Calditerrivibrio nitroreducens: Calni_0021
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Entry
Calni_0021 CDS
T01364
Name
(GenBank) Domain of unknown function DUF1858
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
cni
Calditerrivibrio nitroreducens
Pathway
cni02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Calni_0021
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cni02000
]
Calni_0021
Transporters [BR:
cni02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Calni_0021
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
DUF1858
ThiS-like
Motif
Other DBs
NCBI-ProteinID:
ADR17938
UniProt:
E4TIB3
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Position
20881..22110
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AA seq
409 aa
AA seq
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MERVNINENMTILELVTNYPESIEVLISNGFPQFADKTHIESVGKFLKLSTALKSKGYDI
ETYIKLIEEKISSDKNYKVATKIEENSDINIVGLLPCPVRVPLQEQFTTFLEKFEKDKKI
KVNYKFEAASIGLDYLKENILSINDVDKLPDIFISAGFEAFFDQKSLGLFKEKKVFVDIT
EDEVNENFRSLGIKDPHGDYSIISLVVAVFMVNKKELGDLPVPKSWSDLLKPQYAQRVAL
PVGDFDLFNGILLNIYKDFGYEGIEKIAKTLLKSMHPSQMVKNANMKNAEKPAITIMPYF
FTKMVRDVSSMEVVWPEDGAIVAPVFMLVKRSKREILEPIARFIAGKEMGEILSHRGLFP
SLNKDVKNIVPENAKFKWLGWDFIYSHDIGALIHQLNQLFEKSASEVLK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagtaaatataaatgagaatatgactatattggaattagtaacaaattatccg
gaatctattgaagtcctgatatcaaatggatttccgcaatttgccgataaaacccatatt
gaatcagtggggaagtttttaaaactctctactgctctaaaatctaaagggtatgatatt
gaaacttacataaaactgatagaagagaagattagttctgacaaaaactataaggtggca
acaaagatagaagaaaattctgacatcaatatcgttggacttttgccatgtccggtgagg
gttccattgcaggagcaattcaccacatttctggaaaagtttgaaaaggataaaaaaatc
aaagtgaattataagtttgaggcggcttcgatagggcttgattatttaaaggagaatata
ctttcgataaatgatgtggataaattgccggatatctttataagtgcagggtttgaggca
ttttttgatcaaaagtcactgggtcttttcaaagagaagaaggtttttgtagatattaca
gaggatgaggttaatgaaaattttagatcgttaggaataaaagatccacatggagactat
tccattatatcacttgtggtggctgtatttatggtgaataaaaaggaattgggtgatctt
ccagttcctaaaagctggtcagaccttttaaaacctcaatatgcccagagggtggcactg
ccggtgggtgattttgatctgtttaatgggatattgttgaatatatacaaagattttggt
tacgaagggattgaaaagattgcgaaaacactattaaaatctatgcatccttcacagatg
gtaaaaaatgcaaatatgaaaaatgccgaaaaaccagcaataacaattatgccatacttt
tttacaaaaatggtcagggacgtaagcagtatggaggtcgtctggccggaggatggggcg
attgtggctcccgtatttatgttggtgaaaagaagtaagagagagatacttgaacctatt
gccagattcattgccggaaaggagatgggagagattctatctcatagaggactatttcca
tcgctgaataaagatgtgaaaaatattgtaccggaaaatgctaagtttaagtggcttggt
tgggattttatatattctcatgatataggtgctttgatacatcagttgaatcagctattt
gaaaaatcagcctcagaggtgcttaaatga
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