Cryptococcus deneoformans JEC21: CNI00420
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Entry
CNI00420 CDS
T00243
Name
(RefSeq) DNA-directed RNA polymerase, putative
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CNI00420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNI00420
Enzymes [BR:
cne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CNI00420
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CNI00420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
3259518
NCBI-ProteinID:
XP_572718
UniProt:
Q5KC33
LinkDB
All DBs
Position
9:join(102716..103012,103061..103602,103825..106020,106070..106295,106349..106657,106712..106762)
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AA seq
1206 aa
AA seq
DB search
MPPKAPVKRTAASSSTTAPRKAPRAGPSTTTATAKRPATTSSTVAKGKAPARPSASTQVD
VKPKIEDTRGEEEWADLMKQQYGDKKGADWYSKGVKTVEDKWQLLPAFLKVKGLVKQHLD
SFNYFVNVDIKAILAANSLVISDINPKYYIRYTDIRVGRPARHDANQVASALSPMECRLT
DSTYSAPIYVDVEYMGEEKRSKQRGVQIGMLPVMLRSDLCNLKGKNEAELARMGECPMDP
GGYFVVKGTEKVILVQEQLSKNRILVMKDKKDEVMAEVTSSTHDRVVKTYVVSKANRLYL
RHNSFKEFIPIVIALKAMGLTADKEILQLICGSDERYQEAFGVSLEEAAKEKTFTRRQAL
EWIGARVSPNQAKDDSGSNQKLTPSDIAQQALAAMVLGHVPVRNMNFRPKCIYLATMARR
VLMAMIDDHMVDDRDYVGNKRLELAGQLLSLLFEDSFKTFNSELKKRMDKILEKPNRAGP
FDAGTLIRQGGDPITQAFVRSISTGNWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISS
QFEKTRKVSGPRALQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDVPETPLVKMAFM
LGVEDISLVTGNELYRPGVHMVQVNGTLIGVTNMAKRFVRQFRKLRRAGRMSEFVSIFIN
HHHKIIYIASDGGRICRPMIIVEKGRSRVTTEHVRLLKEGKVTFDHFLRAGLVEYLDVNE
ENDSFIACYENEIEEGTTHLEIEPFTILGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAI
AYNQLNRIDTLLYLMTYPQQPMVKTKTIELIGYNKLPAGQNATVAVMSYSGYDIEDALIL
NRASVDRGFGRCHVLKKVTTPMRTFHNGSHERTAYPDPPPRPDAYTFVDKADGMTAPGAT
INQYDVMIHRETPVDTRGGGADTQLYKPMPVTHKTPEPILVDKVMLTEGEDGALIKILTR
QTRRPELGDKFSSRHGQKGVCGLIVPQADMPFNDQGIVPDIIMNPHGFPSRMTVGKMIEL
LSGKAGVVAGKLQYGTAFGGSKVVDMSQILIDNGFSYGGKDMLTSGITGQPMEAYVYFGP
IYYQKLKHMVMDKMHARPTGPRANLTRQPTEGRSKDGGLRLGEMERDCLIGYGATQLLLE
RLMISSDAFETQVCESCGMLGYNNWCPKCKSGKGVVGLTIPYAAKLLIQELMGMNIMPKL
CLEDTV
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctaaagcccctgtcaagcgcacggcggcttcatcctccactactgctcctcga
aaagctcctcgcgctggcccatctacgacaacagcaaccgcaaagcggcccgccacaact
tcctcaacagtagctaagggcaaagcgccagctcgaccgtcggcatctacacaggtcgat
gttaagcccaaaattgaagatactaggggagaggaggaatgggcagatttaatgaagcag
cagtatggcgataagaagggcgctgattggtattccaagggtgtgaagactgtcgaagat
aaatggcaacttctcccagcttttctcaaagtaaaaggccttgtcaagcagcatcttgac
tcctttaactattttgtcaatgtcgacatcaaagctattcttgcggccaactctcttgtc
atttcagatatcaaccccaagtactacatccgatataccgacatccgtgtagggcgtcca
gcacgacatgatgctaatcaagtggcctctgctctttcgccgatggagtgtcgattgaca
gattccacatatagcgcgccgatctatgtggatgtggaatacatgggagaagaaaagagg
agcaagcagaggggtgtgcagattggcatgttgccagtaatgttgaggagcgatttgtgt
aacctcaaagggaagaatgaggcggagctagcgaggatgggagagtgcccgatggatccg
ggaggatatttcgttgttaagggaacggaaaaggtcatattggtgcaagagcagttgagc
