Cryptococcus deneoformans JEC21: CNH03600
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Entry
CNH03600 CDS
T00243
Name
(RefSeq) pseudouridine synthase, putative
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cne03016
]
CNH03600
Enzymes [BR:
cne01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CNH03600
Transfer RNA biogenesis [BR:
cne03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CNH03600
Prokaryotic type
CNH03600
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
API5
Motif
Other DBs
NCBI-GeneID:
3259130
NCBI-ProteinID:
XP_024513409
UniProt:
Q5KD79
LinkDB
All DBs
Position
8:complement(join(70998..71623,71686..72105,72170..72604,72666..72846,72906..73518,73583..73911))
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AA seq
867 aa
AA seq
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MSAQENTQKRPAEDTEKQDVEAKRFKAEEIAPSNTPSLTDHLNAPHRTIPNPVSKMGLVP
AIPDLPPSLKMVTGIEADMVARRGFVGEEECGIRGFVGKGKGVRGVIKQRFTDFLVNEIG
LDGKVLHLKDITKPQEPGSNEKDKEAATVTEEEIANGQTKSTTEVASQSEEPEVAVDLPE
NLRFAAHPQWSTSTTLKLRPHFSDETIISLHQLVEQGKDAPPKGDSGWGGRKKDTESASE
ENAEREEEKKEEGEEAAFNDSASKGRGQGRDRGRGRGKERGRGRGGRGGRGGGRNADSGS
WWLTYEDEREVLSQPVISKEERAAAHKILREVFPGMFESSTREVKGEEGQRLVIKWSSGA
GQSSFHGKGARRAPDAPRLPAYIHFTLHKSNRETMDALSHLQRLLNVQAKDLTVCGTKDK
RAVTVQRVCLKRSGRNLQTVWRALNGVKQGWRTEQQAVEERGDRGVRVGDFEYSDKYLEL
GMLKGNRFLITLRNVEAESVEEIDRTMESVRDLGFINFYGMQRFGTSSMPTHVTGLFILR
SNWSAALDSLLFLREGEHPDCVAARLAWLEDGDYVKALEKMPRRAVAERSIWEFWKRGGR
MEDKVGALGVIPRNLRTMYVHAYQSYVWNLIVSERIKMSATEPLVGDLVIEKSDDDEPVD
PENVPAHRKDRHGRTKSWKTSSSPTVRRLTAEDITNKTHTIFDVVMPLPGFDVDYPGGEV
GELYDSILKADGLDKDRMRREQREYSLPGSYRLILLRPLSLTWTHLQYTDPDLPLVQSDE
DEILSLNPPAANDPEGKFRAVKVDMQLGASTYATMVLREITREETSSWFQRGRTMKGEDQ
EFKGIKKDDEGQGGEEGEGGEMELMNE
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccaagaaaacactcaaaaacgtccagcagaggacacggagaagcaggatgta
gaggctaagagattcaaggcagaagaaatcgccccctccaacaccccatctctcacagac
caccttaacgctccccaccgaacaatccccaacccagtatccaagatgggactcgtaccc
gccatcccagaccttcctcctagtctgaagatggtcactggtattgaagctgacatggtt
gctcgccgtgggtttgtcggtgaggaagaatgtggaatccgaggattcgtagggaagggt
aaaggtgtgaggggtgtgatcaaacagcggtttacggatttcctggtcaacgaaatcggc
cttgatggcaaggtgttgcatctcaaagacatcaccaagccacaagaacccggatccaat
gaaaaggataaagaagccgcgactgttactgaagaagaaattgccaatggccaaacgaaa
tccactactgaagtcgcatcccagagcgaagaacccgaagtcgccgttgaccttcccgag
aaccttcgttttgctgcccaccctcagtggagcacaagtactactctcaagcttcgtccc
cacttttcagatgagaccatcatctctctccaccaactcgttgagcaaggaaaagatgca
ccccccaaaggcgattccgggtggggcggaaggaagaaggataccgaatcagcaagtgag
gagaatgccgagagagaggaagaaaagaaggaggaaggggaggaagctgccttcaatgat
agtgcaagtaagggacgagggcaaggcagggatcgtggaaggggaagggggaaagaacgt
ggaagaggccgtggcgggagaggcggacgaggcgggggacgcaatgccgattcaggcagt
tggtggttgacatacgaagatgagcgcgaggttctctcacagcctgtcatttccaaagaa
gagcgtgcagcggctcacaagattctgcgcgaagtctttcctgggatgtttgaaagctca
accagagaagtaaagggcgaagaaggacaaaggctggttatcaagtggtccagtggtgcg
ggacaaagcagtttccacggcaaaggagctcgtcgggcacctgacgcgccccgtttaccc
gcctatatccactttactttgcacaaatccaaccgcgaaaccatggatgctctctcccac
ctccaacgtctcctcaatgtccaagctaaagacctcaccgtgtgcggtacaaaagacaaa
cgagccgtcactgtccagcgtgtctgcctgaaacgttcaggacgtaacctccaaacagtc
tggcgagcactcaacggcgtcaaacaaggttggcggactgagcaacaagcggttgaggag
agaggtgataggggtgtcagggttggagatttcgagtactctgacaagtatttggaattg
gggatgttgaaggggaatagattcttgattacattgagaaatgtagaggcggagagtgtg
gaggagattgatcggactatggagagcgtgagagatcttgggtttatcaacttttatggt
atgcagcgcttcggcacctcctccatgccaacccatgttactggcctcttcatcctccgc
tccaactggtctgcagccctcgattctctcctcttcctccgtgagggtgaacaccccgat
tgtgtagccgctcgtctggcgtggttggaagatggcgattacgtcaaggcattggagaag
atgcccagacgagctgtggcggagaggagcatttgggaattttggaaaagaggtggaaga
atggaggataaggtaggggctttgggtgtgatcccaagaaatttgaggacgatgtatgtc
catgcgtaccagagttacgtttggaaccttatcgtttctgaacgtatcaagatgtctgct
acggaacctcttgttggcgatcttgttatcgaaaagtcggatgatgacgagcctgtcgat
cctgaaaacgttcctgctcaccgcaaagaccgacacggccgcaccaaatcctggaaaaca
tcatcttcccccaccgtccgtcgcctcaccgccgaggacattaccaacaagactcacact
atcttcgacgtcgtgatgccccttcctggattcgacgtcgattaccccggtggtgaggtt
ggcgagctgtacgacagcatcctcaaagccgacggtcttgacaaggaccgtatgcgacgc
gagcaacgagagtactctcttcctggctcataccgccttatcctcctccgcccgctctca
cttacatggacgcatcttcagtacaccgacccagatttgccgcttgtccagtcggatgaa
gatgagatcctcagccttaacccgccggcggcgaatgatccggaaggcaagtttagggca
gtcaaggtggatatgcagctgggggctagtacatatgcgacgatggtgcttagggagatt
acaagggaggagacgagctcgtggtttcaaagaggaaggacgatgaagggagaggaccaa
gagttcaagggaattaagaaggatgatgaggggcaagggggagaagagggggaaggtggt
gaaatggagcttatgaacgagtag
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