KEGG   Cryptococcus neoformans var. neoformans JEC21: CNI01070
Entry
CNI01070          CDS       T00243                                 
Name
(RefSeq) transcription regulator, putative
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cne03021]
    CNI01070
   03036 Chromosome and associated proteins [BR:cne03036]
    CNI01070
Transcription machinery [BR:cne03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     CNI01070
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     CNI01070
    SLIK complex
     CNI01070
SSDB
Motif
Pfam: SNF2-rel_dom CHD1-like_C HTH_Hrp3 Helicase_C Chromo ResIII HDA2-3 DEAD Myb_DNA-binding Cdh1_DBD_1 CHDCT2 AAA_22
Other DBs
NCBI-GeneID: 3259786
NCBI-ProteinID: XP_024513521
UniProt: Q5KBX3
LinkDB
Position
9:join(264293..264397,264455..264824,264878..265147,265206..265297,265349..265664,265717..265746,265786..266036,266108..266425,266492..266600,266653..266691,266740..266931,266988..267078,267134..267503,267565..267647,267697..267770,267821..268854,268907..269033,269088..269383,269443..269600,269652..269724,269775..269921)
AA seq 1514 aa
MGTYPQQHLPSSMLASDTQTGVGISASSSVISSQSPSSKPSSTHRITLRMPQQPESTADL
DSESESLTPSPEEINIGQGIGEEVSDQERAGDDESEGEAEQDDFNYDEEEEEDYDEDELM
EEGDDDDDDDDPNFGERKKKAKKARVKMDSDRPVKQKKSAGAFPMRKQVDESSDEDYGTK
AHKKKYFSKTGVSRKATPGTPYSEDNAFRRGAAKRVVTYNEADVDYGLESEDEAGDTGYH
YTAGAPAEAEPADEIDQVMFHWRDENHKDDPKDIPQVNLRFHIKWKDYSHIHNTDETYAF
LKNYKGFKKVENYITKVWTIDQRYHHPEPDAAWKPTQEEMEQYEIDKERIKELQESYKIV
ERVLDEKEEKRKEGRATLFFVKWTNLQYSDCTWETYEDVMECQGAKEGIEEFHQRQARTT
IPARSISYGIDNRPTYQKIPENPPYLACGGALKPFQLTGLNWLAYVWSKGENGILADEMG
LGKTVQSVSFLSYLFHVQHQYGPFLVVVPLSTISAWQAQFKRWAPELNVICYMGSARSRD
VIRQFEFGPLKNLKFNVLLTTYEFILKDRQDLQQIKWQVLAVDEAHRLKNHESQLYEALK
SFWSASKLLITGTPLQNNVKELLALMHFLMPEKFQLANDFDLNDASEDQGAKIKDLHDKL
TTLMLRRLKKDVVKELPTKSERILRVEMSAMQTHYYKNILTKNFAVLSKGGTQQVSLMNV
AMELKKASNHPYLFEGAEDRSKPANEILRGLVMNSGKMVCLDMLLSRLKSDGHRVLIFSQ
MVRLLDIISDYMTARGYVHQRLDGTVPSDVRKKSIEHFNAPGSPDFAFLLSTRAGGLGIN
LETADTVIIFDSDYNPQNDLQAMARAHRIGQQRHVSIFRLVSKGTIEEDILERAMRKMLL
EYAIINKMDTTGAHINGSSTPKDKNVDLSKEELSAILKFGARNMFKTDDSTQNKKLDEMN
LDDILNNADAFDTESAAAPGTTSLGGEGFLSQFAAIQDVKADVDNLSWDEIIPEDERGKA
EEEENAAATAEIVAASSRKRAAAKAPGTYQDMDLDDHDGSSKPGSPNDKKPKAPGQLKKT
PAQRALELKDRDLRVLIRGIQKWGDIRSRYEPIVKEAKLENKNRVVIIQTCEDIITHGEQ
TIAAHKAHIRDLQERGEPISSSLRQKAILFTYKGVASINAETVVARYYELKALVEHFKRV
EDFPSYTIPHDSLKPTMNWTVEWTAREDSQLLVGIWKHGFGSWEAIAHDPELHLNDKIFL
EDPKAAKLDPNAPKPGVPGPVHLQRRGDYLCGIIREYEENRRILVEQQAMIASLPAKEGF