aagaatcgtatcttggtaatgaaggataagaaggatgaggtgatggctgaagttacatct
tcaacgcacgaccgagttgtcaaaacctatgtcgtcagtaaagccaaccgtctctatctc
cggcacaactctttcaaggaattcatccctatcgttatcgccctcaaggctatgggtctc
actgcagacaaggaaatcctccaactcatatgcggttccgacgaacgataccaggaggcc
tttggtgtttccctcgaagaagctgccaaggagaagacctttacgcgccgtcaagcgctc
gaatggattggcgccagagtatctcccaaccaggctaaggatgacagcgggtccaaccag
aagcttaccccaagcgatattgcccagcaggctcttgctgcaatggttcttggtcatgtt
cctgtgcgaaacatgaacttccgacccaagtgcatctatcttgccaccatggcgcgaagg
gttctcatggccatgattgacgatcatatggttgatgatcgagattacgttggtaacaag
cgtctagaacttgccggtcagcttttgtctttgctctttgaagattctttcaagactttt
aacagcgagctcaaaaagcgaatggacaaaattctggaaaagcccaaccgtgccggtcct
ttcgatgccgggactctgattcgtcaaggtggtgatcccatcactcaggcgtttgtccgt
tccatctccaccggcaactggtcgcttaagcgattccacgtcgagcgggcaggtgttacc
catgtcttgtctcgtttatccttcattgccgcattgggtatgatgactcgtatctcttct
caattcgaaaagacgcgtaaggtctctggtcctcgtgctcttcaaccgagtcagtggggt
atgctctgtccttccgatacgcctgaaggtgaagcatgtggtcttgtgaagaacttggct
cttatgacccacattactacggacgtacctgaaacgcccttggtcaagatggcgttcatg
cttggtgttgaggatatttcccttgttaccggtaatgaactctaccggcccggagtgcat
atggtgcaggtgaatggtacgctcatcggtgtgaccaacatggcgaaacgatttgtgaga
cagtttagaaagttgaggcgagctggaaggatgtctgagtttgtgtcaatctttattaac
catcaccacaagatcatctacattgcaagtgatggtggacgaatttgtcgaccgatgatt
attgttgaaaagggaagatcacgagtgacaacggagcatgtgaggcttttgaaagagggc
aaagtcactttcgatcatttcctccgagcaggcttggtggaatacctagatgtcaacgag
gagaatgactctttcatcgcgtgttacgaaaatgagatcgaagaaggaacaacgcatctc
gaaatcgaaccatttactattctcggtgctgtcgccggtttgattccttaccctcaccat
aaccaatctcctcgaaacacctatcaatgtgcgatgggtaaacaagctattggcgccatc
gcatacaatcagcttaaccgaattgataccttgctgtatctcatgacataccctcaacag
cccatggtcaagaccaaaacgatcgagctgatcggctacaacaaacttcccgccgggcag
aatgctacagtcgctgtcatgtcttactctggatacgatatcgaagatgctttgattctc
aatcgtgccagtgtagaccgaggttttggtcgatgtcatgttctcaagaaggtgacaacg
ccaatgcgaacgttccataacggttcacatgaacgtactgcttatcctgatcctcctcct
cgacccgacgcatatacttttgttgataaggccgatggcatgaccgctcccggtgctact
atcaaccaatacgacgtgatgatccatcgagaaacccctgtcgatactcgtggtggtggt
gcggacacccagctgtacaaaccaatgcctgtcacccacaagacacctgaaccgattttg
gttgataaggtgatgctaacagagggcgaggatggtgcgttgatcaaaatcttgacgagg
cagactcgaaggccagaactgggtgacaagttctcttcgcgacacggtcagaagggtgtt
tgtggtttgatcgtgccccaggcagatatgccattcaatgatcaaggtattgtacctgat
atcatcatgaatcctcatggtttcccctctcgaatgactgtcggaaaaatgatcgagctc
ctttctggtaaagccggtgtcgtcgctggtaaactccaatatggcactgcatttggtggt
tccaaggtcgtcgacatgtcgcagatccttatcgacaacggtttttcgtatgggggtaag
gatatgttaaccagtggtatcaccggtcagccgatggaagcctacgtctactttggacct
atttattatcagaaacttaagcatatggtcatggacaaaatgcatgctcgacctactggt
ccacgagctaatcttactcgccagcctactgaaggtcgttcgaaggacggtggtctccgt
ctaggtgaaatggagcgtgattgtttaattggttatggtgccactcagcttttgttggaa
cgtcttatgatctcctccgatgcgttcgagactcaagtatgtgagagctgtggtatgttg
ggatacaataactggtgtcccaaatgtaagagtggtaagggggttgtagggttgaccatt
ccgtatgcggccaagttgttgatacaggagctgatgggtatgaacattatgcccaagctt
tgcttggaagacactgtctag
DBGET
integrated database retrieval system
