KEGG   Cryptococcus neoformans var. neoformans JEC21: CNL04240
Entry
CNL04240          CDS       T00243                                 
Name
(RefSeq) mismatch repair-related protein, putative
  KO
K08740  DNA mismatch repair protein MSH4
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cne03036]
    CNL04240
Chromosome and associated proteins [BR:cne03036]
 Eukaryotic type
  Meiosis-specific proteins
   Others
    CNL04240
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_II
Other DBs
NCBI-GeneID: 3254837
NCBI-ProteinID: XP_024513821
LinkDB
Position
12:join(178694..178907,178963..179012,179062..179076,179143..179158,179217..179423,179489..179561,179612..179718,179790..179876,179942..180013,180067..180105,180159..180220,180285..180311,180372..180524,180584..180629,180677..180829,180889..180906,180949..181072,181129..181153,181202..181301,181346..181371,181434..181479,181527..181538,181598..181626,181682..181749,181805..181852,181903..181971,182034..182098,182149..182211,182249..182286,182335..182409,182459..182529,182583..182601,182655..182745,182803..182895,182944..182999,183050..183208)
AA seq 871 aa
MPVPAQLRTIAPEKIKAAVSPSAISAFTQTRHRPGAGSANNKLQATTRPSTRASARIEDV
SSYVVALLQGKGHGVEIGIAAISLLTGQTVITQVADNASFEKTVQQLYSHPPNTIIVPDT
MLKSGAAEASYGDQRDINVKEHLMSRLEDEYEIECIGVDRSHWNRETGRDFVEDLAVDDE
LKASILMAIENKFYALCALSGLFRYLQVWRNIEFPERSLRMKYVVSEGTMFIDIETAKNL
ELVRNNLTNKATHTLYSVLNHCHTPMGMRLLRTCILQPSNVLSDIEGRLDAVQELVTAQE
KLTVLRSKLSVMSKMDLESIVAQISHQNLSQTDVAMTDRRISLLLNLVDYLQSVKSINAE
LAGGHCKLLGMIARRLSDKQLGKLSSIINNCLSRDSTTLRKNGKHQNARIARLFAVKAGF
APLLDVARQTYQENLQDIYDLELEVNGKYGLSCQVESVGGTFQFSIPSGQPENLLPSEFI
GTEKAKHKIRFTSQELLKRCAKLSQSHQEVLLISGQTINDLIAQVKGNLGGLYHCAEAIA
SLDMIASFAFSAFNSNYIRPDFKDTLAIHGGRHPILDNLLGAGDCIPNNVYAARGSATFQ
IIQGPNMSGKSTYLKQVGLLTVQAMIGCFVPAEYACFTIHDALLSRLSNDDSMEKCLSTF
ASEMAASAMILGLASPRSLVLIDELGRGTSSLEGMGLSYAIAESLIRRQSFVFFATHFQD
LAVILGNLSGVVKLHLKVQHCNTETLSPTEFGSTFAYKVAEGAAPMVHYGLEIAKLAALP
STVLQRASEIATQLSELEEQGRRSNLANTSMRRRKILWELRAKLKQVQSNSRLDNETLGE
FLLNLQAQCYLTLRQSLEMVQTTTSGSETGH
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgcctgtccccgctcaactgcgcacaatagctccagagaaaatcaaggcagccgtctct
cctagcgcgatctcagcgtttacacagacacgtcatcgtccgggggctggctctgctaat
aataaacttcaagccacaacaaggccttctacaagagcttctgctcgcattgaagatgtc
tcttcctatgttgttgctttgcttcaaggcaaaggtcatggagttgaaattggtatagct
gcaataagtttattgaccggtcagactgtcatcactcaagttgctgacaatgccagcttt
gaaaaaactgtacagcagctttattcccatccacctaacacaatcattgttccagatacc
atgttaaagagtggagctgcggaagccagttacggtgaccagagggatatcaacgtaaag
gagcacctcatgagtaggctagaagacgaatatgagattgaatgtattggtgtggaccgc
agtcactggaatcgagaaactggccgtgattttgtcgaggacttggcagttgatgacgag
ctcaaagcatctatccttatggctattgaaaacaaattctatgccctatgtgctctttct
ggattgttcagatatttacaggtatggaggaacattgaatttccggagcgcagtctgagg
atgaaatatgtggtctctgaagggacgatgttcattgatattgaaactgccaaaaatctg
gagctcgtgcgcaataatctcacaaataaggccacccatacgttgtactctgttttgaac
cattgtcatactcctatgggtatgcgacttcttaggacatgcatactccaaccaagcaat
gttcttagtgatatagaaggaagacttgatgctgttcaggaacttgtgacagcgcaagag
aagctcacagttttgaggtcaaagttgtctgttatgtctaagatggatttggagtccatt
gttgctcagatttcacatcaaaatctgtcacaaacagatgtggctatgactgatcgcagg
atatctctgctgctcaaccttgtggactacttacagagcgtcaaatcaatcaatgctgag
cttgcaggaggacactgtaaattgcttggcatgattgctaggcgcctttccgataaacaa
cttggcaagttatccagcattatcaacaactgtctttccagagattcgacaacgttgagg
aaaaatggaaaacaccaaaatgccagaatcgctcggttgtttgctgtgaaagcaggtttt
gcacctctgctggatgttgctagacagacctaccaggagaatcttcaggatatctatgac
ttggaattagaagtcaatggaaaatatggcttgagctgccaagttgagagtgtgggaggt
acatttcaatttagcataccgtcaggacagcctgaaaacttgctaccatctgaatttatt
ggtactgaaaaggctaagcacaaaattcggttcacaagtcaagagcttctcaaacggtgt
gcgaaactgtcccaatctcatcaagaggttctgttgatcagtggacaaaccatcaatgat
cttatcgcgcaagtgaagggaaacttgggtggactatatcattgtgctgaagctattgca
agtcttgacatgatcgcaagctttgcctttagtgccttcaacagcaactacattcgtcca
gatttcaaggatactctagcgattcatggtggccgccatccaattttggacaatttactt
ggtgctggtgattgtataccaaacaacgtttatgctgcaagaggttctgccacttttcaa
atcattcaaggtcctaatatgtcgggcaaaagcacttatctaaagcaggtagggcttttg
actgtacaggctatgattgggtgctttgtacctgcggaatatgcatgctttacaattcat
gatgctcttttgagtcgtttatcaaatgatgattcaatggagaaatgtctatcaaccttt
gcctcggaaatggctgcatcagccatgatactgggactcgcaagtcctaggtcacttgtt
ctcatagatgaattggggaggggcacttcaagtctggaaggcatgggattatcctatgcc
atagctgaatcgctcattaggaggcaatctttcgtctttttcgcaactcatttccaagac
cttgcagtaattcttgggaatctgtctggagttgtaaaactacacctaaaggtccagcat
tgcaatacagaaaccctttcaccaacagaatttggcagtacttttgcctacaaagttgct
gagggtgcagctccaatggtgcactatggcctcgagatagctaaactagccgcccttcct
tcaacggttttgcaaagagcatcagagattgcaactcaactgagtgaattggaagaacag
ggtaggcggtccaacttagccaacactagcatgcgacgccgaaagatactgtgggagttg
agggccaaactgaagcaggtgcaaagtaattcaaggcttgataatgagacattgggagaa
tttcttctgaatcttcaagctcaatgttatctgactcttcgtcaatccctagagatggtt
caaacaacaaccagtggtagtgaaacagggcattaa

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