Cryptococcus deneoformans JEC21: CNN01020
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Entry
CNN01020 CDS
T00243
Name
(RefSeq) vacuolar membrane protein, putative
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
cne
Cryptococcus deneoformans JEC21
Pathway
cne04138
Autophagy - yeast
cne04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
CNN01020
04148 Efferocytosis
CNN01020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cne04131
]
CNN01020
Membrane trafficking [BR:
cne04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
CNN01020
Hops complex
CNN01020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3H2C3
Clathrin
zf_RING_Vps8_fungal
zf-C3HC4_2
TPR_Vps41
zf-RING_5
zf-RING_2
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
3255360
NCBI-ProteinID:
XP_568542
UniProt:
Q5K757
LinkDB
All DBs
Position
14:join(317219..317338,317390..317713,317766..318201,318249..318514,318565..318798,318848..319234,319282..320340,320398..320573,320633..320846)
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AA seq
1071 aa
AA seq
DB search
MTLSPSHLGQTAPQWRQFTFFDAENVKDEQDMAQSPRAIRQLTPPVVITTTAPKSPLSPS
LIVSSSRNISILDKHFSIERSFTAWEQNGRATFLLEAAGLLVAIGEEEGSLWPLLKVWDL
TKDDKKSSERRPVLLRSVRIQHGQRPHPVSSVALTSNLSHLAIGLGDGTVLLYRHFLQSL
TTSLSLTSLPKARVVHESHEPVTGLGFREYPPTDKSTPSRSSSSHGFSLFIVTTNRVLSA
PVNGKGEARTIDDVGCALGCAAMDSQRKEMVVARDEAIYLYSPDGRGACLAYEGPKSSIA
VYNHNLIITSPPYYPSAASASATVRHYAKSTPNGELGSPDMAKITIFDLDNKVIGYSGTY
SEGVRDVFCQWGGIYVYGANGKLSRLDEQSTQAKLETLYRRNLYTLAITMARSQGLDEAG
IADIHRRYGDYLYSKGDFDGAMGQFVKTLGSLQPSYVIRKFLDAQRIHNLTTYLQELHSR
GLANPDHTTLLLNCYTKTSDRARLDQFIRTEARRSSSPAPGTGAGGREGELPFDLDTAIR
VCRQAGFYEHAAYLAKKFDKHEDYLRIQIEDAGKVDEALRYLRGLGPKACEVNMVRYGRT
LLQHEPEATTELLIDLCSGNLGKKKAVHEVDGKTDGTTAGSGANGSGPAMLSYLGYNKVT
GFLSGDTPSGATLNEDEKPTDAHDGTDAARVGEDEKEDMTPSYVPASPRQYFAHFVDHRE
LFIHFLESVALNLWNQKVDPSISNSSTISAPKRDMDAPPPTDPTVIDQTAVWNTLLELYL
SSSAEQSKRKALALINSDSTPYDPMHALVLCSSVGFREGMVRLWEGMGMYEDVLRYYMDE
GQEAEDAQGITPSSKVFTHLEMYGPSHPHLYPLVLRYLTSSPAILTRHKGELSKILAKID
EYQIMPPLGVVQLLSRNGVVDVGSVKEWLRGKVEENEEEIESDKHLYDSYRSETAAKRKA
ILDRSSVSQPEVFQVTKCAACGGQLDLPSVHFMCKHSYHQRCLPDSDPECPICARQHSVI
RELRRNQLRLADRHDLFLEEVHQAEDGFNVVADAFGRGLFGREGVDEKIEA
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgacactctcgccttcacacttaggccaaacagctcctcaatggcgacagttcactttc
ttcgatgcggaaaatgtcaaggatgaacaggacatggcccagtcgcctcgagctatccga
caactgactccgccagtcgtaattaccaccacagctcctaaatctcctctgtcaccctca
ctgatagtctcttcatctcgaaatatcagtatcctcgacaagcatttctccatcgagcga
tcgtttactgcctgggaacaaaatggtcgcgcgacattccttctcgaggcagccgggctg
cttgtagctataggagaggaagaagggagcctttggcccctgctgaaggtgtgggatctg
acgaaggacgacaagaagagttcagagagaaggccagtgctgctcagaagcgtacggata
caacatggacaaaggcctcatcctgtatcttcggtagctcttacgtcgaatctatcgcat
ctcgctatagggctaggagacggcaccgtccttctctatcgacacttccttcaatcattg
