KEGG   Cryptococcus deneoformans JEC21: CNI01460
Entry
CNI01460          CDS       T00243                                 
Name
(RefSeq) splicing factor, putative
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    CNI01460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cne03041]
    CNI01460
Spliceosome [BR:cne03041]
 Complex A
  U2 snRNP components
   U2 related factors
    CNI01460
 Complex B
    CNI01460
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 RRM_1 zf-CCCH_2
Other DBs
NCBI-GeneID: 3259494
NCBI-ProteinID: XP_572679
UniProt: Q5KBT6
LinkDB
Position
9:complement(join(428109..428298,428367..428603,428663..428803,428901..428978,429030..429055))
AA seq 223 aa
MASHLANIFGTEQDRVNCSFYLKIGACRHGDRCSRKHIKPQFSQTILLPNVYNNPGHTPE
GQNMSAEELQADFDRFYEDFFIELAKYGNLQEMIVCDNVGDHLLGNVYARFEYEAEAARA
VQALNDRWYAMRPLHAELSPVTDFRESCCRQNELGECKREGFCNFMHLCHPTRSLVSALQ
ASQRVSRRRAHKGAEVDSGDMGWTPAVAAGGEGDLGWMPERRY
NT seq 672 nt   +upstreamnt  +downstreamnt
atggcttcccacctcgcaaacatctttggcacagaacaagaccgtgtcaactgctccttc
tacttgaagattggtgcctgcagacacggtgacagatgttcaagaaaacacatcaagcct
caattctcacaaaccatcctccttcctaatgtctacaataaccctggccacacacccgaa
ggtcaaaatatgtctgcagaagagctccaagcggatttcgataggttttatgaagacttc
ttcatcgaactggccaaatatggaaacctccaagaaatgattgtttgcgacaatgtcggc
gaccaccttctcggaaatgtatatgcgcgattcgaatacgaagcagaagcagctagagca
gtccaggcgttgaacgacaggtggtatgctatgagaccgttgcatgccgagctgtcgccc
gtgacagatttcagggagagttgctgtcggcagaacgagttgggagagtgcaaacgtgaa
ggcttttgcaactttatgcacctttgccaccctacaagatccctcgtttcagcccttcaa
gcatcacagcgtgtctcaaggcgacgggcacacaagggtgccgaggttgatagcggagat
atgggatggacaccggcagtcgcagcaggcggagaaggtgacttgggatggatgcctgaa
aggcggtattag

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