KEGG   Cryptococcus deneoformans JEC21: CNK01320
Entry
CNK01320          CDS       T00243                                 
Name
(RefSeq) purine nucleotide binding protein, putative
  KO
K10754  replication factor C subunit 1
Organism
cne  Cryptococcus deneoformans JEC21
Pathway
cne03030  DNA replication
cne03410  Base excision repair
cne03420  Nucleotide excision repair
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNK01320
   03410 Base excision repair
    CNK01320
   03420 Nucleotide excision repair
    CNK01320
   03430 Mismatch repair
    CNK01320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cne03032]
    CNK01320
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNK01320
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CNK01320
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CNK01320
SSDB
Motif
Pfam: RFC1 BRCT AAA Rad17 AAA_22 nSTAND3 AAA_30 RuvB_N AAA_16 AAA_14 AAA_5 AAA_33 AAA_24 RNA_helicase AAA_28 AAA_assoc_2 AAA_18
Other DBs
NCBI-GeneID: 3254402
NCBI-ProteinID: XP_567811
UniProt: Q5K9N8
LinkDB
Position
11:join(390348..390428,390482..390493,390547..390726,390780..391052,391100..391290,391347..391514,391570..391896,391949..392065,392114..392360,392413..392538,392593..392678,392730..392777,392827..392964,393018..393174,393228..393493,393554..393716,393766..393917,393968..394076,394131..394295)
AA seq 1001 aa
MSSKADSPKKKPANKADGPAGKDIRGFFTSGNSQKTSVTKQVATKSGSGKKPITINDSDD
EPEEVVKTQSSSKAVPPSSAPNSTASKHFGSKAIVLSSDDEPAPARSKSVTKSASGAASK
PVLTRKPALAKRKILSDSESEEEYYKPQRKRQSLGGRAGKESDDQGTKSTKKGKTKNDDD
FGPVDVDNEDEYNFDDEDEPREKPKPKSTANKSPAAPKKSTSVKKPAEPKTAKMEEPEKK
EEKKFDWRAAAAARAAGPKAPGSKEIPEGAPDCLAGLTFVFTGEMESLGREDAQELVRRY
SGKVTTAPSGKTSYVVVGENAGVSKLNKVKEKKIPMINEDEFLELIRQRSSGKGPDGTVD
KAAVEKATKAREKEEKKILEQAKEMEEREKKEEKERIRKQKALEGQGMAVKKMGPASAQL
WTTKYAPTSLKEICGNKAPVERLGQWLQDWQKNYKANFKKPGKDGMGIYRAVLISGPPGI
GKTTSAHLMAKEAGYTPLELNASDTRSKKLIENETNVDNKSLDGFFKGQGVGDINAAGLK
IDSRTCLIMDEVDGMSAGDRGGVGALNTLIKKTKIPMILICNDRTLQKMKPLQSTTFNMT
FRRPQPNEIRSRIMSILHKEKLKIPPNVVDELVKGVNSDIRQVLNMLSTFKLGKSEMNFD
EGKQLVKVNEKNTIMTPFTIIDRLTGPYAFSKNSKETLGDRIELYFHDFSFVPLFMQEHY
LKTNPTVLNNLDGPEKNLKHLELVSKAADSISDGDLIDRMIHGSEQHWSLLPLHAVASTV
KPAMHVYGAMRSQGGGWGSWGPAFPQWLGQNSKQNKLQRQLTDIQIRMRLRVSGSREEIR
EQYMPLLASKIVSPLIDRGAAAVEETIEYMDEYYLGKDDWDAFVELGVDTMRDEDILKKI
PSATKASFTRQYNKTDHPIAFHKGDMFAGAKKKIDAGPVPDNEDVFEEDEPVPDEPEEDT
DEEEDPLQDKLVKAVKPKGKAAAKSASKPTAAKGVKSKAKK
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgtcttcaaaagcagattctcccaagaagaagcctgccaacaaggctgatgggccggct
ggcaaggacattcgtggtttctttacttcaggaaattcgcagaagactagtgtaacaaaa
caagtagcaactaaaagtggttcaggcaagaaaccgattacgatcaatgacagcgacgac
gagcctgaagaggtcgtaaagacgcaatcgtcttccaaggctgttcccccttcatctgcg
ccaaacagcactgcatcaaaacactttggatccaaggcaatcgtgctctcgtcggacgat
gaacctgcgcctgccagatcaaaatctgtcaccaaatccgcatccggggctgcctccaag
