Cryptococcus neoformans var. neoformans JEC21: CNN01940
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Entry
CNN01940 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14411
RNA-binding protein Musashi
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNN01940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNN01940
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
CNN01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
3255384
NCBI-ProteinID:
XP_568675
UniProt:
Q5K6W6
LinkDB
All DBs
Position
14:join(561730..561766,561820..562117,562529..562569,562618..562778,562829..563083,563137..563311,563370..563683,563745..563906)
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AA seq
480 aa
AA seq
DB search
MTEDIYKDDLYGDLDLEDLDASQLEELVEPPELDTAPTSTPAASNAAAAPSQPAITASSS
TSAPVEPGSQQYDHQPSYDAATPYQQGQQDNNFGQQQDGQDRIKPSDMPDEGKMFIGGLN
WETTEAGLSEYMGQFGEIDACTIMRDPSGRSRGFAFLTYRDPASVTKVMAQTHHLDGKQI
DPKRAIPRAEHERTAKVFVGGLAPSVTGESLKSFLCQFGQVMDATVMFDKETGRSKGFAF
ATFQDEESVGRAMAASGVELEGKQIEIKKAQPRGTAQGSKFGGNMNPRFNQGTGFSGGMG
SFGGGFDPSSVAMMYQNMMKTGGNMMGGFDPSAMAMMYQNMMKSMGNAPAINPSLAMRNN
AGGTTAGAAAGGAMPMGMGMGAMGGMGGMGGMGGMGGMGMGGMGMGGMGMGGMGGMGGMG
MGGGMNRMGNTRQIPNAPRGPAAMRGPGQQPMGGAGNAPQGGGPGAQRYSTQGNARARPY
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacatttacaaggacgatctctacggcgatctcgacctcgaggatttggat
gcttctcaacttgaggagcttgtcgagcctcctgagctggatactgcaccaacctcgact
cctgctgcatccaacgctgctgcggccccttctcaacccgcaatcaccgcatcatcgtca
acttccgcccccgttgaacccggatcacaacaatacgaccatcaaccatcttatgacgcc
gccacgccttatcagcaaggccaacaggacaacaactttggccagcagcaagacggacag
gatagaatcaagcccagtgatatgcctgatgaggggaagatgttcattggcggtctcaac
tgggaaaccactgaagcgggtctttctgaatacatggggcagtttggtgaaattgatgct
tgcaccattatgcgtgatccttccggtcgttcaagaggttttgcatttttgacttataga
gaccccgccagtgtcaccaaagtgatggcgcagactcatcatctcgacggtaagcaaatc
gatcccaaacgcgccatcccccgcgccgagcatgagcgtaccgccaaagtctttgttggc
ggtctcgctccgtccgtcacaggtgaatccctcaaatctttcctctgtcaatttggtcag
gtgatggatgctactgttatgttcgataaggagactggcagatctaaggggtttgcattt
gctacgttccaggatgaagagtctgtaggcagagcgatggctgctagcggtgttgagctt
gagggcaagcagattgagatcaagaaagctcagccaagaggtactgctcagggatccaaa
tttggaggtaacatgaatccccgctttaaccaaggcacgggattcagtggtggtatgggt
agtttcggcggtggcttcgaccccagttcggtggcgatgatgtatcagaacatgatgaaa
accggaggcaatatgatgggcggcttcgaccctagcgccatggcaatgatgtaccaaaat
atgatgaaatccatgggcaacgctcctgccattaatcccagtcttgctatgcgcaacaat
gctggcgggaccactgccggtgctgctgcagggggtgctatgccgatgggcatgggtatg
ggtgccatggggggtatggggggtatgggaggcatgggcggtatgggcggtatggggatg
ggtggtatgggaatgggcggaatgggtatgggcggaatgggcggaatgggtggaatgggt
atgggaggcgggatgaaccgcatgggcaacactcgacaaattcccaacgctccccgcggc
cctgcggcgatgcgcggaccaggacaacagcccatgggcggcgctggaaatgctccccaa
ggtggtggacccggagcgcagagatattcgacgcaagggaacgcgagggcaagaccatat
taa
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integrated database retrieval system
