Cryptococcus neoformans var. neoformans JEC21: CNM01000
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Entry
CNM01000 CDS
T00243
Name
(RefSeq) ER to Golgi transport-related protein, putative
KO
K14007
protein transport protein SEC24
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CNM01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cne04131
]
CNM01000
Membrane trafficking [BR:
cne04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
CNM01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
3255235
NCBI-ProteinID:
XP_568412
UniProt:
Q5K7X0
LinkDB
All DBs
Position
13:complement(join(299829..299902,299967..300482,300533..300605,300657..301436,301495..301701,301750..302252,302303..302641,302694..303213))
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AA seq
1003 aa
AA seq
DB search
MAPRTRYAIDPSLTGHPQVPAPQQQQWPQPEYIQAAQPGYQPERYQQQAHLDPNSMPQLH
NVPEKDLRPSGPYAPTQSSYHAIHPSQQLQPKQQQQEMQSPRATPPPNHIPPPPHSSGPT
MSGMRVRIDPSQVPNPIEAQELDQNLYEDEDFLSCQTRGLIPLVGTDYRGVDQGNSLPRH
LRATLPCVPSNGQLLDTTALPFGILVQPFAPLRYDEAPVPCVSSWVSGQSAFDPPAFKGE
TWGAEGEGDEQGPPRCDKCRGYINPWIRFVDGGRKWTCNLCGVLNEVPPQYFCHLAPNGQ
RLDHAERPELQFGTVDFPVPPSYWALQPPSGSLLDSIDSDALASTAHDLLGGLQASLGQS
QPHIPTGKEQREKEKEKEKERKKFRKPIALSRVFVLDVSAHAGENGVARQVCERIRKAIY
GSKESGNVEEELLGEGQRIGFVSVGETVSFWNLSSHLHAPSQAVVSDLDDMFIPFTAGFL
VDPQESRAQIEHLLELLPNLAEQGREGGRVAAGSAIVGALAGLKHTGGQINLFLTSLTTH
GLGTLTTRENPDYYNTDKERTLFTPSQWYLTTADQLAEAGVGVNLFLFPSAYTDIASLGA
LAAGTGGETFFHPRFDVVRDREKIHSELLQVLTRETAYNATVRVRCSNGLRVSDHLGNFY
QRSLTDLEYATIDSAKSFTAVLKHEHRLDDRQPAFIQVAILYTSKEGERRVRCLNMSFVV
TSMIGNVFKFADQEACVAVLLKAGLSQVTQRSLRDIRKSLTDRANRVLLMYRKHCAPAVQ
HGQLILPEGFKLLPLYALCMTKSKPIKGGSVSSDVRMHYTRHVKALPPTRVLMLLYPRLL
AIHDLAPAAGFADSNTGRLVLPRFMRNSHSWMVAEGAYLMINGEIAMLWLGQAVSPQIIN
DLYGVDNLEDLDVRITRLPNLPTLLSTQIRNILTHLSSPHLVDQELPVIIVRQNMDGAEV
EFANQLVEDSNNDALSYTDYLMTAHREITNDLSGGKGDSWRPW
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcacaagatacgccatagatccttcgttgacgggccacccacaggtccca
gcgcctcagcagcaacaatggccgcaaccagagtacattcaagcagctcagccgggctat
cagcctgaaaggtaccagcagcaggcgcacttggacccaaattcgatgcctcaattgcat
aatgtccccgaaaaagatcttcgaccaagtggaccatatgctcctacgcagtccagttat
cacgcgatacatccttcacaacagttacagccgaaacagcagcaacaagaaatgcagtcg
ccgagggctactccacctccaaaccatattccaccgccacctcattcttccggacccact
atgagcgggatgagggttagaatagatccgagtcaagtgccaaaccctattgaagctcag
gagctggatcaaaacttgtacgaggacgaggattttttaagttgtcaaacccgtggtctg
attccattggtagggactgattacaggggcgtggaccaaggcaattcattgcctcgtcat
cttcgagctacgcttccatgcgttccgtcaaatggtcagcttctcgacactaccgcgctt
