Cryptococcus neoformans var. neoformans JEC21: CNJ00490
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Entry
CNJ00490 CDS
T00243
Name
(RefSeq) Eukaryotic translation initiation factor 2C 2, putative
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNJ00490
03036 Chromosome and associated proteins [BR:
cne03036
]
CNJ00490
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
CNJ00490
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
CNJ00490
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
CNJ00490
microRNA pathway
RISC loading complex
CNJ00490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoN
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
3254355
NCBI-ProteinID:
XP_567302
UniProt:
Q5KAU3
LinkDB
All DBs
Position
10:complement(join(127588..127596,127650..127838,127900..129019,129071..129227,129278..129791,129844..129888,129938..130029,130079..130340,130393..130537,130587..130634,130687..130768,130875..130892,130985..131063,131174..131191))
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AA seq
925 aa
AA seq
DB search
MAPKLAPQGDVTSAFSNLSFGDLPRGMQETLDGCPPRPGYGSSGKGITVNANMFMARFRK
QGLTVNHYDIEINPVIKTKEAKKPRPLLQKIWNQMVADATGPVKEALEAAAYDQQKSFYT
PHTLPMEGGKLEIIVGLVEDGIVPTDDRRRFRAVIQPAENMKIDLDTIMDYCKGDTQTEQ
ARDTMLRAVMAVNVLFRQDPAQRFTMSGAAGRKFFTDEDGTPLSNGAVLYKGFQQSFRWT
SAGFPAVQIDTAYSAFVEPGMLVDVAPKVLGLAPSGGFGGRGGRGGRGGPPRGGFMGAAP
GPARPIQELNPAQTKRLNDILRGAKFTVTHRKTERVFSIIKLTSQPADNIKFTLNGKDGQ
PDRTVSVAQYFQEQYNVRVTRPRLPCVQYGKNFIPMEFVKLEPFNSIPMMRITPDQTAEI
IKDAAKPPPMRQSAIAAWRQKLNYSNLPKLKAWQVEVNTNMMAVPARVLPAPSVIYEGNK
TIRANFGGWNMKGVRFTKAGKPLVSWAVISFDERCTVPDLQKFVTYFVNVLGQYNCPVQN
KRPVCFQYNPNAGGPNMGIKPALQQAAKNSYMETKANPQIIFCILPKKDPSIYQAIKACA
AEQLFKPVVTQCLQSLKIKSDRGIEQYCGNVAMKVHAKLGGLTHQVSHQLERTTMMVGAD
TGHPPAKGGALPPSIAVTVAAVNGENNRFVSGVRLQEGRVEIIQDLENMMATHIQTFEKN
TGAKPLSILFFRDGVSEGQYAHCVNQELKSIKKAAAKFGNYNPKVTFVICAKRHSMRFFA
SSDADKDRTGNLPPGTVVDSLVTSPIIHDFYLQAHAGLQGTARPTHYVVVADENKYSADK
LQGLVNVLCYSYARATRSVSLVPVAYYADIVAEKAREWIYNDDSETATVPSTASGSRVEQ
MSFDALRISKRFESNPEFNSVAWFM
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagctcgcacctcagggtgatgtcacctctgcgttctccaatctttccttt
ggggacctccccaggggtatgcaggagactcttgacggttgccctcctcgtcctggttac
ggatcttccggaaaaggcatcaccgtgaacgctaacatgttcatggcccgatttaggaaa
cagggtctcactgtcaaccactacgacattgagatcaaccctgtcatcaagactaaggaa
gccaagaagcctcgacctctcctccagaagatctggaaccagatggtcgccgacgccact
ggtcccgtcaaggaggctcttgaggctgctgcgtacgaccagcagaagtccttctacacc
cctcacacccttcccatggagggcggcaagctcgaaatcatcgttggtcttgtcgaggac
