Calditerrivibrio nitroreducens: Calni_0109
Help
Entry
Calni_0109 CDS
T01364
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cni
Calditerrivibrio nitroreducens
Pathway
cni03030
DNA replication
cni03430
Mismatch repair
cni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calni_0109
03430 Mismatch repair
Calni_0109
03440 Homologous recombination
Calni_0109
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cni03032
]
Calni_0109
03400 DNA repair and recombination proteins [BR:
cni03400
]
Calni_0109
Enzymes [BR:
cni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calni_0109
DNA replication proteins [BR:
cni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Calni_0109
DNA repair and recombination proteins [BR:
cni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Calni_0109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADR18024
UniProt:
E4TIR9
LinkDB
All DBs
Position
complement(104132..107596)
Genome browser
AA seq
1154 aa
AA seq
DB search
MKSRDFVHLHLHSQYSLLDGAIQINKMMDKLKKFGSSAVAVTDHGTMYGVVDFYKKAIAN
NIKPIIGCEVYVAPDDRKNRNYEKGEDKNYHLILLAKNNKGLKNLQYLVSLAQLEGFYYK
PRIDKELLAKYSEGLIGLSACLAGEIPRYVIRGDLKEAVKSAKEYEDILSKGNFYLELQE
NGIPEQRIVNRELISIGKNHDIPIVATNDCHYLEKGDHVAHQILMCIQMQTTISNRDKLE
FHSDQLYVKSPEEMWEAFSEIPEACLNTLKIAEECNVTIDLGKLHLPHYKVPKGYTVESY
FEHLARTGLHRRLARIPADEHKKYIDRLNFELKVIIEKNYAGYYLIVWDFINYSKENGIP
VGPGRGSGAGSLVAYALGITDIDPIKFNLLFERFLNPERKSMPDFDIDFCKNRRDEVIKY
VIDKYGNDRVAQIVTFGQLLARGVIRDVGRVLEIPLKTVDKVAKMIPEAPGMTLEKALKD
DPDLEKNIKQIEKGEELLTNARKLEGLLRQTGMHAAGIVISDKPLIEYVPLCKGQNDEVL
TQYEKNTLEEIGLVKFDFLGLKNLTVIDDTVKLIRRRYNNNFDINSIPLNDKKTYELLSN
GETTGVFQLESAGMKNLLKKLRPNKFEDIIALVALYRPGPIGSGMLDDFVKRKHGEQKVT
YFLPELEPILQDTYGIIVYQEQVMQIAQVIAGYSLGSADLLRRAMGKKKPEEMQKHKEIF
LYGSEELKIEGAKKRGFDLKIAEEIFNLMEKFAEYGFNKSHSAAYALISYQTAYLKAHYP
VEYMSQLLSSELDKGEKVVVFIEECKRMGIKVLPPTINKSSKDFIIDENSIRFGLGAIKN
VGFSAIESIVAAREDGEFKSIYDFCSRVDLRTVNKRVVESLIKTGVFDEFGKKRKVLLNV
LDAAIEEGQRKQKNREIGITTVEELLGISDTEEYYPDLDEFQEHDILKMEKELLGFYLTN
HPLSSYSNILSTLTIGSNELELMEEEKDVVVGGIIKNIKTHLARTGEKMAFVTLEDLEGS
FDIVVFASLYKEYIQILEEDKIIIVKGRYSSNGENRSVVANEILEPNEAMEKMITSITIL
INLTGFTEDRVLKLKNIIDNYKGESTVKFALEQAGQFKALLKVNSDLKVKPCLALFSQLD
SLLGENRYEIDLEY
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtagagattttgttcatcttcacctacatagccaatattccctactggacggt
gcaatacagattaataaaatgatggataaactaaaaaaatttggatcaagcgcagtggcc
gtcaccgatcatggtactatgtacggtgtggtggatttttataaaaaagccattgcaaac
aatataaaaccgatcatcggttgtgaggtatacgtagctccggatgacagaaaaaacaga
aattacgaaaaaggtgaagataaaaattaccatctaattctccttgcaaaaaacaacaaa
ggactgaaaaatctccaataccttgtttctcttgcccaattggagggtttttattacaag
ccaagaatcgataaagagcttctggcaaagtattcggaaggtttaatagggttatcggca
tgtctggctggggaaataccaagatatgtgataagaggtgatttaaaggaagcggtaaaa
tctgcgaaagaatatgaagatatccttagcaaggggaatttctatctcgaacttcaggaa
aatggtatacccgagcagaggattgtaaatagggaacttatcagcataggtaaaaatcac
gatataccaattgtggccacaaacgactgtcattatcttgaaaaaggggatcatgtggct
