KEGG   Cryptococcus deneoformans JEC21: CNI00970
Entry
CNI00970          CDS       T00243                                 
Name
(RefSeq) DNA helicase, putative
  KO
K15271  ATP-dependent DNA helicase HFM1/MER3 [EC:5.6.2.4]
Organism
cne  Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cne03036]
    CNI00970
Enzymes [BR:cne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CNI00970
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    CNI00970
SSDB
Motif
Pfam: DEAD Sec63 Helicase_C ResIII SNRNP200_wHTH AAA_16 AAA_22 DUF7733
Other DBs
NCBI-GeneID: 3259475
NCBI-ProteinID: XP_024513495
UniProt: Q5KBY3
LinkDB
Position
9:complement(join(235288..235355,235418..236197,236249..236368,236407..236523,236565..236636,236683..236880,236929..237027,237068..237342,237395..237518,237562..237603,237651..237779,237825..237958,238005..238072,238130..238166,238214..238287,238339..238349,238405..238507,238549..238660,238706..238772,238826..238845,238893..238936,238984..239067,239121..239231,239282..239429,239487..239574,239635..239800,239849..240106,240150..240233,240282..240361,240412..240628,240687..240754,240807..240929,240984..241295,241349..241460))
AA seq 1514 aa
MDFEEDQPLWDGSRQEEEDVYFGKFGYAEGYESPYHPNNSPTPRYDIGLSSRSLNPGQNL
TGFSASQFNPSRHTPFPLISDSHSLLTDLALNRSTRQFTPENSLARDHSAILQRQQSENY
GDEIWEDEEFVEAVNESFNHEIDNAKEYDPVITAETIRSREELRNKAVFNKNGKPLVPLS
RLPIDQRKLFKFPCFNNVQSEVFDDVYQSDENLVVSAPTGSGKTTIFELAFLHNLSFRTP
DDSLKPLAVYIAPTKALCNEKAKDWQERLSQALPDVICNEITGDYGNTSTIYNSIRTADL
MVTTPEKFDSMTRRSRNLENMSQRLRLIMIDEVHILRESRGATLEVVISRLKGLGRGIRF
VALSATVPNIDDIARWLGPTRNEYGQLSRGVLVGREVISAKEKRAPAVDDMPMAKVYKFG
EEYRPVPLQRETYGIESTGNDWALANRLDKELFPILLRHAAGQPVLVFCPTRKSCQATAE
SIFQSYEEARAKGLKLPWQHPPGVRLELQDKKLTELSTCGIAVHHAGLDYGDRRAIEDGF
RDGKLHMIASTSTLAVGVNLPAHTVVIKGVMAWQGASSGFQEYSDIDIQQMVGRAGRPQY
DTSGVVVVMCERSKVRKYQSMLNSQTVLESCLHENLTEYINSEIGQGTIRSVSSAQEWLR
NSFFHIRIQQNPKHYALSDAKDKPVEGAWEEWLDHYVEKALINLEKDGFIERADDDTLIP
TETGKIMSSSMISYGTMCSIKAMSPGSTVQDLLEILAGSTEFQDLRIRQGESGFLNKLRI
NEEIRFPLAEAVKSYADKVFLLLQVTFGNIILEDIAKKTELTSPIQTLMAIYNHAPRIVK
AIVQFTLNREYGIAARSALELHRVVVGKAWEDLPTIFRQIPSIGPKSIRVLGQNGITNFD
QLLDVESEKIQLWLNRGHDFARAIHEQARRMPRFHVTMEEENMDYDGTYNVLNLRVNITP
KAKVIATESRGKRGGFITQYNLSTLFLNQSGGFIGYRRLELKKLIKNKDNSFIIAVTLSK
RCDSVAAIVGVDEVAGCSTVIHYNTNLDDSVYPEDLEDDENVEEPPSQRTLVEPTPELEE
ELLPNGNVKCHHSCKDKLACQHVCCKSGVPPRKRNKAGARASGRSNVRTAADRIRETQYC
VESPREELRPVGKAVRRIRQGSQMSRSPSPASNVQAANHKAAIVSEMQPNTRAVERVREA
RIVRGPLSSTVAIEPRSRSTTPIVPPKAVKNENIASGQIKEPLFLPGSDDDYNARHHEND
