNH03520
BRAF-HDAC complex
CNH03520
REST complex
CNH03520
SHIP complex
CNH03520
MiDAC complex
CNH03520
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
CNH03520
Heterochromatin formation proteins
Other heterochromatin formation proteins
CNH03520
Chromatin remodeling factors
NuRD complex
CNH03520
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
8:join(93597..93941,93994..94111,94169..94243,94297..94408,94457..94625,94676..94768,94818..94926,94996..95071,95125..95208,95262..95351,95405..95553,95622..96067)
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| AA seq |
621 aa
MLSAQPPIDPSPPPSSSSSRRVAYYYDQDVGNYNYYLGHPMKPHRIRMAHNLIVNYGMCD
EEGQEHGPAEVWGEGKRAVNDEIAQNWGGGEMGDAEVKWEKAALRGSRSKTMQVFKPRRA
TKEEMTRFHTDEYIDLLEAVTPETADALTGGGTRCLIGEDCPAFDGLFEFCTISAGGSLG
AAERLNAGAADIVINWAGGLHHAKKTEASGFCYVNDIVLGILELLRIHPRVLYIDVDVHH
GDGVEEAFYVTDRVMTCSFHRFGEFFPGTGDVRDVGMKKGKGYAVNVPLRDGITDDSFQS
IFKPVIDRIMSHFRPSAVVLQMGADSISGDKLGGFNLTLEGHAECARFIKSFNVPVMMVG
GGGYTVKNVARAWTKETAIMCGVDLAEDLPYNQFLEYYGPRYKLEVLPTNAVDHNPPEYL
ERIKNQVFENLRSLPFAPSAQMRSVPSKTIGQVLGITDGGDEEPEDEIDQRIKKLLKRRR
ANVLDVDASSSSESETDTPAFSRPGRARRQGGNFSGRGRSSRLAQLQRNRERREAAQEAS
NEVEDDPCGVLGKKKRSFFKVVPKLNGVGVEPIDATGFGIGVVTNGLNGVGGLKDRLGIP
VVEQWKGDGIVSRGGTPASIA |
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| NT seq |
1866 nt +upstreamnt +downstreamnt
atgctgtccgcccagccaccgatagacccatccccacctccatcttcctcctcctctcgc
agggtagcatactattacgatcaggatgtgggaaactacaactactatctgggtcatccc
atgaagccccaccgaataaggatggcgcacaatttgattgtcaactacgggatgtgtgat
gaggaagggcaggagcatggccccgcagaagtatggggcgaaggaaagagggcagtgaat
gatgagattgcccaaaattgggggggaggcgagatgggcgatgcagaagtgaagtgggaa
aaggcggcgcttaggggatcaaggagtaagacgatgcaggtttttaaacctcgaagggct
accaaagaagaaatgactcggtttcatacagatgaatatatagacctgctagaggcagtt
accccggagactgcggatgctttaacagggggcggaacgaggtgccttattggtgaggac
tgtcccgcattcgacggtttattcgagttctgcaccatctctgcaggtggatcgttaggt
gctgctgaacgtctgaacgccggtgctgccgacattgtcatcaattgggctggtggtctg
catcacgccaagaagactgaagcaagtggtttctgctacgtgaatgacattgtgttgggt
attcttgagcttctcagaatacatccccgagttctctacattgatgttgacgtacatcac
ggagacggtgtagaggaagcgttctacgtaacggacagggtcatgacttgtagtttccac
cgatttggagaattctttcctggtacaggtgatgtcagagatgttggtatgaagaaagga
aaaggctacgccgtgaacgtcccactccgagacggtatcaccgatgacagtttccaatca
atattcaagcctgtgattgaccgtatcatgtcacacttccgacccagcgctgtcgtcctt
caaatgggtgccgattctatatcaggcgacaaactcggtggcttcaacctaactttggaa
ggtcatgcggagtgtgccagatttatcaagagtttcaatgtacctgttatgatggttggt
gggggtggatatactgttaaaaacgttgcaagggcttggactaaggagactgccattatg
tgcggtgtggaccttgctgaggacttgccttacaatcaattcttggaatattacggacct
cgatacaagcttgaagttttgcccaccaatgccgtagaccataatccccccgaatacctg
gagcgtatcaagaatcaagtgtttgagaacctccgaagtcttccatttgctccttctgct
caaatgcgttctgtcccaagtaagactattggccaggttttgggtataacggatggcggt
gacgaggaacccgaagatgagattgatcagcgtataaagaaactgttgaaacggcgccga
gccaatgtcctagatgtcgacgcctcttcatcttccgaatccgaaaccgacaccccagcc
ttctcccgtcccggacgagccagacgtcaaggtggcaatttttccggccgtggtcgctca
tcccgtctcgcccaactgcaacgtaaccgcgaaagaagggaagcagcgcaggaagcgtcc
aatgaagtggaagatgatccttgtggggtgttggggaagaagaagaggagtttcttcaag
gtggttcccaagttgaatggtgtgggagttgagccgatagacgcgacgggtttcggaatc
ggtgtggtgaccaatggactcaatggtgtaggaggattgaaggatcggttggggataccg
gtggtagagcagtggaaaggggacgggatcgtgtcgaggggtggtacgccagcgagtata
gcgtga |
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