catcaaatacttatgtgtattcagatgcaaaccaccatctcaaacagagacaaacttgaa
tttcattctgaccagctatacgtaaagtcaccggaggagatgtgggaggctttttcagaa
ataccggaagcctgcttaaataccctcaaaattgctgaagaatgcaacgtaacgatagat
ctggggaaactacacctgccacattataaagttccaaaagggtacacggtggaatcctac
ttcgaacaccttgcaaggacaggtttacacagaagattagccagaatcccggcggatgaa
cataaaaagtacatagataggttaaatttcgaattaaaggtaataatcgaaaaaaactat
gcaggatactatcttatagtctgggacttcatcaattattcaaaagaaaatggtatccct
gttggacccggtagaggatccggcgcaggttcccttgtggcttatgcactgggaattacg
gatatagatcccataaaatttaatctcctttttgaaagatttctaaaccccgaaaggaaa
agcatgccagacttcgatatagacttctgcaaaaatagaagggatgaggtaataaaatac
gtcatcgacaaatatggaaatgacagagtcgcccagattgttacattcggacagcttctg
gcaagaggtgtgatcagagatgtggggagagtgctggagatccctcttaaaacggtggac
aaagtggctaaaatgatcccggaagcccccggtatgacacttgaaaaagcccttaaagat
gacccggatcttgaaaaaaatataaaacagatagaaaagggggaagaacttcttaccaat
gcaagaaagctggaagggcttctaagacaaacagggatgcatgctgcagggatagttatt
tcagataaaccgctaatagaatatgtccccctttgtaaaggccaaaatgatgaagtttta
acacaatacgaaaaaaatacccttgaagagattggacttgtaaaattcgactttttgggt
ctaaaaaaccttacggtgatagatgataccgtaaagcttataagaagaagatataacaac
aactttgatataaatagcatccccttaaacgacaaaaaaacatatgaacttttatcaaac
ggcgagacaaccggagtattccagcttgaaagtgccgggatgaaaaacctactgaaaaag
ctgagaccaaataagtttgaagatatcatagctcttgtggccctttaccgtccaggcccc
atagggagtggtatgctggatgactttgtaaaaaggaagcatggagagcaaaaggtcacc
tacttccttccggaacttgagcctattcttcaggatacctacggcataatagtctaccag
gagcaggtaatgcagatagcacaggtaatagccggatatagccttggtagtgcagacctt
ctcagaagggctatggggaagaaaaagcctgaagagatgcaaaaacacaaagagatcttc
ctttatggtagcgaagaacttaagatagaaggggctaaaaagcgaggttttgatctaaaa
atagccgaagagatattcaatcttatggaaaaattcgctgaatatggcttcaacaaaagt
cactccgctgcatacgctctgatatcgtatcaaacggcttaccttaaggcccactaccct
gttgaatatatgtcccagcttttatcttcggagcttgacaaaggtgaaaaggtggtggtc
tttatagaagagtgcaaaaggatggggatcaaggtcttaccgccaacaataaataagagc
agcaaagatttcatcatagatgaaaactccatccgatttggccttggtgccataaaaaat
gttggattttccgccattgaatctatcgtagcggctcgggaagatggtgagtttaaaagt
atctacgatttttgcagcagggtagatttaagaaccgtaaacaaaagggttgtggaatcc
cttataaagacaggtgtattcgatgagtttggcaaaaaaagaaaggtactcttaaatgtt
ctggatgccgcaatagaggaggggcaaagaaagcagaaaaacagagagatagggatcaca
acggtggaagaattattgggtatttccgataccgaagaatactacccagatcttgatgaa
tttcaggaacatgatatactgaaaatggagaaggagcttttgggcttttacctcaccaat
caccccctatcctcatacagtaatatccttagtaccctcaccatcggatccaatgaactg
gagctaatggaggaggaaaaggacgttgtggtgggaggtataataaaaaatatcaaaact
cacctcgccagaaccggcgaaaaaatggcgtttgtgaccctggaggatcttgagggaagt
ttcgatatagtggtattcgcttccctttacaaagaatatatacagattttagaggaagat
aaaattataatcgtaaaaggaagatacagtagcaacggtgaaaatcgatctgtagtggca
aatgaaatattagagccaaacgaagcaatggaaaaaatgataacatccatcactatacta
atcaacctcactggatttactgaggatcgggtattaaaactcaaaaatataatagataac
tataaaggggaatccaccgttaaatttgcactggagcaggcaggtcagtttaaagcactg
ttgaaagtaaatagtgatcttaaagtaaaaccctgccttgcactattttcccaattagat
agccttttgggcgaaaatagatatgaaatagatctggagtattag
DBGET
integrated database retrieval system
