Cryptococcus deneoformans JEC21: CNI02950
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Entry
CNI02950 CDS
T00243
Name
(RefSeq) transcription corepressor, putative
KO
K11293
protein HIRA/HIR1
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cne03036
]
CNI02950
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
CNI02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_Prp19
Hira
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Mcl1_mid
Beta-prop_SCAP
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
3259556
NCBI-ProteinID:
XP_572650
UniProt:
P0CS38
LinkDB
All DBs
Position
9:join(800183..800219,800271..800351,800412..800513,800570..800660,800731..800816,800876..800968,801024..801106,801164..801409,801460..801635,801690..802586,802638..802733,802788..803279,803330..803495)
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AA seq
881 aa
AA seq
DB search
MKVTKPNWVEHTVGEKKAKTAIYSISVHPDGTRLATGGLDHKVKIWSTLPILDVEAEKEE
ENPKLLCTMSSHTGSVLSVRWAHHGRFLATGSDDQVIMIWGLDPDGGGRLWGSDEINVEN
WKALTRLVGHVADVVDLAWSRDDTMLASVGLDSTVWIWDGLTFERLRKLDLHQGFVKGVC
WDPVGNYLATQSDDKTVKIWNTEDWSLAETISKPFETSPQSTFFRRLSWSPDGAFIAASN
AMNGPVFVAAVIDREGWASDISFVGHENTIQVAAFNPRLFFPEGEPKGRATASSMLALGA
NDFSISIWRNTLYKPLVVLKDIFGADLMDLCWSNDGYVLYGSSVDGSVCAIQFEPSEFTD
LADFSATELVLREYDYKPKRAHQPLAVHSSAASITNGFGPSTTTSTHVNVLQPKKGKAKR
RVDLSNGNINAGPSAGPSRQALRPPPPVDPFSGPIQGFASPSTAQASTARMFEDAHRAFG
PGSGSISGTSPRAGDKRKASGSYEDPTRGVRGRGMPVQQPIQQFEVQIIRAPMVAPSPSD
AGPSKAYLPYPQVQSILRAQAIGNESRSIYLEARNTSDPKGENVLCYFADGEQRWMDYLP
KAALAVTVTKNFCAAACEDGSLRVYSPAGRLILNMKLSGLVYDLQGEDKMLLIITMDCQV
RVINVRNGKAFSPPSSIHHLLFPGSSSFHSFDIISCTVRPNGVPVIITSEPQAFAYDASL
HEWSTIASPPIAGIQPLPSGPSGPLSVVDQIVAKSAPVTTTEKSNAPWIEESYVMSQFEM
KLRGTVLLDSKEEHKHWLLGYMKYLGDENFAERAGEVMKDLIGPVYHQSKPTGWEPKLLG
VDKREIAAEVLDVLSKTLQGKNVASVWYDVLDKMKADEGSW
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttaccaagcccaactgggtggaacataccgtgggggagaagaaagccaaaaca
gccatctacagcatttctgtacatccagatggtacccgattggcaacaggtggcctagac
cataaagttaagatatggtcgacgctgcctattctcgacgtggaagcagagaaggaagaa
gaaaaccctaagctgttatgcacgatgtcttcccataccggatctgtgctgtccgtgagg
tgggctcaccacggaagattcctagcgacaggatcagatgaccaggttattatgatatgg
ggtcttgatcctgatggaggtggtcgactttggggttctgacgaaattaatgtcgaaaat
tggaaggctttaacgcgattggttgggcatgtagcagatgttgtggatctagcttggtca
agggacgacaccatgttggcatccgtcggccttgacagtactgtctggatttgggatggc
ttgacatttgaacgactgaggaaacttgatttacatcagggatttgttaaaggagtttgt
tgggatcctgttgggaattaccttgctacccagtccgacgacaagacggtgaagatctgg
aacactgaggactggtcattagctgaaaccatttccaaaccgttcgagacatcaccgcaa
agcacattcttccgaagattgagctggtcgcctgacggtgctttcatcgcagcgtccaat
gctatgaatggaccagtgtttgttgctgcggtgattgatcgagagggttgggcgtcggat
atttcctttgttggacacgaaaatacaatccaagtggctgctttcaaccctcgcctcttc
tttcctgagggtgaacctaaaggaagagcgacggcttccagcatgcttgcgcttggtgca
aacgattttagcatttccatctggcgaaatacactttacaagcctttggtggtgttgaaa
gatattttcggagccgacttgatggacctctgctggtcaaacgacggatatgtcttgtac
ggttcctccgttgatggctcagtgtgtgctatccagtttgaaccctctgagttcaccgac
cttgccgacttttctgcgaccgaactcgtccttcgagaatacgattacaaacccaaacgg
gctcaccaacctcttgcggttcattcctccgctgcctctatcaccaacggctttggcccc
tccaccactacctccactcatgtcaacgtcttacaacctaaaaagggcaaagccaaacgc
cgtgtggatctctctaatggtaacattaacgctggccctagtgcaggtccaagccgccaa
gctcttcgacccccaccaccagttgatccattcagtggacctatacaaggttttgccagt
ccctcgacggcccaagcgtcaacagcgaggatgtttgaagatgcgcaccgagcttttgga
cctggtagtggaagtatatcaggcacctcacctagagctggggacaagagaaaggccagc
gggtcatatgaggatcctacgagaggtgtacgagggaggggcatgcccgtacagcaacca
attcagcagtttgaagtccaaattatccgagcacctatggtggcaccttctccctcggat
gctggtccatcaaaagcctatctcccgtaccctcaagtacaatcaattttgcgggcccaa
gctattgggaatgaaagtcgtagtatctatctcgaagcccgaaatacttcagatccgaaa
ggggaaaatgtgctttgctactttgcagacggtgaacagaggtggatggattatttgccg
aaagcggctttggcggttactgtcacgaagaatttttgtgcggcggcttgcgaggatggt
agtctgagggtgtattcccctgcaggacgattgatactaaacatgaaattatcgggcttg
gtgtatgacttacaaggggaagacaagatgctgttgattataacaatggattgtcaagtg
cgcgtcataaacgtccgcaacggcaaagcattttccccaccgtcgagcatccaccatctt
cttttcccgggatcatcttcattccattcttttgacatcatttcatgcactgtccgacct
aatggtgttcctgtgatcatcacttccgaacctcaagcctttgcttacgacgcatccttg
catgaatggagcaccattgcctccccccctattgctggcatccagcctttgccgagtggc
ccttcaggtcctctctctgttgttgatcagattgtcgccaagtcggcaccagtgacgacg
actgaaaagagtaatgcaccttggatagaagaatcatatgtcatgtcacagtttgaaatg
aaacttcgagggacggtgctgttggattcaaaggaggaacacaaacactggttactgggg
tatatgaaatatttgggagatgagaactttgcggaaagggctggagaggtgatgaaggac
ctcattggccctgtataccatcaatcgaaacccaccggatgggaacccaaactcttgggt
gttgataagcgtgaaatagcggcggaagtgttggatgtgctctcgaagacattgcagggc
aaaaatgtagcatcggtgtggtacgatgtgctagataagatgaaggcagacgagggatcc
tggtag
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