KEGG   Cryptococcus deneoformans JEC21: CNL05190
Entry
CNL05190          CDS       T00243                                 
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 3, putative
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
cne  Cryptococcus deneoformans JEC21
Brite
KEGG Orthology (KO) [BR:cne00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cne04121]
    CNL05190
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNL05190
Enzymes [BR:cne01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     CNL05190
Ubiquitin system [BR:cne04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    CNL05190
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    CNL05190
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-RING_2 zf-C3HC4_2 zf-C3HC4_3 zf-C3HC4 zf-RING_5 ResIII zf-RING_UBOX zf-rbx1 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_11 TRAF3_RING zf-ANAPC11 zf-RING_4
Other DBs
NCBI-GeneID: 3254749
NCBI-ProteinID: XP_568059
UniProt: Q5K8L9
LinkDB
Position
12:join(452166..452294,452354..452476,452523..452671,452719..452962,453018..453321,453372..453455,453513..453824,453874..453948,453998..454348,454402..454641,454693..455135,455190..455246,455300..455375,455437..455552)
AA seq 900 aa
MSHIDYFGGQPSTAQKRPRQTQPTSSSQEEDDDQQSRAIEHDEHFATFRSDVVGVQYYRG
LVGRGEYVLLRREPTNKWDSNAVQVVNAGGSQVGHIPRAVAANLATLMDRNQISVEGRMI
GQNLDGAKHFKLPLDVSIYLNHSMRESLEPALRWVSPGDRVNNQARRPVYTSQSQVRGAA
GSGVGLPQPADSTMKELLEGLSKDNADLKQVDKVMDALTSDVDVSKLPLHPAPPGTANGQ
LLTDLLPHQSQALQWMITRENPQLPKSPSEPAVQFWVKQKGVGSKPDYWLNVATKTPQSE
APQLGRGGIIADGMGLGKTLTTISLVLATKNDPVGDKVSKSTLIVCPLSVLSNWEKQIRD
HVAPSQLRFYTYHGAAKGLTAKKLGGYDIVLTTYQTVAGEDAAVPHTGDTPLAKKSRPST
TKSGPLATIKWKRVVADEGHQLKNPKAKMTIAFANLSAERRWICTGTPIVNSPNDLGSLL
TCLHICAPLSNPQYFRALLLRPLSRGDPTASKLLQAVVSQILLRRTKDSKGANGENVVEL
PDIEFFRVPVKLDNETRKVYEEVLEHSKRRFEETLRTGEGAANVLSMLTRMRQLCLSLEL
IPQSFLDEIRAPPTSQNGASATSIASLSTEEMEALVKKLRQIVEDETECGICMDEVEFAK
DPAITDCGHPFCLPCIERVITSQGLCPMDRHPIAHGSILRLPSDESLYLPSSQARSINSA
KIDELVKYLRIFPRDDKTLVFSQFTSFLDCVGVRLEQEGVKFVRFDGRMPGKQRTEVIKA
FQEPVKGDDDEEAPTVMLISLKSGAVGLNLTAASNVFLCDPWWQSAIEAQAIDRAHRMGQ
KKVVRVFQLIAEDTIESRVLDIQKRKDAMVAKAFEKSSKESQRTKKEARFEDIKELLGMK
NT seq 2703 nt   +upstreamnt  +downstreamnt
atgagccacatagactatttcggtggacaaccttcaacagcccaaaaacgccctcggcaa
acccagcccacctcctcgtcccaagaagaagatgatgaccagcagagcagagcaattgaa
catgacgagcactttgctacattccgttccgacgtagttggagtccagtactaccgcggt
cttgttggtagaggcgaatatgttttactccgcagagagcccaccaacaagtgggatagc
aatgctgtccaggtggtaaacgcaggaggcagccaagttggacatattccaagagcagtc
