Calditerrivibrio nitroreducens: Calni_0675
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Entry
Calni_0675 CDS
T01364
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
cni
Calditerrivibrio nitroreducens
Pathway
cni02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Calni_0675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cni03000
]
Calni_0675
Transcription factors [BR:
cni03000
]
Prokaryotic type
Helix-turn-helix
Other families
Calni_0675
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
GAF
AAA
AAA_7
Mg_chelatase
GAF_2
nSTAND3
bpMoxR
AAA_3
AAA_16
HTH_23
AAA_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADR18586
UniProt:
E4TG36
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Position
706521..708107
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AA seq
528 aa
AA seq
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MFYSDVLKFYKLALETVFQIGKILSMSFYGSNPYENILNILSDYLNVKRGMILIYDKQSD
YLFPKAAVGIDSLQYNKLFYRPKEGIVGRVFSMGVSMMIPDIDEEPNFLGKIEREYNYEK
TSFYAMTIKDSENVKYGVLAIDKDAYDVVNVKTEFDLLSMICIMLGNFIKQKIQIEENIK
TLEEKNLRLSAQIITKYGFKEIVGKSKVMKNVFEKIHMLLKSKAPVLIIGESGTGKEVVA
KTIHYNSERKNGPFIAINCAAIPAELIESEIFGYEKGAFTGAVAQKKGKFELANGGTLFL
DEIGDMPLGLQSKLLRILQEKEFERVGGTSTIKTDVRIIAATNKNLLEEVHKGNFRLDLF
YRLNVFNIILPPLRDRKEDIPYLVEHILKKLNNEYGLNKKIDKQIFAKLMNCDFPGNVRE
LENCIERAYFNSPSNVISYDDFSCNLCKIPMPKIETCELNDVKQFDNNDKNVDMKENISP
ETYSERDKIIEALRKCGWVQAKAARLLGVTVRQLNYRIKKYNINIQKI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgttctattctgatgttttgaaattttataaacttgcccttgaaactgtttttcaaatc
ggcaaaattttatccatgtcattttatggctccaatccatatgaaaatatcctgaatatt
ttatccgactatttaaatgttaaaagggggatgattctgatatatgataaacaatctgac
tatcttttccccaaagctgcggtagggattgatagtttgcagtacaacaaattgttttac
aggccaaaagaggggatagttggtagggttttttcaatgggtgtttcaatgatgattcct
gatatagacgaagaacccaattttcttggtaagattgaacgtgaatataattatgaaaaa
acttccttctatgctatgactatcaaagatagtgaaaatgttaaatatggggtgcttgcg
atagataaggatgcatacgatgtggttaacgtaaagactgagtttgatcttttaagcatg
atttgcatcatgctcggaaattttataaaacagaaaatacaaattgaggaaaatataaaa
acactcgaggagaaaaatttaaggctatctgcacagattataacaaaatacgggttcaaa
gagatagtgggtaaaagtaaagtgatgaaaaatgtatttgaaaagatacatatgttactt
aaatcgaaagctcctgtgctgataatcggagagagtggtaccggaaaggaggttgtggca
aagaccatccattataatagtgaaagaaaaaacggtccttttattgctataaattgtgct
gcaatccctgctgaattaatagaaagtgaaatttttggttatgaaaaaggcgcttttaca
ggcgctgtagcacagaaaaaaggtaaattcgaacttgccaatggtggaacactttttctt
gacgaaataggggatatgcctcttggcttgcagagcaaacttctgagaattttgcaggaa
aaagaatttgaaagggtgggggggacttccaccataaaaaccgatgtgagaataattgct
gcaaccaacaaaaatttacttgaagaagttcataaagggaatttcaggctcgatttattt
tatcgtttgaatgtttttaatataattttgccacctttaagggatagaaaggaagatata
ccgtatcttgtggaacatattttgaaaaaattgaataatgaatatggacttaacaagaag
atagataaacagatattcgcaaaattaatgaattgtgattttcctggaaatgtcagggaa
cttgaaaactgcattgaaagggcttattttaattctccttccaatgtaatctcgtacgat
gatttttcatgtaatctctgtaaaatcccaatgccaaagatcgaaacttgtgaattaaat
gatgttaaacagtttgataataacgataaaaatgttgatatgaaggaaaatatcagtcct
gaaacttattcggaaagggataaaataattgaagccttgagaaaatgcggatgggttcag
gcaaaagcggccaggttgttaggggttactgttcgccagctgaattacaggattaaaaaa
tataatataaatattcaaaaaatttaa
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