cctttcggtatcctggttcaaccttttgcaccgttacggtacgacgaagctcctgttcca
tgcgtttccagttgggtttcagggcaaagcgctttcgatcccccagcatttaagggtgaa
acatggggagcggagggggaaggagatgaacaaggcccgccgaggtgtgacaaatgcaga
gggtacatcaacccatggattagatttgtcgatggtggaagaaagtggacgtgtaactta
tgtggagttctcaatgaggtgccgccgcagtacttttgccatctcgctcccaatggccaa
cgtcttgatcatgctgaaaggccggaacttcaatttggcactgttgactttcctgtacct
ccttcgtactgggctctgcaacctccttctgggtctttactcgactccattgactcggac
gcgctcgcttcgacagcgcacgatcttttgggtggcctgcaagcgtctcttggacaaagt
caaccccatattcctactggaaaagaacagagagaaaaagaaaaggaaaaggaaaaggag
agaaagaaattcagaaaacctatcgcgttgagtcgtgtttttgtccttgatgtcagcgca
catgcgggagaaaatggagttgccagacaagtttgtgagaggatcagaaaggctatctac
ggaagcaaagaaagcgggaatgtggaagaggagctgctgggagaaggacaacgaattgga
ttcgtgtctgtgggagaaactgtatctttctggaacctttcctctcatctgcatgcgcca
tcacaggcagtcgtttcagatctcgatgacatgtttataccttttaccgctggcttcctc
gttgatccgcaagaatcccgcgcgcaaattgaacatctattggaacttttgccgaacttg
gcggagcaaggaagagagggtgggagggtcgccgcgggctctgctattgttggagctttg
gctggtcttaagcacaccggtggccagatcaatctcttcctcacgtctttgaccacacat
ggtcttggtacccttacgacacgagagaatcccgattattacaacaccgacaaagaacgg
acactcttcaccccttcacaatggtatctcaccacggccgaccaacttgccgaagcaggt
gtcggcgttaatctcttcttgttccccagcgcttataccgatattgccagtcttggtgcc
ctcgctgctggaacgggaggtgagacatttttccaccccaggtttgatgtagtcagagac
agggaaaagattcatagcgaacttcttcaggtgctcactcgggagacggcttacaatgct
actgtgcgagtgagatgttctaacggtcttcgcgtctctgaccacctgggtaatttctat
caacgttcgctcaccgacttggaatacgctacgattgactctgccaaatcgttcaccgct
gtgctcaaacacgaacatcgactagacgaccggcaacctgcgttcatccaagttgccatc
ctttacactagtaaagaaggagaacgaagggttcgatgtttgaatatgagctttgtggtt
acaagcatgattggcaatgtgttcaaatttgccgaccaggaagcgtgtgtagctgtcctt
ctcaaagctgggttatcacaggttacgcagagaagcttgagagatatccggaaatctttg
acggatagggcgaacagagtgttactcatgtacagaaagcactgcgcacctgctgtccag
cacggccagctcatattaccggaaggtttcaagctcctgcccctatacgcactttgtatg
accaagtcgaaacccatcaaaggtggaagcgtctcctctgatgttcgaatgcattacact
cgccacgtcaaagctctcccaccaacccgtgtcctcatgctcctctatccccgattgttg
gctatccacgaccttgcacccgctgccggctttgccgactctaacactgggcgtctagta
ttacctcgctttatgcgcaacagccatagttggatggtagcggaaggcgcttatctaatg
attaacggagaaattgcgatgctctggctcggccaagccgtcagtccccagatcatcaat
gatctttacggtgtagacaatcttgaggacctcgacgtccgcataacccgattacccaac
ttgccgacccttctgtctactcaaatccggaacatcctcacacatctttcatcccctcac
cttgtcgatcaggagttgccggtcataattgttaggcaaaatatggatggggccgaagtg
gagtttgccaatcagctagttgaggatagcaacaatgatgctctaagttacactgactat
ttaatgacggcgcacagggagatcacaaacgatctcagcggcggaaagggcgacagctgg
agaccgtggtaa
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integrated database retrieval system