actacttctttatctctaacatcccttcccaaggctcgcgttgtccacgaatcacatgaa
ccagtgactggcttaggattccgcgaatatccaccaacagataaatcaacacctagcagg
tcatcttcctctcacggattcagtttgtttatcgttaccaccaacagagtactctcggct
ccagtgaacggtaaaggcgaggcgaggacgatagatgatgtgggatgcgctcttggatgt
gctgcaatggactctcagaggaaggaaatggttgtggccagagacgaggctatatatctt
tacagtcccgatggtcgtggggcttgcttggcctatgaaggacccaagtcatctatagca
gtatacaatcataatcttatcataacatcgcctccatattacccgtctgccgcctccgcc
tcggccactgtcaggcattatgccaagtcaaccccaaacggcgaattaggatcgcctgac
atggcaaagatcacaatatttgatttagataacaaggtgatcgggtattctgggacttat
agcgaaggagtgcgggatgttttttgtcagtggggagggatctatgtgtacggcgccaac
ggcaagttatcacgattagacgagcaatccacccaggctaagcttgagacactatatcgg
agaaacctgtacaccctcgccatcaccatggctcggtcacaaggccttgatgaagcaggc
attgccgatatccacagacgatatggtgattatctgtacagtaagggtgatttcgatggg
gcaatgggtcagtttgtcaaaacattggggtccctgcagccaagctatgtcatccgcaaa
ttcctggacgcgcaaagaattcacaaccttacaacctatctccaagaacttcactctcgc
ggtctcgctaatcccgaccacactacactgcttctcaactgttacaccaagacatccgat
cgagctcgtctcgaccagttcattcgtaccgaggctcgacgctcttcgtcgcctgcgcct
gggactggggcgggtggacgggaaggagagttgccttttgatctggatacggccattagg
gtatgtaggcaagcaggattttatgaacatgcggcatatctggccaagaagtttgataag
catgaggattacttgaggattcagattgaggatgcgggtaaggttgacgaggcgttaaga
tatttgagagggctggggccgaaagcctgcgaggtgaatatggtgagatatgggagaaca
ttacttcagcacgaaccagaagccacaacagaactcctcatcgacttatgttctggaaat
cttgggaagaagaaagcggtacatgaagtcgatggaaagacggatgggactaccgctggt
agcggagcgaacgggagcgggccagcgatgttgtcatatctggggtacaacaaggtgact
gggttcttgtctggagatacgccctcaggcgcaacattgaacgaggatgaaaagccaact
gatgctcatgacggtaccgatgctgccagggttggggaggatgaaaaggaagacatgacc
cctagctatgttccagcctccccgagacaatactttgcccactttgtagatcatcgcgag
cttttcatacatttcctcgaatctgtcgctctcaacctttggaaccaaaaagtcgacccc
tcaatttcaaattccagtaccatttcagctcctaaaagagatatggacgcgcctcctccc
accgacccgacagttattgaccaaactgccgtttggaacacccttctcgagctctatctc
tcctcgtctgccgaacaatcgaaacggaaagcactcgccttaatcaacagcgactcgaca
ccttacgatcccatgcatgcgctggttctgtgttcctctgtaggctttagagagggcatg
gtaagactttgggaagggatgggaatgtacgaggatgtcctgaggtattatatggatgag
ggacaagaagccgaagacgcgcaaggaataacgccctcgagcaaggtgttcacccacctt
gaaatgtacggcccgtcacacccacacttatatcctcttgtccttagataccttacatca
tcacctgctatccttacaagacacaagggagagctgtccaaaatattggccaagattgat
gagtatcagatcatgccgccgctcggcgttgtgcagttgttgagtaggaatggggtagtt
gatgttggaagcgtcaaggagtggttgagaggaaaggttgaggagaatgaagaggagatt
gagtctgataaacacctttacgattcttatcgttcggaaactgctgccaagcgcaaagct
attttggataggagcagcgtgtcccagccagaagttttccaagtcacaaagtgtgcagcg
tgcggtgggcagcttgatttaccgagtgtacactttatgtgcaagcacagctatcaccaa
agatgtttaccggactctgatccagaatgtcccatctgtgctcgacaacactcggttatc
cgtgaacttcgacgcaatcagctccgcctggctgacagacacgatttgtttttggaagaa
gtgcaccaggcagaagacgggttcaatgtggtggcggatgcgtttgggagagggttgttt
gggcgagaaggggttgatgagaagattgaggcttag
DBGET
integrated database retrieval system
