Cryptococcus deneoformans JEC21: CNI04070
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Entry
CNI04070 CDS
T00243
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase, putative
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cne03400
]
CNI04070
Enzymes [BR:
cne01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CNI04070
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CNI04070
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
PML_CC
Motif
Other DBs
NCBI-GeneID:
3259476
NCBI-ProteinID:
XP_024513544
UniProt:
Q5KB21
LinkDB
All DBs
Position
9:complement(join(1082274..1082340,1082390..1082467,1082522..1082573,1082633..1083747,1083797..1084135,1084191..1084524,1084571..1084644,1084701..1084732,1084786..1084809))
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AA seq
704 aa
AA seq
DB search
MRILTWNVNVLRTCLDYHPFSSMKKKNIEGLLDELDAQIFCFQEHKTVRTRLEKSMACPG
PYDGFWTFPRSKTGYSGVCTYVDSRYCVPLKAEEGITGLLLGDRLSTMKPPWTDAERIGS
YPDVNDMEWMDELDGTKFDVKKLDMEGRAVVCDFGLFVLFNLYCPNETNSARRPYKMNYL
HALQERVQLLQAAGREVMLVGDINIVRQPMDSGEGPVRSSAEQHYSHPARRILDDWCAPK
GPMIDVVRESWPQRDDMFTCWNQKLDARSANYGSRIDYVLCTPGLRPWIKGGDILPKVYG
SDHCPVYVDLHESIVTPEGETLHLRDMLNPKDRPTSTSPVYPNDVKREAPEPPRFATKFM
DEFSGRQTSLKSFFGGGSKRAQEKTNGASLSTSVSASASPAPTPTASELSSAVQASESGA
TKIVSLPQAPEECVSAPFSLARTAFSSLDNPSPVHSRELSSKTSDGAPVKATLSSKQDKS
SAKPIDMTLDDDEDDEPILVSSKSENKPPPKPTRSSLSGSKSASSQVKLSSFFSQPHTEG
KRKSPPPPSSAPSISKRPSLAPLPQSNNAPFAASPSATTAEDECQGMTEEENQLISQAIA
EADAERAEKNAKAAPQWSSLFAKKLPPLCTVHHKPCKDFVVMKPGPNKGKRFWLCSLPVG
AGYDMGRSKRPREDVNPKFRCNFFLWDSANSRKETPNEGKEKKL
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaggatactcacatggaacgttaacgtcctacggacatgtctagattaccacccgttc
agctcgatgaagaagaagaacatcgaaggcctgctcgatgaactggatgcccagatattt
tgctttcaagaacataaaacggtccgcacacgtctagagaagtcaatggcttgcccgggc
ccatacgacggcttctggacttttcctcgttccaaaactggttatagcggagtctgcacc
tatgtggattctcgctattgcgtgcctctcaaggcggaagaaggtattaccggacttctt
ttaggcgaccggctgagtacgatgaagccaccatggaccgatgcggaaagaataggcagt
tatcctgatgtgaatgatatggaatggatggatgagctggacgggacaaagtttgatgtc
aagaagctcgacatggagggacgggctgtggtatgcgatttcggactgttcgtcttattc
aacctttactgcccgaacgagacaaatagtgctaggcgaccatacaaaatgaactatcta
cacgctcttcaagaacgtgtacagctccttcaggctgctgggcgcgaagtcatgctcgtg
ggagatatcaacattgtacgccagccgatggattccggagaaggacctgtgaggtcttca
gcggagcaacattattcccaccctgcaagacggatacttgatgattggtgtgcgccgaaa
ggaccgatgatagatgtcgtcagagagagctggcctcaaagagatgatatgttcacctgt
tggaatcagaaactcgacgccaggtcggcaaactatggaagccgtattgactatgtacta
tgtacacctggtcttcgtccatggatcaagggcggcgatatacttcccaaggtgtacggg
tctgatcactgtcccgtgtatgtcgacttgcatgagtccatcgtcactccagaaggggag
actctccaccttcgcgatatgcttaatcccaaagatcgacccactagcacgtctcctgta
tacccaaatgatgtcaagagggaagcacctgagccgccaaggttcgcaaccaaatttatg
gacgagttctcagggagacagacaagtctaaagagtttttttggtggaggatcgaagcgg
gcacaggagaagacgaatggagccagtcttagtacaagtgtgagcgcgagtgctagtccg
gctccaacccctactgcatcagaattatcatcggcagtgcaagcatccgaatctggtgct
acaaaaattgtttcactcccgcaagcgccggaagaatgcgtttccgccccattcagcctt
gctcgaactgctttcagttcgttggacaatccctcccctgttcatagccgggaattatct
tccaaaacaagcgacggtgccccagtaaaggcaaccttatcgtccaaacaagataaatct
agcgcaaagcccatagacatgacattagatgacgatgaggatgatgagccaatcttggta
tcgtcaaaatcggaaaacaagcccccaccgaaacctacgaggtcatcgttgtctggttcg
aaatcagcctcctcacaagtcaagctctcttcatttttcagtcaaccgcataccgaaggc
aaaagaaaatccccaccaccaccatcctcagctccttctatctcaaaacggccctcattg
gcaccacttcctcagtcaaataatgctccgtttgctgcctctccttccgccacaactgcg
gaagatgagtgccagggcatgacagaagaagagaatcaacttatttcgcaagctattgca
gaagcagacgcagaaagagcagaaaaaaacgcaaaagctgctccgcaatggtccagcctt
tttgccaaaaagctgccaccgttgtgcacagttcatcataagccgtgcaaggattttgtt
gtaatgaagcctggacccaataaggggaaaaggttctggctatgctccctgccggttggc
gcagggtacgatatggggagatcgaagagaccgagagaagatgtaaatcctaaattccga
tgcaatttttttctctgggattctgccaattcgagaaaagaaaccccgaatgaggggaaa
gagaagaagctgtag
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