PSRKAIARSKAMSGSTSRYFDQPKTSGKAKNALSRKPPTMPVTSSASHPSILDLLPGQAT
IKNNSDANSHDLGPIHGNFSDDGYETVRESPEMKHSRVFPHSKPSIDWYTEEIVQDDPEK
STEANKSHVVTNAQAPENWEFNIEEMFADISGSPSSPKQLEEEPKSVLNINPSPSLKQPA
RLIIGGFGRPSIKRQRLHEDQHSSNYSLAQPFAQSDNPDILRANENGPTAQGPSASMPQN
EMDEFEDWYMGEGG
NT seq 4545 nt   +upstreamnt  +downstreamnt
atggatttcgaagaagatcagccactgtgggatggatcgcgtcaagaggaagaagacgtc
tactttggaaaatttggttacgcagaggggtacgagtctccgtatcaccctaataattct
ccaacaccaagatacgacattggtctttcttccaggtcactcaatcctggacaaaatcta
accggcttttcagcatcccaattcaatccctcaaggcatactccattcccgctgatctca
gactctcattcgctcctcaccgatctggcccttaaccgaagtacaaggcaattcactccc
gaaaactcacttgcccgtgaccattcagctattttgcaacggcagcaaagcgaaaattat
ggagacgaaatttgggaagatgaggagtttgtggaagcagtcaatgagagctttaatcat
gagattgataatgcgaaggagtatgatcctgtaatcactgcagagaccatcagaagtcga
gaagaattgaggaacaaggcagtcttcaacaagaatggtaaacctctcgtaccattgtca
agacttcctatagaccagcgcaagttattcaaatttccctgtttcaataacgtccagagc
gaagtatttgacgatgtatatcaaagtgatgagaatctggttgtctcggcacccactggt
tccggaaaaacaacaatcttcgaactcgcgttcctccacaacttatcatttagaaccccc
gacgactcgctcaagcctttagcggtatatatcgcccccactaaggctctttgcaatgaa
aaggccaaggactggcaggagcggctaagtcaagctcttccggatgtgatatgtaacgaa
ataactggtgactatggcaatacatccacaatctataactctatcaggaccgcggatctg
atggtaactacaccagagaaattcgactctatgacgcgtcgatccagaaatttggagaat
atgtctcaacgtctgcgattaattatgattgatgaggtccacatcttgcgcgaaagccgg
ggtgccaccttggaagttgtcatatctcgtctgaaaggacttggtaggggcatacgcttt
gtagcgctcagcgcaacagtgccaaatatcgatgacatcgctcgttggctaggaccgacc
agaaatgaatatggccaactttcaagaggggttcttgtcggaagggaagtgatcagcgca
aaggaaaagagggcaccggcagtcgacgatatgcccatggccaaagtctataagttcgga
gaggaataccggcctgtacctcttcaacgtgaaacttacggcatcgagtccaccggaaat
gattgggcgctcgccaatagacttgataaagagctcttccctatacttttgaggcacgca
gctggccaacccgtcctggttttctgtcctacacgcaagtcatgtcaagcgacagcagag
tcaatatttcagtcctacgaagaagctcgggcaaagggcttaaagttgccgtggcaacac
ccaccaggcgtccgacttgaattgcaagataagaaattaactgaattgtccacctgtggc
attgctgtgcatcacgccggtttagactatggtgatcgaagagctattgaagatggtttc
cgcgacggtaagcttcatatgatcgcgtctacctctacgttggccgtgggtgtgaatcta
ccggcgcatactgtagtcatcaaaggcgtgatggcttggcagggtgcatcgtctggattc
caagaatactcagacattgacattcagcaaatggtgggaagggctggccgtccccagtat
gacacctcaggtgttgtggtggtcatgtgtgagcgctctaaagtgcggaagtatcaatcg
atgttaaattctcaaacagtcctcgaaagctgtctacatgaaaatcttaccgaatatatc
aacagcgaaattggccaaggaactattaggtctgtctcatcagcccaggaatggctcaga
aattcgttcttccatattcgcatccagcaaaatcctaaacattatgctctgtccgatgca
aaagataagcctgttgaaggtgcttgggaagaatggctcgaccattacgtcgagaaagcc
cttatcaatcttgaaaaggatggctttattgaacgagccgatgacgatacactcatccct
