Cryptococcus neoformans var. neoformans JEC21: CNI03430
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Entry
CNI03430 CDS
T00243
Name
(RefSeq) transcription initiation protein spt4, putative
KO
K15171
transcription elongation factor SPT4
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CNI03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNI03430
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNI03430
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
CNI03430
RNA polymerase I system
CNI03430
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
CNI03430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Acc5b_avian_CoV
Motif
Other DBs
NCBI-GeneID:
3259485
NCBI-ProteinID:
XP_572890
UniProt:
P0CR68
LinkDB
All DBs
Position
9:complement(join(930999..931117,931203..931311,931385..931498))
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AA seq
113 aa
AA seq
DB search
MPPKSGRAELRACLVCSILQSTNDFLTQGCPNCEDILEMRGSAERVAECTSLLYDGMIAM
IEPSESWVARWQRIDKRMRGIYAVRVTGRAPQDVIDAIEARGGVYRPRDAVED
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgccccctaaatctggaagagcagaactacgtgcttgtctcgtctgttccatcttacaa
tccacaaacgactttttgacacaaggatgtcccaactgcgaagatatcctcgagatgaga
ggttcagctgaaagagtggcggaatgtacgagtttgttgtatgatggtatgattgcaatg
attgagccgtccgagagctgggttgcgagatggcaacgtatagataaaaggatgagaggt
atttacgctgtgcgagtgacaggccgggcaccacaagatgtgattgatgcgattgaagcc
aggggtggtgtgtatagacccagggatgcggttgaagattag
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