Calditerrivibrio nitroreducens: Calni_0948
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Entry
Calni_0948 CDS
T01364
Name
(GenBank) deoxyribonuclease/rho motif-related TRAM
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cni
Calditerrivibrio nitroreducens
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cni03009
]
Calni_0948
Enzymes [BR:
cni01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Calni_0948
Ribosome biogenesis [BR:
cni03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Calni_0948
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Methyltransf_31
Methyltransf_11
RrnaAD
Methyltransf_12
RVT_1
Methyltransf_23
EAD11
Methyltransf_15
Ubie_methyltran
OmpA_like
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
ADR18859
UniProt:
E4THN4
LinkDB
All DBs
Position
991398..992564
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AA seq
388 aa
AA seq
DB search
MYVNNIEIYDNVYGGYGIGRLDNGKVVFVPFGVKGDIANIKIKEEKKSFSYGELIELVKP
SHHRVDGFCKYIGVCGGCSYGFLDDDFEIEVKRRIVENSFRNISDFKIDEYVHSNKRDYR
VRCRMRLKWGGLFYKKFNSNELVSIDECPILKPSILNKLKDVAGSYSDTDCDISIIENEK
GEELIFLDSDIDITDSKYNIKSKRCQKGLKSIEFNINKHTIPAGYRSFFQTNRYLFESFQ
RKVVEQLKGYETVLEFYCGSGFFTIPLSKEVRKIVAIDQNDEALRLLKQQATGRAEVLNT
DLKKDIINIKGRFDAVLVNPDRDGLSKGVLKVIMDKKPEIIVYVSCNPQTMSRDIKNFMN
RYKMCQFTVVDQFYKTYHIESIAVLTER
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtatgttaacaatatagaaatttatgataatgtttatggtggttatggaattggcaga
cttgacaatgggaaggttgtttttgttccgtttggagtaaagggagatattgcgaatatt
aagataaaagaggaaaagaagagcttttcctatggggaattgattgaattagtcaaacct
tcacaccacagagtagatggtttttgtaagtatataggtgtttgtgggggatgttcctac
ggttttctggatgatgattttgaaattgaggtaaaaaggaggattgttgaaaatagtttc
agaaatatttcagattttaaaatcgatgagtatgtccactcaaataaaagggattacaga
gtaagatgcaggatgagattgaagtggggaggcctgttttataaaaagtttaactccaat
gaacttgtgtcgatcgatgaatgccccatattgaagccgagtattttgaacaaactaaaa
gatgttgcaggtagctattctgatacagattgtgatatatctattattgaaaatgagaaa
ggggaagaacttatctttttagattcagatatagatataactgatagtaaatataatatt
aaatcaaaaagatgtcagaagggattaaaatcgatagagttcaacatcaataaacataca
atcccggctggatataggagcttttttcagacaaatagatatcttttcgagtcttttcag
agaaaggttgttgaacagctcaaagggtatgaaacggtacttgagttttattgtggtagt
ggtttttttaccattcctctatcaaaagaggttagaaaaattgtggcaattgaccaaaac
gatgaggcactcagattgttaaaacagcaggccactggtagagctgaagtattaaataca
gatttaaaaaaagatatcatcaatataaaaggtcgtttcgatgctgtgctggtcaaccct
gatagggatggactttctaaaggggtattaaaggtgatcatggataaaaagcctgagatt
attgtttatgtttcctgcaatccccaaacgatgtcaagagatattaaaaattttatgaat
agatataaaatgtgtcaattcactgttgttgatcaattttacaaaacttaccatatagag
tctattgctgtgttgacagaacgttag
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