ccagtactgacacgaaaaccggcattggcaaagcgtaaaatccttagcgactccgagtct
gaggaagagtattacaaaccgcaacggaagagacaaagtctaggaggaagagctggcaag
gaatctgatgatcaaggcacgaagagcaccaagaaggggaaaacgaagaacgacgacgac
tttggcccggtggatgttgacaatgaagatgagtataatttcgatgatgaagacgagcct
cgggaaaagcccaagccaaaatcaactgcaaacaagtctcctgctgctcctaagaagtct
acgtcagttaaaaaaccggcggaacctaagactgctaagatggaagagccagagaagaag
gaagaaaaaaagtttgactggcgagcggcagcggcagcgcgtgctgctggtcctaaagcc
ccaggatccaaggaaatccctgagggtgcgcctgactgtcttgcaggcctcacgtttgtt
ttcacaggagagatggagagcctgggaagggaggatgcgcaggagctcgtcagacggtat
tctggaaaagttaccacggccccttctggaaaaacttcttacgtcgtagtgggcgaaaac
gctggtgtctcaaaactcaacaaggtcaaagagaagaaaattcctatgatcaacgaagat
gaattccttgaacttattcgtcaaagatcttctggcaaaggacccgatggaacggtagat
aaggcggctgtggaaaaagcgactaaggcaagggagaaggaggagaagaaaatcttggag
caggctaaagagatggaagagagggaaaagaaagaggaaaaggagagaataaggaagcag
aaagctctggaaggacaaggtatggctgtcaaaaaaatgggtcctgcatcagcccagctg
tggacgaccaagtatgctcctactagtttgaaggagatttgcggtaacaaagctcctgtt
gaacgcctgggtcaatggctgcaagactggcaaaagaattacaaggcaaatttcaagaaa
cccggcaaagatggtatgggcatttatcgcgctgttctcatttccggtcctcctggtata
ggcaaaacaacttcggctcatctaatggcaaaagaagccgggtacactccattagaactg
aatgcgagtgacactcgaagcaagaagctaatcgagaatgaaacaaatgtcgacaacaag
agtttggatgggttcttcaagggtcaaggcgttggtgatataaatgccgcggggttgaag
attgactctagaacctgcttgattatggacgaagtagatggaatgtccgcgggtgacaga
ggtggtgtcggcgctctgaacacattgatcaagaagactaagatcccaatgattttgatc
tgtaacgatcgcacattacaaaaaatgaagcccctacagagcacgactttcaacatgact
tttaggagaccccagccaaacgagattcgctcaaggattatgtctatcttgcacaaggaa
aagctcaagattccacccaacgtcgttgacgagcttgtgaagggagttaattctgatatc
cgtcaagttttgaacatgctctccacgtttaagcttggtaagagtgaaatgaattttgac
gaaggaaagcaattggtcaaggtcaatgagaagaacacaatcatgacgccttttactatc
atcgatagattgacaggcccatatgctttctccaaaaatagcaaagaaacgttgggtgat
agaatagagctatacttccacgatttcagttttgtgcctcttttcatgcaggagcactac
ctcaaaacgaaccctactgtcttaaacaacctcgacggtcccgagaagaacctcaagcac
cttgaattagtatccaaggctgcggactctatatccgacggtgatttaattgatcgcatg
attcacggctctgagcaacattggtctcttttaccgctgcatgctgtagcttccacggta
aagcctgccatgcacgtgtatggtgcaatgaggagtcagggtggtggttggggcagctgg
ggtcctgctttccctcaatggctggggcaaaattcgaagcagaacaaacttcaaagacaa
cttacggatattcagattcgtatgcgtttgcgggtgtcaggaagcagagaggagattaga
gagcagtacatgcctctcttggccagcaagattgtatctcctctcattgatcgtggtgct
gcggctgtggaagagacgattgagtacatggacgaatattatcttggaaaagacgattgg
gatgcatttgtcgaacttggtgtggatacgatgcgggatgaggacatcctgaaaaaaatc
ccaagcgccacgaaggcctctttcaccagacagtacaacaagactgatcaccccatcgcg
ttccacaagggtgacatgtttgcgggggcaaagaagaagattgatgctggaccagtgccg
gacaatgaggatgtttttgaagaagacgagcctgtgccggatgagccggaggaggatacg
gacgaagaggaggatccgttacaggataaattggtcaaagctgtaaagccgaaaggtaaa
gccgcggccaaatctgcatcaaaaccgacggcagccaagggagtaaagtcaaaagctaag
aagtaa

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