Cryptococcus neoformans var. neoformans JEC21: CNJ00220
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Entry
CNJ00220 CDS
T00243
Name
(RefSeq) RNA helicase, putative
KO
K17679
ATP-dependent RNA helicase MSS116, mitochondrial [EC:
5.6.2.7
]
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cne03029
]
CNJ00220
Enzymes [BR:
cne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNJ00220
Mitochondrial biogenesis [BR:
cne03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
CNJ00220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
3254163
NCBI-ProteinID:
XP_567279
UniProt:
Q5KAW6
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All DBs
Position
10:complement(join(53111..54709,54759..55162,55226..55355))
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AA seq
710 aa
AA seq
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MLPRQLSRAPRALGYVLPRFSPPSSVLRTVTPAFARSTQLSLRRILEKRGYAVSAVAEKD
DDFFSGAELAPSSNTVVIPPQLDDPGHPASEPLVDTVPFESLKGRINHDTLKALTVKPFK
FTAMSEVQKRVLGLLPHLSGGKLRSKAREEAEQEGEVEMKEEREDLLVKAKTGTGKTMAF
LVPAIDARINTLERLSKAPNPDGTIPDKHAQGRNHRAISRSHLGALIISPTRELATQIAV
EAEKLCTWHKDLTVHSFVGGESRLRQLKEFSRRSKDVVVATPGRLRDLISEPLVKDALAK
TDMLVLDEADTLLDMGFSEDLKFIIDHLPKERQTLFFSATVSKEIAAIARHSLRKGHKVI
DCVPKNESNVHLHIPQYATVVPSSADAMPHIMRLIAQDQMANPKSKIVLFLNTTKQTMLT
ATLVRELVDTLPAQTAVYEIHSKLDQNKRTRSSDKFRREHRPAVLVTSDVSARGVDYPGV
TRVIQLGVPSTTEQYIHRVGRTGRAGKEGRGDLVLFPFEAGFLDHLKGIPIQRISTSDLT
SDVIAKAPSSYASVIDSLPSAVESLLPTLDPKAVEEVFMSMLGYYHSKQQMLDASAQDIL
KGLKAWSVEGGGLIEPPYVSEEFLKKVGFSEKRRNTRNGGGGSRGGFGRSSGGFGRGSGG
FGKRDGGRREDSGGFGGRGQGGGGSGFGARRDGGGGFAGKSRSGGFKRDY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgctccccagacagctctcaagagcacctcgtgctctaggatacgtccttccccgtttc
tcccctccttcctctgttcttcgaaccgtcactcctgctttcgccaggtccacccagctc
tccttgagacgaattcttgagaaaaggggctacgctgtttctgccgttgccgaaaaagac
gacgacttcttttccggcgccgaactcgctccatcctccaataccgtggttatccctccc
caacttgacgaccctggccatcccgcctcagaacctctagtcgacaccgtcccattcgaa
tctctcaaaggtcgaattaaccatgatacactcaaagcgctcaccgtcaaacctttcaaa
tttaccgcgatgagtgaagtgcaaaagcgtgtgttgggacttttgccacatttgagtggg
ggaaagttgaggagcaaggcgagggaagaagccgaacaggagggtgaggtcgagatgaaa
gaggaaagggaagatttgttagtaaaggccaagactggtaccggaaagactatggcattc
ttggtccctgcgattgacgcacgcattaacactcttgaacgtctctctaaagcacccaat
cccgacggtaccattcctgataagcatgcccagggccgcaaccaccgcgccatctcccgt
tcccacctgggcgctttgatcatctctcctactcgagaactcgctacccagatcgcagtt
gaagcggagaaactctgtacttggcataaggacttgaccgttcactcattcgtcggtggt
gaaagccgactcaggcaattgaaagagttttcaagacggtccaaggatgtagtggtggct
acccccggccgattgagagatttgatctcagaacccctagtgaaggatgcgttggccaag
acggatatgcttgtgcttgatgaagctgatacgcttctcgatatgggtttctccgaagac
ctcaagttcatcattgaccatctgccaaaagagcgccagacattgtttttctctgcgact
gtttccaaagaaattgctgcgatcgctcgacactctttgcgaaagggccacaaggtcatc
gactgtgtccccaagaacgaatcaaatgtccatctccacatcccccagtacgccactgtc
gttccttcttctgctgacgcgatgccccacattatgcgactcattgcccaggaccaaatg
gcgaaccccaagagcaagatcgttttattcctcaacactaccaaacaaaccatgctcacc
gctaccctcgtccgcgagttggtcgatactttgcctgcacaaacagccgtctacgagatt
cactccaaacttgatcaaaacaaacgtacccgctcttccgacaagtttagaagggaacac
cgcccagcggtgctcgttacttctgatgtttctgctagaggtgtggattacccaggtgtg
acgagggttatccaacttggtgttccctcgactacggagcagtatatccaccgtgttggt
cgtaccgggcgagccgggaaggaaggtcgaggtgatctcgttctcttcccctttgaagct
ggcttcctcgaccatctcaagggcatccctatccagcgtatctccacttctgatcttacc
tcggacgtcatcgccaaggcgccctcatcatacgcctctgttattgactctcttccttcc
gccgtcgagagccttctccctactcttgaccccaaggctgtcgaggaagtcttcatgtcc
atgctcggctactaccactccaagcagcagatgttggacgcttcagcgcaggatatcttg
aagggtttgaaagcctggtcagtcgaaggcggtggtttgatcgaaccgccttacgtgtca
gaagagtttttgaagaaggtagggttcagtgagaagaggaggaacaccaggaatggaggt
ggtggatccaggggtgggtttggaaggagcagtggtgggtttggaaggggcagtggtggg
tttggaaagagggatggcggtaggagggaggacagtggaggttttggaggtagagggcaa
ggtggtggtggaagcggatttggcgctaggagggatggtggtggcggctttgcggggaag
agtaggagcgggggcttcaagcgagactattaa
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