Cryptococcus neoformans var. neoformans JEC21: CNL04270
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Entry
CNL04270 CDS
T00243
Name
(RefSeq) DNA dependent ATPase, putative
KO
K15082
DNA repair protein RAD7
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cne03400
]
CNL04270
DNA repair and recombination proteins [BR:
cne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
CNL04270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf_Tbcl_Rhp7
LRR_4
LRR_14
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
3254899
NCBI-ProteinID:
XP_567979
UniProt:
Q5K8W4
LinkDB
All DBs
Position
12:complement(join(188012..188088,188149..189018,189067..189134,189187..189284,189336..189533,189585..189788,189843..190061,190115..190183))
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AA seq
600 aa
AA seq
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MSRRSRAGGAVRGPSSALTSFLAGLGVEPSHRINAWGDRSAVETPTSNGSNQHPDPANVV
SDENVEAGPSRVGLGTPSLDEEGDLPVGFKRERGTNGDEDYKAKRVRAASIDSDDLDADD
TPVVGHSARTPKSAPQSSTNVPAGPMRPIGEFMVCGECTKRFTVTAYTKEHPTNSQTYLC
VQCCYALGIDPFAKPKKAAPKKAVKKQNRAKIVHYEQRRGVNSLGDICIQLVGKYIENVE
QLGDIGSINMDKVCRIICKGRRLTPETAPLFYSVERDSLDMYDCTRLTPEAFFTLANLCP
NLQTLRLDLVGQMSTEVVSHWAKSLKQLKRIELHAPFLVRKEAWIELFQAAGERLEGFLV
TQSPRIDRETVHQLVKNCPNLTELRLAEIGRLDSEMLKELKPLKKLRLLDISSPADSLTD
DAIVDLLEAVGDSIEDLNLADNFDLTDAILPAIVKYCPRLQSLCLRNLTELTDEGVTAFF
GSLQAKGHQGLRCIDMEKGHELRDSALGALIAHSGETIEWLSLLGWKEVALEALNALVRC
KNLKYLDVGWCRAVNNFWVKDVLDGCHAIEQVRVWGCNELSDGVPRKKGVKVIGIETHSI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgtagcagagcaggtggggcagtccgtggcccatcttctgcccttacttcc
ttcttggcaggcctcggcgttgaaccgtcgcatcgtataaatgcttggggagatcgttcc
gccgttgaaactcctacttctaatgggtccaatcaacaccctgacccggcaaatgtagtc
tcagatgagaatgtggaggcgggtcctagcagagttggactgggcacaccgtcacttgac
gaagagggtgacttgcctgtcgggttcaaaagagagaggggaacaaatggtgatgaagat
tacaaggccaaacgtgttcgagccgcatctatcgattcagatgatctcgatgcagatgat
acccctgtggtaggtcacagcgctcgaacgccaaaatcagcccctcaatcttcaacaaat
gtgcccgccggccccatgagacctatcggggagtttatggtctgtggagagtgtaccaaa
cggtttacagtgacggcatacaccaaggaacatcctaccaattcccaaacatatctatgt
gtccagtgctgctatgcgttagggattgacccctttgctaagcccaaaaaggccgctcca
aagaaagcagttaaaaaacagaatagggccaagattgtccattacgaacaaagacgagga
gtaaattctttaggagacatttgcattcagcttgtaggcaaatacattgagaatgttgag
caactaggcgacattggcagtatcaacatggataaagtctgtagaattatatgcaagggc
cgccgattgacgcctgagaccgcacccttgttttattccgtcgaacgcgattcgttggac
atgtatgattgtactcgtcttactccagaagctttcttcacactggcaaatctttgccca
aatctgcaaacattgcgtcttgaccttgtcgggcaaatgtctacagaagtagttagtcac
tgggccaagagtctgaaacagctgaaacggatagaacttcatgctccctttcttgtgagg
aaggaagcctggattgagctcttccaagcagctggggaacgattggagggcttcctagtg
actcagtccccaaggattgacagggagacagtacaccagttggtcaagaattgcccgaac
ctgacagaactaagacttgcagagattggcagacttgacagtgagatgcttaaggaactc
aagcccctcaagaagctcaggcttcttgatatttcttcccctgctgattccttaacggat
gatgccatcgttgacctgcttgaagccgtaggcgattccatagaagaccttaatctggcc
gacaactttgatttgaccgacgccattctcccagctattgtcaaatattgccctcgactc
cagtcattatgcctccgcaacctcacagaacttactgacgagggcgttacggcgtttttc
ggatcgctccaagccaaaggtcaccagggcctgcgctgtattgatatggaaaagggtcat
gagcttagagactctgctttgggagctctgatcgctcattcgggcgagacgatagagtgg
ctgagcctcctcggttggaaggaggtggcactcgaggccctgaatgcgttggtcagatgc
aagaacctcaaatacctggatgttggatggtgtcgggcggttaataatttttgggtcaaa
gatgtgttggacggatgtcatgctatcgaacaagttagagtatggggttgcaatgaatta
tctgatggtgtgccgcgaaagaaaggggtcaaggtgatcgggatcgaaacgcattcaatc
tag
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