KEGG   Cryptococcus neoformans var. neoformans JEC21: CNM00880
Entry
CNM00880          CDS       T00243                                 
Name
(RefSeq) DNA polymerase processivity factor, putative
  KO
K04802  proliferating cell nuclear antigen
Organism
cne  Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03030  DNA replication
cne03410  Base excision repair
cne03420  Nucleotide excision repair
cne03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cne00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CNM00880
   03410 Base excision repair
    CNM00880
   03420 Nucleotide excision repair
    CNM00880
   03430 Mismatch repair
    CNM00880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cne03032]
    CNM00880
   03400 DNA repair and recombination proteins [BR:cne03400]
    CNM00880
DNA replication proteins [BR:cne03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    CNM00880
DNA repair and recombination proteins [BR:cne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     CNM00880
   MMR (mismatch excision repair)
    Other MMR factors
     CNM00880
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    CNM00880
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1 Rad9 Trypan_PARP
Other DBs
NCBI-GeneID: 3255116
NCBI-ProteinID: XP_024513947
LinkDB
Position
13:complement(join(256802..256816,256863..257081,257129..257208,257258..257656,257711..257816,257872..257979,258054..258106,258233..258284))
AA seq 343 aa
MLEARVKQAVVLKKLLDAIKELVSDGNLDCTEEGISLQAMDNSHIALVALKLEASEFDEY
RCDRNMPLGVNLASLTKILKCAKDTDVVTLKASDDADALNLIFESPKEDRVGEYEMKLMD
IDQEHLGIPDTQYDATVSMSSAEFARICRDLAVLGESVKIECSKEGVTFSADGEVGKGSV
LLRQNAGQDRSRVKDENEMDEDGKLDIKPKTKREARRDPDEDDEDGQRSDVDVKPDIEGE
DELQDEEEQEGEEQPKKRKAAGKKDKANKRAKKEDVEDPGVSIILERQVSLTFSLKYLTN
FAKSAPLAREVTLHMSNDVPLLVQFEFEQGTLQFFLAPKIADE
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcttgaagcacgcgtaaaacaagctgtagtcctcaagaaactcttggatgctatcaag
gaacttgtctctgatggtaatctcgattgtactgaggaaggtatctctcttcaagccatg
gacaattcccatatcgctttggtcgccctaaagcttgaagcttccgaatttgatgaatac
agatgcgaccgaaacatgccactcggtgtcaatcttgcctctttgaccaagattctcaaa
tgtgctaaagatactgatgttgtcacacttaaggcttctgacgatgccgatgcactcaac
cttatatttgaatctcctaaggaggatcgtgttggcgagtacgaaatgaagctaatggac
atcgatcaagaacaccttggcatccccgacactcaatacgatgccaccgtttccatgtcc
tctgctgaatttgctcgcatctgccgcgatctcgctgtcctcggcgagtcagtcaaaatc
gaatgctccaaggagggtgtcaccttctccgcagacggtgaagttgggaagggttctgtt
cttctccgtcaaaatgctggtcaggacagaagcagagtcaaggatgagaatgagatggat
gaggatggaaagttggatatcaagcccaaaacaaaacgggaagccagacgggaccctgac
gaggatgacgaggacggccagaggtccgacgttgatgtgaagccggatattgagggcgag
gacgaacttcaggacgaagaagagcaagaaggagaggagcagcccaagaagcgaaaggcg
gctggcaagaaggacaaggccaataagcgagccaagaaggaggacgttgaagatcctgga
gtatctatcatccttgaacgacaagtttctctcacgttttctttaaaatacctcaccaac
tttgccaaatccgctcctcttgccagagaagtcactttgcatatgagtaacgatgtgcct
cttctggtgcagtttgagtttgaacagggaacattgcaattctttttggcgccgaagatt
gcggacgaataa

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