ggcattgtcccgactgacgacaggcgacgattcagggccgtcatccagcctgctgagaac
atgaagatcgaccttgacaccattatggactattgcaagggcgacactcaaactgagcag
gcccgagacaccatgcttcgtgccgttatggcggtgaacgtccttttccgacaggaccct
gctcagaggtttaccatgtccggtgctgctggccgaaagttcttcactgatgaggatggt
actcccctttctaacggtgccgtcctctacaagggcttccagcagtccttcaggtggacc
tctgccggtttccccgccgttcaaatcgacactgcctactctgcttttgttgagcccggc
atgcttgttgacgtcgctcccaaggttcttggtctcgcaccttctggcggttttggtggc
cgaggtggccgtggtggccgcggcggtcctcctcgaggtggctttatgggcgccgctcct
ggtcctgcccgaccaatccaggaattgaaccctgcgcagactaaacgtctcaacgacatc
ctccgaggcgccaagttcaccgtcacccatcgaaagactgagcgtgtcttctccatcatc
aagttgacttcccagcctgctgacaacatcaagttcactctcaacggcaaggacggtcag
cctgaccgaactgtttctgttgctcagtacttccaggagcagtacaacgtccgagttacc
cgacctcgtcttccttgcgtccagtacggcaagaacttcatccccatggagtttgttaag
cttgagcctttcaactctatccctatgatgaggatcacccctgaccagaccgctgagatt
atcaaggacgctgctaagcctcctcctatgcgacagagtgctatcgccgcctggaggcag
aagcttaactattctaacctccccaagcttaaggcttggcaggtcgaggtcaacaccaac
atgatggctgttcccgctcgagtcctccccgctccttccgttatctacgagggtaacaag
accatcagggccaacttcggtggctggaacatgaagggtgtccgattcaccaaagccggc
aagcctcttgtctcttgggccgtcatctcctttgacgagcgatgtaccgttcctgatttg
cagaagtttgtcacctactttgtcaacgttttgggtcaatacaactgtcccgtccagaac
aagcgacccgtttgcttccagtacaaccctaacgctggtggacccaacatgggtatcaag
cccgctttgcagcaggctgccaagaactcctacatggaaactaaggccaacccccagatc
atcttctgtatccttcccaagaaggatccctcaatctaccaggctatcaaggcttgtgct
gccgagcaacttttcaagcctgtcgttactcagtgtctccagtctttgaagatcaagtcc
gaccgcggtatcgagcaatactgtggtaacgtcgccatgaaggttcacgccaagctcggt
ggactcacccaccaggtttctcaccagctcgagcgaaccacaatgatggtcggtgccgac
accggccaccctcccgccaagggtggtgctcttcctccttctatcgccgtcaccgtcgcc
gccgtcaacggtgagaacaaccgattcgtctctggtgtgcgactccaggagggccgagtt
gagattatccaggatcttgagaacatgatggctactcacatccaaacctttgagaagaac
actggtgctaagcctctcagcatcttgttcttccgagacggtgtctctgaaggtcaatat
gcccactgcgtcaaccaagagctcaagtccatcaagaaggccgctgccaaattcggcaac
tacaaccctaaggttacctttgttatctgtgccaagaggcactctatgcgattcttcgcc
tccagcgatgccgacaaggacaggaccggcaacttgccccccggaaccgtcgtcgactct
ttggttacctctcccatcattcacgacttttatttgcaagcccacgctggtttgcagggt
actgctcgacctactcactacgttgtcgtcgccgacgagaacaagtactctgccgacaag
ctccagggtttggtcaacgtcctctgttattcttacgcgcgagctacccgatccgtctct
cttgtgcctgtcgcttactacgccgacatcgtcgccgaaaaggcccgagagtggatctac
aacgatgacagcgagaccgctaccgttccctccaccgcttctggttctcgagttgagcag
atgtccttcgatgctctccgaatcagcaaacgattcgagagtaaccccgagttcaacagt
gtcgcttggttcatgtaa
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