acagaaacgggcaagatcatgagcagcagtatgatttcatacggcaccatgtgctcgatc
aaggcaatgtctcctggatcgaccgtacaagacctgttagagattttggctggatccaca
gagttccaagacttgcgaatcaggcaaggagagagtggttttttaaacaagcttcggatc
aatgaagagatccgtttcccactcgcagaagctgtgaagagctatgccgataaagtcttt
cttttacttcaagtgactttcggaaatatcatccttgaggacattgccaagaagacagaa
ctcacctcaccaattcaaactcttatggccatctacaaccatgcccctcgcattgtcaaa
gctattgtacagttcactttgaatcgtgaatacggtatagctgcgcgctcggccttagaa
ctccatcgagtagttgtgggtaaagcttgggaagacttgcccaccattttccgtcagatc
cctagcattggcccaaagtccattcgagtcctaggacaaaacggcatcacaaattttgat
cagcttcttgacgtggaatcagagaagatacagttatggttgaatagagggcatgatttc
gctcgcgcaatccatgaacaagctcgaagaatgccacgattccatgtgactatggaggag
gaaaacatggattacgatggaacttataatgttctcaacctgcgcgtgaacataaccccc
aaggctaaggtcattgcgacagaatctagaggcaaacgtggcggctttataacgcagtat
aatctctcgactttgttcttaaaccagagtggaggattcatcggctaccggagattagag
ctgaagaaactaataaagaacaaggacaatagcttcatcatagcagttacgctgagcaag
cgctgtgatagtgttgctgcgatagtcggggtcgatgaggtcgctggttgctcgacagta
attcactacaatacaaacttggatgactcagtatatcccgaagatttggaggatgatgaa
aatgtagaggaaccaccttcacagagaacccttgttgagcctactccagagctggaagag
gaattgcttcccaacggcaatgttaaatgtcatcactcatgcaaggacaagctagcatgc
cagcacgtttgctgtaaaagtggggtacctccaaggaaacggaacaaggcaggtgcaaga
gcttcgggaagaagtaatgtcagaacggccgctgaccgtattcgggagacacaatactgc
gtggaatcacccagagaagaattaagaccagtagggaaagccgttcgaaggatacgacaa
ggttctcagatgagtcgatccccgtcccctgcttcaaatgtacaagctgccaatcataaa
gcagcgattgtttcagagatgcaaccgaacacaagagccgttgaacgtgtacgtgaagcg
cgtatcgtccgtggtccattatcttctacagttgcaattgagcccagatcgagaagcacc
acgccaatcgtaccgcctaaagcagtcaagaatgagaacattgcgagtggacagataaaa
gaaccattattcctgccaggatcagacgacgattacaacgcgaggcaccatgagaatgat
ccttcacggaaagctatcgctcgctccaaagcaatgagtggttcgacatcaaggtatttt
gatcaacccaagacatccggcaaggccaaaaatgcactttctcgcaagcctccaacaatg
ccagttacgtcttctgcctctcacccttccatcctggatttattgccaggacaagctaca
atcaagaataacagcgatgccaattctcacgatttaggacctatccacggcaacttctct
gatgatggctatgaaacagtgcgggagagccccgagatgaaacattcaagggttttcccg
cactctaaaccatctatcgactggtacacagaagagatcgtgcaggacgatcccgaaaaa
tccacggaggccaataaatcgcacgttgtaaccaacgcgcaggcacctgaaaattgggaa
ttcaatattgaagagatgtttgcagacatcagcggatccccatcttctccaaaacagcta
gaagaggagccaaagtcagttctcaatataaatcctagcccttcgctcaagcagccagca
cgactcatcattggcggtttcggacgtccatcgataaaacggcaaaggctccatgaggac
cagcattcaagcaattattcgcttgcccaacctttcgctcaatcagataatcccgatatc
ttacgtgcaaatgagaacgggcctacggcacaaggaccttcagcctcaatgccgcagaat
gagatggatgaatttgaagattggtacatgggggagggcggatag

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