Cryptococcus deneoformans JEC21: CNJ00810
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Entry
CNJ00810 CDS
T00243
Name
(RefSeq) RNA polymerase III transcription factor, putative
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNJ00810
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
CNJ00810
TFIIIC, fungi type
CNJ00810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_8
TPR_1
TPR_16
TPR_17
TPR_12
TPR_11
TPR_6
NatA_aux_su
TPR_9
TPR_20
ARM_TT21_5th
TPR_21
TPR_15
Motif
Other DBs
NCBI-GeneID:
3254275
NCBI-ProteinID:
XP_024513652
UniProt:
Q5KAR1
LinkDB
All DBs
Position
10:join(233904..234082,234127..234265,234314..234579,234626..234749,234803..235276,235326..235554,235601..235702,235750..235997,236053..236149,236198..236416,236473..236991,237041..237165,237221..237403,237473..237586)
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AA seq
1005 aa
AA seq
DB search
MSADFAIDPALLDENVTGVSSPLQDLGTSDSDDLYGDSDNEYQDSQPDEVGEPDSDVVFG
RLAGLASKTASGKGKINNAEFQRELELADEEELPQSRRSGKAPQKQPRRAHKPSHEVNYL
LGQANGAYLVEDYDKAISSFLEVIRLDPYVPAAWVTLSSCYKELGDEEKARQMRFLGAHV
DDEGDLWRELAQEFREIGHLEQSVYCIRKALKCEPDQIDLLWDLGAIYRIQGQKTRGCNV
FRAMLQIEPELANNFEFISTFHPLLVSMNLRGLVAQTTRRGFDYQIATYPSPNQRPRVSD
APPPMTYENITTLIDDLLALEEYEDALVVVKQGQRWLQGRAEQKGWDTMDDDREYDPPGT
IREEVESEGFEMDVGMRHRLALLRIKLDDAHEADIHIDHLLSLDVLTHYTYLQELGDALM
TRDQWERALDCFGAVQECEELPDDPPLIYKIGVCQWKMGDLDEALEALQWVASEVPDNLE
AKLRIANVLEDMGRKAEALDIVTEVIRTRGERGTLSSTIQMQPGVRVSKRMLEEQLRSQM
QNLWADVQEAERGTMEGEEGALERFVESAGLLIENYRMDRSNFTKNRGMVRVLKSKKYKK
TDVDDQAAEMQDRLERTLGLEEVDDDNPYHVFRKTSFYGLSNEEWLTLVVKYCCVLMVRR
EEEVAMDILEHVVWSGLFHNRRCEIALRLTIIACAMRLKAYDKIVDSARKLALRSQFLPQ
PFLIMLAAISTGGSAARAVFTDTSLQNFINRDIRAYDEAVRNGDKGLHYLEGKGRWSANK
GKTKGESKGGDGKKKGGKKSKGKKKADAQIDPDLDEEEEAEDRVYGVEGEIGWGYKPVLP
KKFSPYLNVILGQEMLASKAFKGAIFYLTRAYELDPWNPFICLLIAQAYLGRAMTRQSDN
KNYQIAQGMVFLSQYRKLSPASGPGMEEVEYNFGRAFHSIGVPHFAVKHYEKVLDSVQKR
MDESMFPEEVRKSSLAWEAAHNLMLLYSMAENMALVKEKSKWLAI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgacttcgctatagacccagcactactggacgaaaatgttaccggagtgtct
agtcctctgcaagaccttggtacatctgacagtgatgacctgtatggagattcagacaac
gaatatcaggactcacaaccggatgaggttggagaaccggacagtgatgttgtttttgga
cgactggcaggattagcgtcaaaaactgcgtctggcaaggggaagatcaacaatgcagag
tttcaacgtgaattagaattagcagacgaagaagaacttccgcagtctcgccgttcaggc
aaagcaccacagaaacagcctcgacgagcacacaaaccctcacatgaggtgaactattta
cttggtcaagcaaacggggcttatctggttgaagattacgataaagccatttcaagtttc
cttgaagttatccgactcgatccatatgtaccggcggcttgggtcaccctttcaagctgt
tacaaagagctcggtgatgaagagaaggccagacagatgagatttttgggtgcacatgtg
gatgacgagggagatctttggagagaactggcacaagaattcagagagattggacatctg
