Cryptococcus deneoformans JEC21: CNM01300
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Entry
CNM01300 CDS
T00243
Name
(RefSeq) translation elongation factor EF1-alpha, putative
KO
K03231
elongation factor 1-alpha
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNM01300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNM01300
03016 Transfer RNA biogenesis [BR:
cne03016
]
CNM01300
03012 Translation factors [BR:
cne03012
]
CNM01300
04131 Membrane trafficking [BR:
cne04131
]
CNM01300
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cne04147
]
CNM01300
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CNM01300
Transfer RNA biogenesis [BR:
cne03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CNM01300
Translation factors [BR:
cne03012
]
Eukaryotic type
Elongation factors
CNM01300
Membrane trafficking [BR:
cne04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
CNM01300
Exosome [BR:
cne04147
]
Exosomal proteins
Proteins found in most exosomes
CNM01300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
FlpD
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
3255123
NCBI-ProteinID:
XP_568462
UniProt:
P0CN30
LinkDB
All DBs
Position
13:complement(join(388345..388631,388683..388958,389025..389227,389280..389739,389792..389922,389975..389997))
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AA seq
459 aa
AA seq
DB search
MGKDKLHVNVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQELGKSSFKYAWVL
DKLKAERERGITIDIALWKFETPRYQVTVIDAPGHRDFIKNMITGTSQADCAILIIATGI
GEFEAGISKDGQTREHALLAFTLGVRQLIVACNKMDTCKWSEDRFNEIVKETNGFIKKVG
YNPKAVPFVPISGWHGDNMLEETTNMPWYKGWTKETKSGVSKGKTLLEAIDAIEPPTRPT
DKPLRLPLQDVYKIGGIGTVPVGRVETGVIKAGMVVKFAPTNVTTEVKSVEMHHEQIPEG
LPGDNVGFNVKNVSIKDIRRGNVCGDSKNDPPMEAASFNAQVIVLNHPGQIGAGYTPVLD
CHTAHIACKFAELIEKIDRRTGKVMEAAPKFVKSGDAAIVKLVAQKPLCVETYADYPPLG
RFAVRDMRQTVAVGVIKSVDKTEKGGKVTKAAEKAAKKK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggacaagctgcacgtcaacgtcgttgttatcggtcacgtcgactccggtaag
tcgaccaccaccggtcacttgatctacaagtgcggtggtatcgacaagcgaaccattgag
aagttcgagaaggaggctcaagagctcggaaagtcttctttcaagtacgcttgggttctt
gacaagcttaaggccgagcgagagcgaggtatcaccatcgacattgctctttggaagttc
gagacccccaggtaccaggtcaccgtcattgacgcccccggtcaccgagacttcatcaag
aacatgatcaccggtacctcccaggctgactgtgccatcctcatcattgccaccggtatc
ggtgagttcgaggccggtatctccaaggacggtcagacccgagagcacgccctcctcgcc
ttcaccctcggtgtcaggcagctcattgttgcttgcaacaagatggacacctgcaagtgg
tccgaggaccgattcaacgaaatcgtcaaggagaccaacggtttcatcaagaaggttggt
tacaaccccaaggctgtccccttcgtccccatctctggttggcacggtgacaacatgttg
gaggagaccaccaacatgccctggtacaagggatggaccaaggagaccaagtctggtgtt
tccaagggtaagaccctcctcgaggccatcgacgccatcgagccccctacccgacccacc
gacaagcccctccgtctccctctccaggacgtctacaagatcggtggtatcggcacagtc
cctgtcggccgagtcgagaccggtgtcatcaaggccggtatggtcgtcaagttcgccccc
accaacgtcaccactgaagtcaagtccgttgagatgcaccacgagcagatccccgagggt
cttcccggagacaacgttggtttcaacgtcaagaacgtttccatcaaggacatccgacga
ggtaacgtctgtggtgactccaagaacgacccccctatggaggctgcttctttcaacgcc
caggttatcgtccttaaccaccctggtcagatcggtgccggttacacccccgttctcgac
tgtcacactgcccacattgcctgcaagtttgctgagttgatcgagaagattgaccgacga
accggtaaggtcatggaggccgcccccaagttcgtcaagtctggtgacgccgccattgtc
aagcttgttgcccagaagcccctctgtgttgagacctacgccgactacccccctcttggt
cgattcgccgtccgagacatgcgacagaccgttgccgttggtgttatcaagagcgtggac
aagaccgagaagggtggcaaggtcaccaaggctgctgagaaggctgccaagaagaagtaa
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