GFEHPPLPSIAGPSKKPSPSIASSSKDRDSGKGKRRKTPEYTDSEDESSYESMDEDAVKE
LLRPAKKHLKKLKSGTENLSREEKIVALKECLAGIGARIDEVVAEKAAEGQNATKWRKHC
WVFASFFWPRQGVNYSKLMEIHGKMVNESGPTTSKSKAKPKRKTEDDPSKPNKKPRLSDS
QKEIKVEGSSGEQL
NT seq 4545 nt   +upstreamnt  +downstreamnt
atgggcacatacccccaacaacatcttccttcctctatgctggcgtctgacactcagacg
ggtgtcggaatatccgcttcctcatcggtcatatcctctcagagcccctcttccaaaccc
tcctcaactcacagaatcacactgcgaatgcctcagcaaccagagtctactgctgacctt
gattctgagtctgaatcactgacgcctagtcccgaagaaatcaacatcgggcagggcatt
ggggaagaagtcagtgaccaagagcgagcaggagatgatgaaagtgaaggagaagccgag
caggatgactttaattatgacgaggaggaagaagaggattacgatgaggatgaattaatg
gaggaaggggatgatgatgacgacgatgatgatcctaacttcggtgagaggaagaagaag
gccaaaaaggcgagggtcaagatggacagcgaccggccggtaaagcaaaaaaagtctgcc
ggtgcttttcctatgcgcaagcaagtagacgaatcctccgatgaagattacgggacaaag
gcgcacaagaaaaagtatttttctaagactggagtctcacgcaaagccactccaggtact
ccatactctgaagacaatgcgttcaggcgcggagccgccaagagggtggtgacatacaac
gaggccgatgtggactatggacttgagagcgaggatgaagcgggagatactggttatcac
tataccgccggtgcccctgcggaagccgagccagctgacgagattgaccaagtcatgttt
cactggcgagatgaaaaccacaaggatgatcccaaggatattcctcaagtcaaccttcga
ttccatatcaaatggaaagactactcccacattcacaacaccgacgaaacatatgccttc
ctcaaaaactacaagggtttcaaaaaagtcgaaaactacattacgaaagtatggacaatt
gatcaacgttaccaccatcctgaacccgatgctgcttggaaacccactcaggaagagatg
gagcagtatgagatcgacaaggaaaggatcaaggagctgcaggagagctataagattgtg
gaacgagttttggatgaaaaggaagagaagcgaaaagaaggtcgagcaacgttgttcttt
gtcaaatggacgaaccttcaatatagcgactgcacctgggaaacctacgaggatgtaatg
gaatgccaaggtgccaaagaaggcatcgaggaattccatcagcgtcaagctcgaacaact
atccctgcccgatcgatcagctatggtatcgacaataggcctacctatcagaagattcct
gagaaccctccttaccttgcgtgcggcggtgctttgaaaccgttccagcttactgggttg
aactggctggcgtacgtatggagtaagggcgagaatggtattcttgccgatgaaatgggt
cttggtaaaaccgtccaatccgtctctttcctctcatatctcttccacgtccaacaccag
tatggccctttccttgttgttgtccctctatcgaccatctccgcttggcaagcccagttc
aaaaggtgggcgcccgaattgaacgtcatttgttatatgggttcggccagatctcgagac
gtcattcgacagtttgaatttggaccactgaagaatttgaagttcaacgtccttcttacg
acgtatgagttcattctcaaggatagacaggatttgcagcagatcaagtggcaagtcttg
gctgtggatgaggcgcatcggcttaagaatcacgagtctcagctttacgaggcgctcaag
agtttctggagtgcctccaagttgttgatcaccgggaccccgcttcaaaacaacgtcaag
gaactcctcgcgctgatgcacttcttaatgcctgagaaattccaactcgccaacgacttt
gacctcaacgatgcgagtgaagaccagggagccaagattaaggatctccacgacaagctt
accacgctcatgttacggaggttgaagaaggatgtcgtcaaagagttgcctacgaaatcc
gagaggattctccgagtggaaatgtctgccatgcagacgcattactacaagaatatcctg
acgaagaactttgcggtcttgagtaaaggtggcactcaacaagtcagcttgatgaatgtt
