Cryptococcus neoformans var. neoformans JEC21: CNM02050
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Entry
CNM02050 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cne03009
]
CNM02050
Enzymes [BR:
cne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CNM02050
Ribosome biogenesis [BR:
cne03009
]
Eukaryotic type
Pre-60S particles
Helicases
CNM02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
3255082
NCBI-ProteinID:
XP_568502
UniProt:
P0CR10
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All DBs
Position
13:join(634140..634180,634233..634455,634504..634670,634721..634994,635042..636220)
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AA seq
627 aa
AA seq
DB search
MLSKSNQPSDALLDADFSFSQPPFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKD
VLARARTGSGKTAAYIVPAVQKILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTK
NVTKYCDGLVQCVDVAAGGASIQRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAI
DEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQGCLMSATLSDDVEGIKGLVLRNPAILTL
SEPASASSLLSQHYTHTSERDKFLLIYVLLKLKLIRGKSIIFVNDVERGYRVKLFLEQFG
VKCCVVNSELPLASRYHVVEEFNRGVYDVVVATDEGAGADAEEEEDVKQEESESEGEEDE
DDDKEAEDKEKEAKEEAKPAPGPSKRRATSPPSKPNKRARRADPTSSLARGIDFTSASSV
INFDLPLTSTSYMHRVGRTARAGQSGLALSFVVPRENWGKDKAVSIKSAEKDEKVFERIK
ERVKKESDSEIKEWDWKGRKGEIEGFRYRMEDALKAVTGKRVAEARREEVRRELLNSEKL
KSHFAANPLDLSYLRHDAPLHPARQQTHLKHVPNYLMPKIAALPTGGDVTDHAGVGFSRR
GRGGHRGRGGRGSKSGRGKKVDPLKFK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgctttccaagagcaaccagccttccgacgcgctccttgacgccgacttctccttttcc
caaccccctttttcgacactcattgactctcgagtcctcgtggcccttgccgaccaaaaa
tttgcgcatccgactttagtacaggctaaggccatccctcttttgctcgaaggaaaagat
gttcttgcccgagctaggacaggaagcggtaagactgctgcttatatagtcccagcagta
cagaaaatcttggaggccaaggctgatctttcccctgcctctgcggagtatcaagctact
cgagcgatcattcttgtgcccaccaaggaattggccttgcaagtctcttctttcaccaag
aacgttactaagtactgcgatggtcttgtgcaatgcgtagatgttgctgcaggtggggct
agtatccaacgagtgcttctcaatgacaagcccgacatcgtcatctccactcctaccaaa
cttctgtcccttttgcagtctaaatccctttctctctcgcaactttcgttccttgctatc
gatgaggcggatcttttgctttcgtacggtttcaaagacgatcttactaggattatggac
cctacctctggatggatccctaagcttggtgtgcaaggctgcctcatgagtgctactttg
agtgacgacgtcgaaggcatcaagggtcttgtccttcgtaaccccgccattctcaccctt
tctgaacccgcctccgcctcgtctctcctcagtcaacactacacccacacctccgaacga
gacaagtttctccttatttacgtccttcttaagctcaaacttattcgcggtaaatcaatt
atcttcgtcaacgacgtcgaacgtggttatcgtgtcaaactcttcctcgaacaattcggt
gtcaagtgttgtgttgtcaacagtgaattgcccttggcgagtagatatcacgtggtcgag
gagttcaacaggggtgtgtatgatgtcgttgtggcaactgatgagggtgctggagccgac
gctgaggaagaggaagatgtcaagcaggaagaaagcgaatcagagggggaggaagatgaa
gatgacgacaaggaagcggaggataaagagaaggaggccaaggaagaagcaaaacccgcc
cctggtccttccaaacgccgggcaacctctcctccttccaagcccaacaaacgagcccgg
cgcgcagaccctacctcttcgctcgctcgtggcatcgactttacctccgcatcttccgtc
atcaactttgaccttcccctcacctctacctcctacatgcaccgagtcggtcgtactgca
cgagctggtcaatcaggcctcgccctttcgttcgtcgtccctagagaaaattggggtaaa
gacaaggctgtatcaatcaagtcagcagagaaggatgagaaggtgtttgagaggatcaag
gagagggtgaaaaaggaaagcgacagtgagatcaaggaatgggattggaaaggcaggaag
ggcgagattgaaggattcagatatcgaatggaggatgcgttgaaagctgtcactggcaag
agggtcgccgaagcgagaagagaagaagtcaggcgagagttgttgaacagcgaaaaactc
aaatctcactttgctgccaatcctctcgatttgtcttacctccgacatgatgctcctctt
catcccgcccgacaacaaacccatctcaaacatgtccccaactatcttatgccgaagatt
gcggccctcccaacaggtggggatgtaactgatcatgcaggcgttggattctctagacga
ggaaggggaggtcatagagggcgaggaggcaggggatcaaagagtggtaggggcaagaag
gttgatcccttgaaattcaagtag
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