KEGG   Cryptococcus deneoformans JEC21: CNI01130
Entry
CNI01130          CDS       T00243                                 
Name
(RefSeq) small nuclear ribonucleoprotein, putative
  KO
K12828  splicing factor 3B subunit 1
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNI01130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cne03041]
    CNI01130
   03036 Chromosome and associated proteins [BR:cne03036]
    CNI01130
Spliceosome [BR:cne03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    CNI01130
 Complex B
    CNI01130
 Complex C
   U2 SnRNP specific factors
    CNI01130
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    CNI01130
SSDB
Motif
Pfam: PPP2R1A-like_HEAT TOR1L1_N SF3b1 HEAT_EZ HEAT_2 HEAT_EF3_N Vac14_Fab1_bd HEAT HEAT_ECM29 Adaptin_N Htt_N-HEAT_1 XMAP215_CLASP_TOG RRP12_HEAT MMS19_C
Other DBs
NCBI-GeneID: 3259645
NCBI-ProteinID: XP_572829
UniProt: Q5KBW5
LinkDB
Position
9:join(278560..281072,281123..281196,281251..281550,281600..282058,282113..282231)
AA seq 1154 aa
MSDEEYPQLQSYTAPQDILDEHAELADEDETPDAFQDKAKSKQVAARQSDYHLRRFNRTD
GQGEGEDESYEERMRRINLEKEEEKVRRYKEKMEKEEKERGEMRVDDKTPPRELTGGDTP
PRKALIGDETPPRAQAGDVTPPRKKRRWDTEPEVKQEVKEEVKEEVKEEEPKKRRSRWDQ
TPAEAPPEKKRSRWDQTPAQTASSSVLAAPTNLAKPSGIVLVEDKRYRRMTDEELDSLLP
GSEEGYVVVPVPDDYHPAPSVRKMVPQQAEAGFMMQDETDAARARAAAGGLQGTTEQTEI
DGIGTLQFLKPEDTQYFAKVLGEGGGEENDAEYTVEELKERKIMRLLLKIKNGTPPVRKT
ALRQITDRAREFGAGPLFDKILPLLMERTLEDQERHLLVKVIDRVLYKLDDLVRPYVHKI
LVVIEPLLIDEDYYARVEGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSV
VASALGIPALLPFLRAVCRSKKSWQARHTGIRIIQQIAIMSGCAVLPHLRNLVDAIADGL
KDEQQKVRTMTALALAGLAEAAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYII
PLMDPEYAGYYVRECMPILIREFQTSDEEMRRIVLQVIKQCASTEGVTPSYIKEEVLPEF
FKAFWVRRMALDKRNYKQLVETTVELANKAGVAEIVGRTVNDLKDESEPFRKMVMETITK
VVSNIGAADVDERLEVLLIDGIIYSFQEQTFEDTVMLDGFATVVASLGPRVKPYLPQIVS
MILWRLTNKSAKVRMLAADLTTKLAPIIKSCKEDVLLSKLGVVIFEQLGEEYPDALGSLI
AAEGAIANVVGMTEMNPPVKDLLPRMTPILRNRHEKVQEATINLIGRIADRGAEYVPAKE
WMRICFELLDLLKAHKRAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQERQSRVCSTV
AIAIVAETCGPFTCIPAILNEYRTPELNVRNGCLKALAFVFEYVGEMSKDYIHSVVGLLE
DALTDRDHVHRQTACAIVKHLAIGVAGLGYEEALTHLLNLVWPNIFETSPHVIGGVMDAI
EAMRLGIGSGVVLSYVLQGLFHPARRVREVYWRMYNTLILGSSDAMVPFYPALGSESDLA
SGQDYTRHQLMMWI
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgtctgacgaagagtacccacagctccagtcgtacacggctccccaggacattctcgat
gagcacgccgagctcgcagacgaggacgagaccccggatgccttccaggataaggccaag
tcaaagcaagtagctgctaggcaaagcgactaccacttgcgtaggttcaacaggacagat
ggccagggtgaaggcgaggatgaaagctatgaagaacgtatgaggagaatcaatttggag
aaggaggaggagaaggttcgaagatacaaggaaaagatggagaaggaggaaaaggagaga
ggagaaatgcgagtggacgacaagaccccgccgagagagctcacaggtggtgatacccca
ccgcgtaaggctcttattggggacgagacgccccctagagctcaggctggtgatgttact
cctccccgcaagaagcgaagatgggatactgagcccgaagttaagcaagaagtcaaggaa
gaggtcaaggaggaggtcaaggaagaagagcccaaaaaacgtcgctctcgatgggatcag
actccagctgaggcaccacccgagaaaaagcgttcccgatgggatcaaactcctgcgcag
actgcgtcctctagtgttctcgctgctcctaccaacctcgccaaaccttccggcatcgtc