gcgatggagttgaaaaaggcctcgaaccacccctacctctttgaaggagcagaggaccgc
agcaaacctgccaacgaaattcttcgtggtctcgtcatgaattctggcaagatggtctgc
cttgacatgcttctctcacgactgaaatccgatggtcaccgtgtccttatcttctctcaa
atggttcgtctgctcgatatcatctcggattacatgacagccagaggttatgtgcatcag
cgtttggacggaacggtgccctctgatgtgaggaagaagtcgatcgagcactttaacgcg
cctggctctcccgattttgcctttttgttatccaccagggccggtggtcttggtatcaac
ttggagacggctgatacggtcatcatctttgactcggactacaatccgcagaatgacttg
caagccatggcccgagcacatcgtattggtcagcaacgccatgtcagcattttcagattg
gtatcaaaaggaactattgaagaagatattcttgaacgggccatgaggaaaatgctcttg
gagtatgccattatcaacaaaatggacaccactggtgcccatatcaacggtagttccact
cccaaagacaagaatgtcgatctttcgaaagaagaactctcggccatcctcaagtttggt
gctcgtaacatgttcaagaccgatgatagcacgcagaacaagaagctcgacgaaatgaac
ctcgacgatatcctcaacaatgccgatgcctttgataccgaatcagccgctgctcccggt
acaacatctctgggcggtgagggcttcttgtcgcagtttgctgctatccaagatgtgaag
gcggatgtggacaacttgtcttgggacgaaatcattcccgaggatgaacgaggcaaggct
gaggaggaagaaaatgcggctgcgacagcagagatagtcgctgcaagttcaagaaagcga
gcagcggccaaggcaccggggacgtatcaggatatggatctcgatgaccacgacggaagc
agcaaacccggttcacccaacgacaagaaacctaaggctccggggcagctcaagaagacc
ccagcacaacgtgcactggagttgaaggaccgtgatttgcgagtgctaatccgaggtatc
caaaaatggggtgatatccgttcgcgatacgagcctattgtcaaggaagcgaagttggag
aacaagaatcgggttgtcatcatccagacctgcgaagatatcatcacgcacggcgagcaa
actatcgcggctcataaagcgcatattcgagaccttcaagaacgtggtgaacctataagt
tcttcccttcgtcaaaaggctatcttgttcacgtacaaaggtgttgcctctatcaacgcg
gaaactgtggtagcgagatattacgagttgaaggcgctcgtagagcatttcaagagagtg
gaagatttcccgtcttacacaatccctcatgacagcttgaagcccacaatgaactggaca
gtggagtggacggcaagagaagattctcagctgctggttggcatctggaaacatggtttt
gggagctgggaagcaattgctcatgacccggagcttcatctcaatgacaagatcttccta
gaagaccccaaggccgccaagcttgaccctaacgctcctaagcctggtgttcctggccct
gtccatcttcaacgacgtggtgactacctttgtggtatcatccgggagtacgaagagaac
cgtcgcattctggtagaacaacaagctatgattgccagtttgccggctaaagaaggattc
ggctttgaacatccacctttgccgtcaatcgctggaccttcgaaaaagcctagtccttca
atcgcgagttctagtaaagatagggattcaggcaagggtaaaagacggaaaactccggaa
tacacggactcggaggatgagtctagttatgagtcgatggacgaagatgctgtcaaggag
ttattgagaccagcaaagaaacatcttaaaaagctcaaatctggtactgagaatctcagt
cgagaggagaagattgttgctctcaaagaatgcctggcaggtattggtgcacgtatcgat
gaagtggtggcagaaaaggctgcggaagggcaaaatgctacgaagtggagaaagcattgc
tgggtgtttgcttcatttttctggccaagacaaggtgtcaactactcgaagcttatggaa
atccacgggaagatggtgaatgagtccggcccaacgacgagtaaatcaaaggctaagccg
aaacggaagactgaagatgacccaagtaagccgaataagaagcctaggctgtcggatagc
caaaaggaaattaaggttgagggctcgtctggggagcaactgtaa

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