KEGG   Cryptococcus deneoformans JEC21: CNI01550
Entry
CNI01550          CDS       T00243                                 
Name
(RefSeq) RNA helicase, putative
  KO
K18664  antiviral helicase SLH1 [EC:5.6.2.6]
Organism
cne  Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cne03019]
    CNI01550
Enzymes [BR:cne01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CNI01550
Messenger RNA biogenesis [BR:cne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     CNI01550
SSDB
Motif
Pfam: Sec63 DEAD WHD_SNRNP200 ResIII Helicase_C AAA_22 DEXQc_Suv3 His_biosynth
Other DBs
NCBI-GeneID: 3259712
NCBI-ProteinID: XP_024513516
UniProt: Q5KBS7
LinkDB
Position
9:join(444848..444945,445002..445187,445244..445427,445481..445687,445752..445871,445924..446031,446079..446157,446208..446221,446277..446693,446748..446830,446883..447021,447071..447361,447417..447653,447708..447724,447776..447879,447931..447960,448018..448212,448268..448332,448387..448470,448531..448641,448690..449531,449584..451240)
AA seq 1755 aa
MSVQHYLGTLFQPQPPTFEDSWKAVISSWGPSQFRAQAIDDFEPVLETSPWPSVLNYLTE
TGLPSVTLEPPPIESTPAPESSSSTKADLVDRLRQHIPATFGSLVNLLSTPRSNDDIQSE
LIEVMGFEGDALSLVEELLKPGARQDVIDSCLRSTPNAQDKKETRPVQMDKPAYLPNARM
TVKGKVKDRKKIIDISDIVGSAEDINKRLQEQIEGPKAMFSEDGPKMVEQEILPHVYTAT
GNKFVPLSHGGKFALPEGTKREYTDTYEEVIIPPANPIPPKKTERPVKIAELSPIARGCF
PKYIQLNRMQSIVQPTAMNTNENMLICAPTGAGKTDVAIMSIIRVLSQHVIDGPTSHPSG
FNINRNAFKVIYVAPMKALAAEIVSKFAKRLAWLSIKVRELTGDMQLTKQEIEETQIIVT
TPEKWDVVTRKPTGEGELASKVKLLIIDEVHLLAEDRGAVIETIVARTLRQVESSQSLIR
IVGLSATLPNYVDVGDFLRVNRYQGLFYFDASFRPVPLEQHFIGVSGKPRSAVSARNMDR
VVFEKVSELVEAGHQVMVFVHARRDTVKTAQTLKEMALEEGVSTFFQTDGHAKFSQYRAE
LSKSKNKEMKELFDAGFGIHHAGMLRTDRNMMEKMFEDGCINVLCCTSTLAWGVNLPAHA
VIIKGTQVYDTGKGSFMDLSVLDVLQIFGRAGRPGYATSGVGFICTTHDKVDHYVTSVMS
QTPIESKFIPGMTDALNAEVALGTITNVQEAMQWLSYTYLFVRMKKNPWVYAMAHDVTKD
DPQLGNKRNELIVQAARLLQKARMVRYDDLANTFGITDLGRIAAKYYLRFSTIETFNSKF
NPRMSNADLFQMLCEATEFEQIQLRDSEVEELEAIIGSGVIPLEVAGGAINKRNKVNILL
QAHISNVYINDFALVSDAAFVAQNAGRIIRALLEIALSRNWANCSYLLVELSKCIERRQW
VYDHGLAQLKVLQRETIHKLTQYTPDSMTISDFRDMTAQENGEFIHMNEKHGQAVLDAAM
MFPTVNLTHTLRPITHDLLQITVKVTPQFKWHNKISGSSEPFYVWVQDEEGLNIYQWRSV
RVTPSTTVIDIDFFLPFDDVPPDSISIISISDKWLWSYEQLVIQLGDLIMPPPPKESTQI
LGIPFLRRSCFNDPQLEQRYAQTLDTLNTIQSHAFWMLYNTSMNAVVSSPVGSGKTLLAE
GAIWNAFRHNKESVVLIMVPERYAVHETVARLRNLCPPKRRVIIRPLFNVSDFDQLLSGG
PAIGVTTPFAVLSNEKIDNFLSTQRLGLYVFEDLHLLDEVYELAVSKILTFARTARTRIV
GTTSSLSDPSDLAEWLGVDPGPLDQWGKPVASQPPALFSFAPSDRGNHISVSIKSFTIPH
GPTLLRSMIKPTYDILKSVTGGAIIFVPSVQACATVAADLVTQSGTEMNVDGFLSRPRDE
VEPFAERLKDEKLFEPVLHGIGYITRDMAPTDIAIVLELFASGIIRAIIAPRQSCWTLPV
RGESVIIMGTQYVRMEARPEGKGPKAKPEKHLVSYSAKELVKMQGFAVVSAAPTAPGGRM
FIMCQAEQQVMISRVLKEGLPLESKILDLLSRRSTPSSSIDPRAIQALNNFFKGRRPPPR
PTVDRPRRPDGRKADMMDIVNWSFLSVRVKSNPSYYQLVKGSEAEGISRVIDGWFDAMDG
