Cryptococcus deneoformans JEC21: CNK00950
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Entry
CNK00950 CDS
T00243
Name
(RefSeq) Pol II transcription elongation factor, putative
KO
K07739
elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:
2.3.1.311
]
Organism
cne
Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cne03016
]
CNK00950
Enzymes [BR:
cne01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.311 tRNA carboxymethyluridine synthase
CNK00950
Transfer RNA biogenesis [BR:
cne03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
CNK00950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM_C
ELP3_N
Radical_SAM
Acetyltransf_10
Acetyltransf_1
Acetyltransf_7
Ivy
Motif
Other DBs
NCBI-GeneID:
3254413
NCBI-ProteinID:
XP_567783
UniProt:
Q5K9S3
LinkDB
All DBs
Position
11:join(297631..297965,298019..298082,298133..298242,298304..298417,298471..298609,298687..299367,299429..299570,299634..299722)
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AA seq
557 aa
AA seq
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MIAPTTSQSELHLLCVSAVVRDLISTYNSSSSSATQPPNVNSLRAKYAKKYGLKAVPRLT
DVLAAVPEEWKDRLRGWLRAKPVRTASGVAVVAVMCKPHRCPHVAMTGNICVYCPGGPDS
DFEYSTQSYTGYEPTSMRAIRARYDPYEQARGRVNQLRDLGHSVDKVEIIIMGGTFMSMP
EDYRHKFIAGLHNALSGHTGEDVDEAVKFSEQSKVKCVGITIETRPDYCLKPHLSQMLRY
GCTRLEIGVQSVYEDVARDTNRGHTVRAVSESFHMSKDAGYKIVAHMMPDLPNCGTERDI
WQFQEFFENPAFRSDGLKLYPTLVIRGTGLYELWRTGKYKNYPPNALVDIVARIMALVPP
WTRVYRVQRDIPMPLVSSGVENGNLRELALARMKDFGAECRDVRYREVGLHEIHHRVRPR
DIELIRRDYAANGGWETFLSYEDPQSDILVGLLRLRKCSEEGTFRKELVGMQGGCSLVRE
LHVYGTAAPVHSRDPKKFQHQGIGTLLMEEAERIAREEHGSGRIAVISGVGTRDYYRRLG
YFLDGPYMVKDLLYDDE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcacccacaacctcacagtcggaactgcaccttctatgtgtatccgccgtggtc
agagacctcatctcaacctataattcctcaagcagctccgccacccagcctccaaacgta
aacagtcttcgagcaaaatacgcaaaaaaatacggactcaaggcagtccctcgtttgaca
gatgtcctcgctgctgtccctgaagaatggaaggacaggctgaggggatggctgagagca
aagccagtcaggacggcgagcggtgtggcagttgttgctgtcatgtgcaaaccccatcga
tgtcctcacgtagccatgaccggaaacatctgcgtctactgccccggcggtcccgactct
gactttgaatactcaacccagtcatacactggatatgagcctacttctatgcgagccatc
cgggccagatatgacccatatgagcaagcgcgtggacgtgtgaaccagctccgtgacctt
ggacacagcgtcgacaaggttgagatcattatcatgggaggaacgttcatgtccatgccg
gaagactaccgccataaattcattgctggacttcacaatgccttgagtggtcacactgga
gaggacgttgacgaggctgtcaaattctctgagcaaagcaaggtcaaatgcgttggtatc
actattgaaactcgtcccgattactgcttgaagcctcatctgagtcagatgttgaggtat
ggatgcacccgtctggaaatcggtgttcaatcagtctatgaagacgtggcacgagacacc
aaccgaggacacactgtccgagctgtcagtgaatccttccacatgtccaaagacgccggc
tacaagattgtcgcccacatgatgcctgacctccccaactgcggtaccgagcgagacatt
tggcaattccaagaattctttgaaaaccccgctttccgctcagacggtctcaaactgtac
ccaaccttggtcatccgtggtaccggtctttacgaactgtggaggactggcaagtacaag
aattaccctcccaacgcccttgtcgatatcgtagcgaggatcatggcgctcgtacccccc
tggacgcgagtctaccgcgtccaacgagatatcccgatgccgctcgtctcttccggcgtg
gagaatggtaatttacgtgaactcgcacttgcgcgtatgaaggatttcggtgccgagtgt
cgagatgtgcgataccgtgaggtcggtctgcacgagattcaccaccgtgtgcgaccgcgt
gatatcgagcttatccgaagagattacgcggcgaatggcggatgggagacgttcttgtcg
tatgaggatcctcagtctgatatcttggtcggtcttttgaggttgagaaagtgttcagag
gaagggacgtttaggaaggagttggttggtatgcaaggtggatgcagccttgtgcgagag
ctgcacgtgtatggtactgctgcacccgttcactctcgtgaccccaagaaattccagcat
caaggtatcggtacattgttgatggaagaggcggagcgtatcgcccgtgaggagcacggt
agcggtcggatcgctgtaatctctggtgttggaacgcgtgattactatcgacggcttggt
tactttctcgatgggccttatatggtcaaggatcttttgtacgatgacgagtag
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