Cryptococcus deneoformans JEC21: CNK00830
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Entry
CNK00830 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K13192
RNA-binding protein 26
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cne01009
]
CNK00830
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNK00830
03041 Spliceosome [BR:
cne03041
]
CNK00830
Protein phosphatases and associated proteins [BR:
cne01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CNK00830
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
CNK00830
Spliceosome [BR:
cne03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
CNK00830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
zf_CCCH_4
zf-CCCH
Nup35_RRM_2
RRM_3
Torus
Motif
Other DBs
NCBI-GeneID:
3254407
NCBI-ProteinID:
XP_567646
UniProt:
Q5K9T5
LinkDB
All DBs
Position
11:join(266078..266145,266205..266292,266350..266386,266443..266682,266734..267701,267753..268016,268068..268229)
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AA seq
608 aa
AA seq
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MPFNDELDTPAFRAWLSRTIEPLCDADPTVLSDYIVALMKHDASMTEDEWKTFISRELVD
FLESSSGPFVETLFQTLHSKNYDLTQTLPVPAAASHPIPTGPAAEVAPRPSAGPSTMQNG
QQKDVIMQEMPVGVSGRRKCRDYHERGYCMRGANCQYEHSADMLIPTPEMMFQGFLPPFM
PGMPGVPIQYQGMQPMRPMAMQVPEFRDNPNGRNRSFGNRPPPSNEGESFEGSSRPPSDH
SKTTLLITDIPDANMSVVAIRNYFQQFGTITSVALEGRGNRALVSFASNLEAYKAWKSDE
AVFGNRRVKVLWHKPRPGQGAAGQKALEQSKQLLENLQKMEAGEGPNQGIKPKLSGPETR
LQATLAELEHREKQSKKEPLIAEQKVLLKRASTGTKEEKVQILKRLREITKELDIINNPP
PKPESMDVDDAKSRLDRELAAHGMEMGGQDEEELARLNAQLASLKEKANTLGVNASARYS
PYSRGRGGRGRGRGGPPRPMRLDNRSRTILVSGDRFGDEEARRVVQEWYESTGGGVEFVD
GSLRITYPQREMAEKALALGTNELREKAGPIRTAWEPLKPLERYQPSDVEMTVHMGEEEL
RGEKDDDE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcctttcaacgacgagttggacactccagcatttagggcgtggctcagcagaaccatc
gagcctctatgtgatgccgatcctacagtcctctcagattatattgtggctttgatgaag
cacgatgcttccatgacagaagatgagtggaaaactttcatatcacgagaactggtggac
tttctcgagagctcttctggaccattcgtcgagacactgttccaaacacttcactccaag
aattacgatttgacacaaacacttcctgttccagcagcagcatcacatcctattcctaca
gggcctgccgcagaagtagcacctcgaccatctgctggaccttcaacaatgcagaatggt
caacagaaagatgttatcatgcaggaaatgcccgttggagtatctggtagacgaaaatgc
cgtgattatcacgagcgaggatattgtatgcggggcgcgaactgtcaatatgaacattct
gcggatatgctcatacccacacccgagatgatgttccaaggatttcttccacccttcatg
cccggcatgccgggtgtacccatacaatatcaaggcatgcagcctatgcgtccaatggcc
atgcaagttccagagtttcgagataatccaaatggccgaaaccgttcctttggcaaccga
ccgcctccctccaacgaaggcgaaagcttcgaagggtcctcccggcctccgagcgaccac
agcaagacaacgcttctcattaccgacatccccgacgccaatatgtctgttgtagctatt
cgcaattacttccaacagtttgggacgataacgagtgttgcgcttgaaggtcgaggaaac
cgggctttggtcagcttcgcgtcaaacctcgaggcctataaggcatggaaatcagatgag
gctgtgttcgggaataggcgtgtcaaggtcctctggcataagcctaggcctggacagggt
gcggcaggacagaaggctttggaacaaagcaagcaactgttagaaaacttgcagaagatg
gaggctggagagggtccaaaccaggggatcaagcctaagttgagtgggcctgagactcgg
ttgcaggctaccttggccgagttagagcatcgagaaaagcaatcaaaaaaggagcccctt
attgctgagcaaaaagtgctgttgaagcgtgcgtccacaggcacgaaagaagagaaagtc
cagattttgaagagactgcgagaaataacgaaggagcttgatatcatcaacaatccgccg
cctaaacctgagtccatggatgttgatgatgctaagagccggttggatagggaactcgcg
gctcacgggatggaaatgggtggacaggatgaagaggaattggcgaggctaaacgctcaa
ctggcttctttgaaggagaaggccaacaccttgggtgtcaacgcttctgctcgttactcg
ccatactcccgtggccgaggtggacgcggacgcggtcgtggtggtccccctcgacccatg
cggctcgacaaccgatcgcgcaccatcctcgtctctggtgaccgtttcggcgacgaagaa
gctaggagagttgtccaggaatggtatgagtcaacaggcggtggtgttgagtttgtcgat
ggcagcttgagaatcacctaccctcagcgcgagatggctgaaaaggctttggccctcggt
acgaacgagttacgcgagaaagcgggccccattcgtaccgcttgggaacccctgaaaccc
ctcgagcgataccagccttcagacgtagaaatgactgtgcatatgggcgaagaagagctc
agaggagaaaaagacgatgatgagtag
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