Cryptococcus neoformans var. neoformans JEC21: CNM00860
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Entry
CNM00860 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14298
mRNA export factor
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNM00860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNM00860
03036 Chromosome and associated proteins [BR:
cne03036
]
CNM00860
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CNM00860
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CNM00860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WDR55
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_Nup120_160
RMC1_N
Beta-prop_IFT122_1st
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
3255267
NCBI-ProteinID:
XP_024513985
UniProt:
Q5K7Y4
LinkDB
All DBs
Position
13:join(251656..251781,251839..251931,251986..252162,252213..252365,252420..252520,252575..252595,252645..252841,252903..253011,253065..253188)
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AA seq
366 aa
AA seq
DB search
MLSTFRTGVKDIELANPPTDSISRIEFSPTADILAVASWDNNVRLYDVNSQGQNQGKAMY
SHQAPVLDLTWSADGQYVFSSGCDNAAQMYNVQTQQAQQVAQHDAPIKCVEFAEVPGSGQ
VLITAGWDKKLKYWDLRSPNPIATIDLSDRAYSMSVAQQLLVCATGDRQLHVINLSSPTT
IFKSIESPLKWQTRVVSCFPTGDAFAVGSIEGRVAIQYPGEDDKRNFSFKCHRYDIPTGS
MPRTPAVSGSQNVFAINSLTFHKVQGTFCSGGSDGSLTFWDGISRTKLKTFSCKDLNNGD
TDVRPPRFGTPIVSTSFNRTQEIIAYAMSYDWSKGHSGVPPAGQNINKVMLHPVKPEEVN
KKPKRN
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgctctctaccttccgaaccggcgtcaaggatattgaactcgccaaccctcctacagac
tcaatctctagaatcgaattctctcccaccgccgacatacttgctgttgcgagttgggac
aacaatgtgcggttatacgacgtaaactcgcaagggcagaaccaagggaaggcgatgtac
tctcatcaggctcctgtgcttgatttaacttggtcggcagacggccaatatgtcttctcc
tccggatgcgacaacgctgctcaaatgtacaacgtccaaacacagcaagcacaacaagta
gctcaacatgatgcacccataaagtgtgttgaatttgccgaagtgccgggaagtggacag
gttttgattacagcgggttgggataagaaactcaagtactgggacttgagatcacccaac
cctattgcaactatcgacctctctgatagggcctattcgatgagcgttgctcaacaactg
ttggtctgtgctaccggtgaccgtcaactgcatgtcatcaatctttcaagccctaccacc
atcttcaagagtatcgagtcaccgttgaaatggcaaacacgagttgtcagctgttttcct
actggagacgcattcgctgttggaagtattgagggacgagtagctatccaataccctgga
gaggatgataagcgaaatttctctttcaaatgtcatcgatacgacatccctactggtagc
atgccgcgaactcccgccgtcagcggctcccagaatgttttcgctatcaactctctcact
ttccacaaggtgcagggaactttctgctctggtggcagcgacggtagtttgacattctgg
gacggtatctctcgaacaaagcttaagactttctcctgcaaggatttgaacaacggagac
acagatgtacgaccaccaagatttggtactcccatcgtgtctacttcctttaaccgaacc
caagaaatcatcgcgtatgccatgtcatatgattggtccaagggccacagcggtgtccca
cctgcgggacaaaacattaacaaagttatgttgcaccctgtcaagcctgaagaagtcaac
aagaagcccaagaggaattaa
DBGET
integrated database retrieval system