IKVETVEEQRRLTVEDAEAQEDRKDDVEKADLNSDQEGGVANVEENGNLDESEQKGTASE
KSGQSVGLCNTLEVN
NT seq 5268 nt   +upstreamnt  +downstreamnt
atgtctgtccaacattacctgggcactcttttccagccccaacctccaacatttgaggat
agttggaaagctgttatttcaagctggggcccttctcagtttcgtgctcaagccatcgat
gactttgaaccagtcttggagacctcaccatggccttcagttctaaactatttaaccgaa
acaggcctgccatctgtgactctggagcctcctcctatcgaatccacgcctgcgcccgag
tcgtcatcgtcaacgaaagctgatttggtcgatcgtttgcgccagcacattcctgcgacc
tttggatcacttgtcaaccttctgtctaccccgcgctcaaacgatgatatacaatcagaa
ctgattgaggtcatgggcttcgaaggcgatgccttgtcgctggtcgaggaattgttaaag
ccaggagcgagacaagatgtgattgacagttgtttgcgctctacccctaacgcgcaggac
aagaaggaaacgagacctgtccagatggacaagcccgcatatctaccaaatgccaggatg
acagtaaaggggaaggtcaaggatagaaagaaaatcatagacatctcagacattgttgga
tccgccgaagatatcaataaaagattgcaagagcagattgaaggtcccaaagcgatgttc
tcggaggatggtcccaaaatggtcgagcaagagattttgcctcatgtttacacagcaacg
ggaaacaaattcgtccctctttcccatggcgggaagttcgcgcttcctgagggtacaaag
cgagaatacacagatacgtatgaagaggttattatacctccagccaatcctataccgcct
aagaaaacagagcgccctgtcaagattgctgaattgtcacccatagctagagggtgtttc
cctaaatacattcagttgaataggatgcaaagtatcgtacaacctactgctatgaacaca
aacgagaatatgttgatttgcgcgcccactggtgccggtaaaactgatgttgctatcatg
tcaatcatccgcgttctgtctcagcacgttatcgacggtcctacctcccatccttcaggc
ttcaacatcaatcgcaacgctttcaaggttatttatgttgcgcccatgaaggcccttgct
gcagaaattgtgtctaaatttgcaaaacgccttgcatggctcagtatcaaggtcagagag
ttgactggtgacatgcaattaacaaagcaagaaatcgaagaaacgcagatcattgtgaca
actcctgagaaatgggatgtcgtaactagaaagccgacaggtgaaggagaactggcttct
aaagtcaaattgcttatcatcgatgaggtccacttgcttgcggaagatcgaggtgctgtc
attgagactattgtggccagaacactcagacaagttgaatcaagccaatctctcattcgt
attgtcggtctcagtgccaccctgccgaattatgtcgatgttggagatttcttgagggta
aaccgatatcaaggtcttttttatttcgacgcttctttcagaccagttcctctcgagcaa
catttcattggtgtttctggaaagcctcgttcagccgtctcggcacgtaatatggatcga
gtcgtttttgaaaaggtctctgaacttgtggaggctggtcatcaagtgatggtgtttgta
catgcgcggcgagacactgtcaagactgcacagactctcaaggaaatggctttagaagaa
ggtgtctccactttcttccagaccgatggtcacgcaaaattcagtcagtacagggcagag
ctttccaagtctaaaaacaaggagatgaaggaactattcgacgccggattcggtatccat
catgccggtatgctgagaacagacaggaatatgatggaaaagatgtttgaggatggttgc
attaacgtcctgtgctgtacctcaactttagcatggggtgtcaatcttccggcacatgct
gttatcatcaaaggcacccaggtttatgacactggcaaaggctcattcatggatctctct
gtcctagacgtccttcaaatattcggtcgagctggtcgacctggatacgcaacaagtgga
gtcggcttcatatgtaccacccacgacaaggttgatcactatgtgacgtcggtcatgtct
cagacgcctatcgaatccaaattcatccccggcatgacagatgctcttaacgctgaggtg
gctttaggaacaattaccaatgttcaagaagcgatgcaatggttgagttacacctatctc
ttcgttcgcatgaagaagaacccttgggtttatgctatggctcatgatgttacaaaagac
gacccgcaacttggcaataagcgcaacgagcttatcgttcaagctgctcgccttcttcaa
aaagctaggatggttcgatatgatgatttggccaacacattcggtatcacggatctaggt
cgcattgcagccaagtactacctcaggttttccactattgagaccttcaacagtaaattc
aatccgcgaatgagcaatgcagatctgttccagatgctgtgtgaagcgactgaattcgag
caaattcagcttcgagacagcgaagttgaagaacttgaggccattattggcagcggtgtc
