Cryptococcus neoformans var. neoformans JEC21: CNM01100
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Entry
CNM01100 CDS
T00243
Name
(RefSeq) RNA binding protein, putative
KO
K27407
RNA-binding protein VTS1
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNM01100
04131 Membrane trafficking [BR:
cne04131
]
CNM01100
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
CNM01100
Membrane trafficking [BR:
cne04131
]
SNARE
SNARE associated proteins
Others
CNM01100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
Motif
Other DBs
NCBI-GeneID:
3255094
NCBI-ProteinID:
XP_568300
UniProt:
Q5K7W0
LinkDB
All DBs
Position
13:complement(join(326963..327058,327116..327220,327292..328697,328744..328860,328909..329251))
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AA seq
688 aa
AA seq
DB search
MASHTLRPHRSPSPSPEPPVNLANPAKLTRQSLGPPTSGNSKGFGSLGLGPGLASPSSSS
QPRHVSSSVAMGMGNRDSLSPRPSGVGSGRAVSATTGPRPSSEFIPTREAKTPEAEQIDQ
WFKHLANWEATLEEMAAASTDQNFTEELGAIEQWFRVLSEAERTAALYSLLQYSTPVQIR
FFISVLHHMSQSDPMSALLSPSLSGNNSFQTQVESKLSNMNLKSPSAGGGAGFTGSSGNG
HYLAPDDAATKAAKARQNRISAPGTLQPHDRWQGQLDQVIERGTSPGLESNISGRSRSKS
PTPEPRPKSTDFSGKPRESLHRDSTAFPRSPRVSAGSPGIGLGIGHESPMASPFGNNASW
ASMVNTPLVQNFNDGKLTAPASVADLSQALNMATLQLNNPGYLPLDDARKYRRPTGGYSS
GQTSRNVSGQYNDDGEIVNPHTTQPGTPSGLLPNQFGTAGRSPLVDQFGLGGLGIGADPA
TLANLGLNYNLAGLGGVNPGLNGLTAAQAQAAQMLAMQQQLQNSQYSPFNVSASSLQPGL
NPSRRGASRDQSSHLNQHHNQHQQQHQLGRRSPNPMKSHSPAPGQQTGGGGAGGGAGVAG
PEDVDVRILEDVPNWLRVLRLHKYTPNFEKSNWNDMVLMTDQDLQDNGISAQGARTKFLK
VFYNVRTKMDIAHPPGQEEYAPGPKESK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccacactcttcgacctcaccgttccccctctccctcccctgaacctcctgtt
aaccttgccaacccggctaaactcacccgccaatctcttggtcctcccacatccggtaac
tccaaaggttttggatccctcggcttgggccctggactcgcgtctcctagctcctctagc
caacccagacacgtgagctcgtccgtcgctatgggtatgggaaaccgggacagtttgagc
cccaggccaagcggcgttggcagcggaagggccgtttctgccactacgggtcctaggccg
agcagtgaattcattcctacccgcgaggccaagactcccgaagcggagcaaattgatcaa
tggtttaaacaccttgctaactgggaagcgacccttgaagaaatggcggctgcgagcaca
gaccaaaactttaccgaagagcttggcgcgattgagcaatggttccgcgttctctctgag
gctgagcgtactgccgctctgtactctcttctccaatattccactccggtccagatccgt
ttcttcatttcggtgctccaccacatgtcccaatctgaccccatgtctgctctcctctcc
cccagcctttccggtaacaactctttccagactcaggtcgagtccaagctgtccaatatg
aacctcaagtccccctccgcaggcggcggagccggtttcactggctcttctggtaatggg
cactatctcgctccagatgatgctgcaacaaaggccgcgaaagcaaggcagaaccgtatc
tccgctcctggtacactccagccgcacgacaggtggcaaggtcagcttgatcaggtgatc
gagcgaggtacatctccgggtttggaaagtaacatttctggccgtagccgaagcaagtcg
cccactcctgaaccccgacccaagtctactgacttttcgggtaaacctcgagaatccctc
caccgtgacagcactgccttccctcgctctcctcgagtttctgctggtagccccggtatt
ggcttgggtatcggacatgagtcccctatggccagtccgtttgggaataacgccagctgg
gcgagcatggtcaacaccccccttgtacagaatttcaatgatggcaagctcaccgctcct
gctagcgtcgccgacctctctcaggctctcaacatggcgaccctccagctcaacaaccct
ggttaccttcctcttgatgatgctcgcaagtatcgacggcccactggcggttactcttcc
ggccagacttctcgtaacgtctcaggccaatacaacgacgacggtgagattgtcaatccg
catactacccagcctggtacaccctctggccttcttcctaaccaatttggaacagcggga
cgctcgcctcttgtggatcagtttggtttgggcggcttgggtatcggtgccgatcccgca
acgttggctaatctcggactgaactacaaccttgcaggattgggaggtgtgaaccctggc
ttaaacggtttgactgccgcacaagcccaagcggcgcagatgctcgctatgcaacaacaa
ctccaaaactcccaatactcgccgttcaacgtctccgcgtctagccttcagccggggttg
aacccgtctcgacgtggcgccagtcgagaccagtcttcgcatcttaaccaacaccacaac
caacatcaacaacagcaccagcttggaaggcgaagtcccaaccctatgaagtcccactcc
cccgcacctggtcaacagactggtggtggaggtgctggtggtggcgctggtgtggcagga
cccgaagatgtggatgtgaggattttggaggatgtgcccaactggctgagagttctcaga
ttgcataaatatacgcccaactttgaaaagtccaactggaacgacatggtgttgatgaca
gatcaggatctgcaggacaatggtatctcggcgcaaggtgcgaggaccaagttcctcaag
gtattctacaacgtgcgaaccaagatggacattgcccaccctccagggcaggaagagtac
gctcccggacccaaagaatccaagtaa
DBGET
integrated database retrieval system