gctgccaaccttgcgaccttgatggatagaaaccagatttcggttgaaggccggatgata
ggtcaaaatctggatggtgccaagcacttcaaactgcctcttgatgtctccatctactta
aaccattctatgcgcgaatcccttgaacccgccttgcgatgggtgagcccaggagacaga
gtcaacaaccaagctcgtcgtcctgtctacacgtcacagtcccaagtccggggtgcagca
gggagtggtgtcgggttaccccaacctgctgatagcaccatgaaagagctgctcgagggt
ctgagcaaggataatgctgatttgaagcaggtcgacaaggtcatggacgcccttaccagc
gacgtcgacgtctccaaactccctctacaccctgcgcctcctggtactgcaaatggccaa
cttctcaccgacctccttccgcaccagtcacaggcccttcaatggatgatcactcgtgag
aacccccagctgcccaaatccccttcagaacccgctgtccagttctgggtcaagcaaaaa
ggtgttggaagtaagcccgattactggctgaacgtagctaccaagacaccgcaaagtgag
gctccgcaattgggtaggggtggtatcattgctgatggcatgggtttgggtaaaactctg
actaccatatctttggtgctcgctacaaaaaacgatcccgtcggggacaaagttagcaag
tccactttgatcgtctgccctttgtcagtcttaagtaactgggagaaacaaattagagac
catgttgccccctctcaattgaggttttacacctatcacggcgctgcaaaaggtctcacc
gccaagaaactgggcgggtacgatattgtcttgaccacttatcagactgtcgccggggaa
gatgctgctgtcccacataccggcgatactcctctggcgaagaaatcgaggccaagcact
acaaaatcaggacctttggctacgatcaaatggaagagggtggtggccgatgaaggtcat
cagctgaagaatcccaaggctaagatgacgattgcatttgccaatctcagcgctgagagg
cgttggatatgcaccggtacacctatcgtcaactctcctaatgacctcggatcccttctt
acttgtctacacatctgtgctcccctgtccaacccccaatactttcgtgctctccttctt
cgacccctctctcgaggcgatcccaccgccagcaagctattacaagccgtcgtttctcag
atcctcctgcgccgaaccaaagattcaaaaggtgcgaatggggaaaatgtggttgagctt
ccggacattgagttctttagggtcccagtcaagttggataatgagactaggaaggtgtat
gaggaggttttggaacatagtaagaggaggtttgaggagacattgagaactggtgaagga
gcggcgaatgtgctttctatgcttactcgaatgcgacaactctgcctttcactcgaactc
atcccacagtctttcttggatgaaatccgcgcgcctcctacatctcagaatggcgcctcc
gcaacttccattgcctcgctctcaaccgaagagatggaagctttggttaaaaagttgagg
cagattgttgaagatgagactgagtgtggtatctgcatggacgaagtcgagtttgccaag
gacccggctatcactgactgtggtcaccctttctgtttgccttgtatcgaacgggtgatc
accagtcaaggtctctgccccatggaccgccatcccatcgcccacggatccattcttcgc
ctcccctccgatgaaagtttatacctcccttcctcacaagcacgttccatcaactctgca
aagattgacgaactcgttaaatacctccgcatctttccacgcgacgacaaaactctcgtc
ttctcccagtttacatctttcttggactgcgtcggtgtgcgactagaacaagagggggtc
aagtttgtgaggtttgatggacggatgccggggaaacagaggacagaagtgatcaaagct
ttccaggagcctgttaaaggggatgacgatgaagaggcgcctacggtgatgttgatctcg
ttgaaaagtggtgccgttggactcaacttgacagcggcgtccaatgttttcttgtgtgac
ccatggtggcagagtgctattgaagcgcaggctattgatcgagcccataggatgggtcaa
aagaaagttgtgagagtcttccagcttatcgccgaagacacaattgaatcgagggtcttg
gatatacagaaaagaaaagatgcgatggtagctaaagctttcgaaaagtcgagcaaggag
agtcaaagaaccaagaaggaagcgaggtttgaggatatcaaggaacttttgggtatgaag
tga

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