atcccattggaagttgccggaggtgcgatcaacaagcgcaacaaagtcaatatcctgctc
caagcgcatatttccaacgtctatatcaacgattttgctctcgtttctgacgctgcattc
gttgcacaaaatgctggacgtattattcgcgcgttgcttgagattgctcttagccgtaac
tgggccaattgctcctacctgctggtcgagctcagcaaatgtattgaacgccgacaatgg
gtttacgaccatggtctcgcccagctcaaggtgctgcagcgtgaaaccattcataaactt
actcagtatacgcccgacagcatgaccatctcggatttccgagacatgactgctcaagag
aatggcgagttcattcacatgaacgagaagcatgggcaggctgttttggatgccgcaatg
atgttcccaactgtcaaccttacccacaccttgcggccgatcactcatgatctactgcaa
atcaccgtaaaggtcacaccacaattcaaatggcataacaagatttcggggagcagcgaa
ccgttctatgtatgggtacaagacgaagaaggtttgaacatctatcaatggcgtagtgtc
cgcgtcacgccctcaactacggttatcgacatcgactttttcctaccctttgacgatgtg
cctccagactcgatatcgattatctccatatccgacaaatggctatggtcctacgagcaa
ctcgtcattcagctgggcgatctcataatgccgcctcctccaaaggaatccacgcaaatc
cttggcattccgttcctgcgccgctcctgcttcaatgatccccagctagagcagcgatat
gctcagacgttggacacgttgaatacaatccagagccatgccttctggatgctttataat
acttctatgaacgctgttgtctcttctcctgttggaagcggaaagactttactggctgag
ggagctatatggaatgctttccgacacaacaaagagtcggttgtcttgataatggtgcct
gagcgctacgctgtacatgagaccgttgcgagattacgaaatttatgtcctccaaagcga
agggtaatcatcagacctctcttcaacgtgtccgactttgaccaacttctctctggaggg
cctgctattggagttacgacaccttttgcagtcctgagcaatgaaaaaattgataacttc
ctgagtactcaacgcttggggctgtatgtctttgaagatttacaccttctcgatgaagtg
tacgaacttgccgtatcaaagattttgacttttgcccgcactgcacgaacccgaatcgtc
ggtacgacgtcatctctcagcgatccttctgatcttgctgaatggcttggggttgaccct
gggccgttggatcaatggggaaaacctgtcgcttcacaacctcccgctttgttcagtttc
gctccctcagatcgtggcaatcatatttctgtgtccatcaaatcgttcacaattccccac
ggtcctaccttacttcgctctatgatcaaacccacttacgatattctcaaatccgtgaca
ggcggtgctatcatttttgtgccatccgttcaagcttgtgccaccgtcgccgccgatctt
gtcactcaatccggaaccgagatgaacgtcgatggcttcctttctcggcctcgcgacgag
gtcgagccgttcgctgaacgcttgaaagatgagaaattgtttgaaccggtgcttcatggt
atcggttacattactcgtgatatggcaccgacggatatcgccattgttcttgagcttttt
gcgagtggtattatccgtgctatcatcgcccctcgtcaatcatgttggacacttccagtg
cgaggtgaaagcgtcatcattatgggcacgcagtacgtgcgcatggaagcgagacccgaa
ggcaaggggcccaaagcaaagcctgaaaagcacctggtaagctattcagcgaaagaattg
gtgaagatgcaaggcttcgctgtggtttcggcggcccccactgccccgggtggaaggatg
tttatcatgtgccaggcagagcagcaagtcatgatctctcgagtactcaaagagggtctc
ccattggaatctaaaatcctcgatcttctttcacgtagatctacaccatcctcttcgatc
gacccaagagctattcaagctctcaacaattttttcaagggtcgcagacctcctcctcgt
cctaccgtcgacagaccccgccgacctgacggcaggaaggcggacatgatggacatcgta
aattggtcattcctttctgtcagagtgaagagcaatcctagctactaccagctcgttaag
gggtcagaagcggaaggtatctcaagagtaattgacggatggtttgatgctatggatgga
ataaaggtggagactgttgaggagcaaaggaggctgaccgttgaggatgcggaagcgcaa
gaagatagaaaggacgacgtggagaaggcagacttgaattctgaccaagagggtggagtt
gcaaacgttgaggagaacggcaacttagatgaatcagaacagaagggcacagcgagcgag
aagtcaggacagagtgtaggactttgtaacactttggaagtcaattga

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