ctggtcgaagacaagcgataccggcgcatgactgacgaagagctcgactcattgcttcct
ggatctgaagaaggttacgttgtggtacccgtaccagacgactatcaccccgccccttca
gttcgcaagatggttccccagcaggctgaagctggatttatgatgcaggatgaaacagat
gctgcacgagcgcgagcagctgctggtggtttacagggtacaactgagcaaacagagatt
gatggaattgggactctccaattcctcaagcctgaagatacccagtactttgccaaggtt
ctcggcgaaggcggtggtgaagaaaacgacgcagaatacactgttgaagagctcaaagaa
cgcaaaatcatgcgacttttgctcaaaatcaagaacggtacccctcccgtccgtaaaacc
gctttgcgtcaaatcaccgatcgtgcgcgagagttcggtgcgggtccattattcgacaaa
atccttcctcttcttatggagcgtacgctcgaagaccaagaacgacatttgcttgtcaag
gtcatcgaccgtgttctctataagcttgatgaccttgttcgtccatatgtccacaagatc
cttgtcgtcatcgagcctcttcttatcgatgaggattactacgctcgagtcgaaggtcgg
gaaatcatttccaacctcgccaaagcagccggtcttgcccacatgatctccaccatgcgt
cccgatatcgaccacgttgatgagtacgtccgtaacaccactgccagagccttttcggtt
gtagcctccgcccttggcatccctgctcttcttcctttccttcgtgctgtctgtcgatca
aaaaagtcttggcaggcgagacataccggtatccgtattatccaacaaattgccattatg
tcaggctgcgcagtccttccccatcttcgtaacctcgtcgacgccattgccgatggtttg
aaagatgagcaacaaaaggttcgaactatgaccgctctcgcccttgctggtcttgccgaa
gctgccgcgccttacggtatcgagtcattcgacaacgttctcaaacctttgtggctcggt
atcagacagcaccgaggtaagactctcgccgccttcctcaaagccatcggttacattatc
cctcttatggaccccgagtacgccggatactatgtgcgagagtgtatgcctattttgatc
cgagaattccagacttctgatgaagaaatgagaaggattgtcttgcaagtcatcaagcag
tgtgcctccaccgagggtgttactccttcatacatcaaagaagaggttctccccgagttc
ttcaaggctttctgggtcaggcgtatggcgttagacaaaaggaattacaagcagcttgta
gagaccactgtcgagctggccaacaaggctggtgtcgcagagatcgtcggtaggacagtc
aatgatttgaaggacgaaagtgaacctttccgaaagatggttatggagaccatcaccaag
gtggtttccaacattggtgctgccgatgtcgacgaacgtctagaagtcttgttaattgac
ggtattatctattccttccaggagcagacttttgaagacactgtcatgcttgacggtttc
gccactgttgtcgcctctctcgggcctcgtgtcaagccttaccttccacaaatcgtttcc
atgatcctttggagattgaccaacaagtcggccaaggtgcgaatgttggcagctgacttg
accaccaagttggcaccgattatcaagagctgtaaggaggatgtactgttgagcaagttg
ggtgttgttatcttcgagcagttgggtgaagagtatccggacgctttgggaagtcttatc
gccgcggagggggctatcgcgaacgttgttggtatgacagagatgaacccgcccgtcaag
gatcttctccccagaatgacccccattcttcgaaaccgacacgaaaaggttcaagaagcg
accatcaacttgattggtcgtattgccgatcgaggtgccgaatatgtccctgctaaggaa
tggatgcgaatctgtttcgagcttcttgacctgctcaaggcccataagcgagcgattcga
cgagcggctgtcaactctttcggttatatcgccaaggctattggtcctcaggatgtgttg
agtgtcctcttgacaaatttgaaggtgcaggagcgacagagtagggtgtgtagtaccgtc
gctatcgccattgtcgccgaaacctgtggtcctttcacttgtatccccgctatccttaat
gaatatcgaactcctgaacttaacgttcgaaacggttgtctcaaggctcttgctttcgta
ttcgaatacgtcggcgaaatgtccaaagattatatccattcagtcgttgggttgctcgaa
gatgctctcactgatcgagatcacgtccaccgacaaacggcttgtgccattgtcaagcac
ctggcgattggtgtcgccggcttgggttacgaagaggcgctcacacatttgttgaacctt
gtctggccaaacatttttgaaacaagtccacacgttattggtggtgtgatggatgctatc
gaagcgatgagacttggtattggatctggtgtcgtgttgagttatgtgttgcaagggttg
ttccaccctgccaggcgagtaagggaagtttactggaggatgtacaacactttgattctt
ggatcatcagacgcgatggtacccttctaccctgctttgggttcagagtccgatttggca
tctggacaggattacacaaggcatcagctcatgatgtggatctag

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