gagcaaagtgtctattgcataagaaaggctctcaaatgtgagcctgaccagattgatctc
ttatgggatctgggagccatatatcgtatccaaggtcaaaagactcgtggatgtaatgtt
ttccgtgcgatgctacaaatcgagcccgaattggcgaataactttgagtttatctccact
ttccacccactccttgtctcaatgaatctgcggggactagtagcgcagacaaccaggaga
ggttttgattatcaaatagcaacctatccctcaccgaaccaacgccctcgagtctccgat
gctccaccccctatgacttatgagaacataaccaccctcatagacgatcttttagccctg
gaagagtacgaagatgcgctagtagtcgtcaagcaaggtcagagatggctacagggaagg
gcagagcagaagggttgggatactatggatgacgatagagaatatgatccaccggggacg
atcagagaagaagtggaaagcgaaggattcgagatggatgtgggcatgaggcatcgtctg
gctctcttgcgtataaagttggacgacgcccacgaggcagacattcacatcgatcacctg
ctcagccttgacgtgctcacacattacacgtatctccaggaattgggagacgcgctcatg
actcgtgatcaatgggagagagctttggattgctttggggctgtccaggaatgtgaagag
ttgcccgatgatccaccactgatatataaaatcggtgtctgtcagtggaagatgggtgac
ttggacgaggctttagaggcgttgcaatgggtggcaagtgaagtgccagacaacttggag
gcgaagctgaggatagcaaacgttttggaggatatgggtagaaaggctgaagctttggac
attgtaacagaagtcatccgtactcgtggtgaacgcggcacactctcttccacgattcaa
atgcagccaggcgtaagagtatccaaacggatgcttgaagaacaacttcgttcgcagatg
caaaacctttgggccgatgttcaagaggcagaaagaggtacgatggagggagaagaaggg
gcgctcgagaggtttgtagagagtgcgggcctgctgattgaaaactatcgaatggataga
tcgaattttacgaaaaatcgaggcatggtgagagtgcttaagagcaagaagtacaagaag
acggatgtagatgatcaagctgcagaaatgcaagatcgtttggaaagaaccctgggattg
gaagaggtcgacgatgataatccctaccatgttttccgcaaaacgtctttctatggcttg
tccaatgaagagtggttgacccttgtcgtcaaatattgctgcgttttgatggttaggaga
gaagaggaagtagccatggatatcttggagcacgtcgtctggtcggggttattccataat
cggcgttgtgagattgccttgaggctgactatcattgcatgtgcaatgaggctgaaagcc
tacgacaagatagttgattcggcccgaaaactcgctcttcgttcccagttccttcctcaa
ccatttctcatcatgcttgcagccatttccactggaggctctgcagcccgtgcagtattc
accgacacctctcttcaaaatttcattaaccgagacatcagagcgtacgacgaggcagtc
aggaatggggataagggtctgcattatttggagggtaaaggtagatggagtgccaataaa
gggaagactaagggagagagcaagggaggcgatggaaagaaaaaaggcggaaagaaatcc
aaagggaagaagaaagccgatgctcaaattgacccagaccttgatgaggaagaagaggct
gaagatcgggtctatggtgtagaaggggagatcggatggggctataaaccagttttaccc
aagaaattctcgccatatctaaatgtgatattggggcaagagatgcttgcttctaaagcc
ttcaaaggggccatcttctatctgacaagagcatacgaacttgatccatggaatcccttc
atctgccttctgatcgcacaagcataccttggacgagccatgacacgtcagtctgataat
aagaactatcagatcgctcaagggatggtcttcttgtctcaatatcgcaaactttctcct
gcttcaggccccgggatggaagaagtggaatataactttggtcgtgcatttcattctatc
ggtgtaccccattttgcagtaaagcattacgagaaggtgttggatagtgtgcagaagagg
atggacgagagtatgtttccggaggaagtcaggaaatcatcgttagcttgggaggcagct
cacaatctgatgttgctgtattcaatggcagagaacatggcgctagtgaaagagaaatca
aaatggctggctatctag
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