Calditerrivibrio nitroreducens: Calni_0372
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Entry
Calni_0372 CDS
T01364
Name
(GenBank) histone family protein DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
cni
Calditerrivibrio nitroreducens
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cni03032
]
Calni_0372
03036 Chromosome and associated proteins [BR:
cni03036
]
Calni_0372
03400 DNA repair and recombination proteins [BR:
cni03400
]
Calni_0372
DNA replication proteins [BR:
cni03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Calni_0372
Chromosome and associated proteins [BR:
cni03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Calni_0372
DNA repair and recombination proteins [BR:
cni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Calni_0372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADR18285
UniProt:
E4TEF9
LinkDB
All DBs
Position
complement(380331..380609)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKSELIEKIAEENPHLSKRQVEFIVNGVFNSIKSALESDEKVEIRGFGSFKVRKKNRKE
ARNPKTGEKVIVEAKSVPYFKPSREIKLALLK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagaattaatagaaaagattgctgaagaaaatcctcatcttagcaaaaga
caggtggagtttatcgtaaatggtgtttttaactctataaaatcagcacttgaatcagat
gaaaaagtggagattaggggatttggttcctttaaagtaaggaaaaaaaatagaaaagaa
gccagaaatcccaaaactggtgaaaaagtaatagtagaagccaaaagtgtgccttatttc
aaaccaagcagagaaattaagctggctcttcttaaatag
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