KEGG   Calditerrivibrio nitroreducens: Calni_1228
Entry
Calni_1228        CDS       T01364                                 
Name
(GenBank) RNAse III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
cni  Calditerrivibrio nitroreducens
Brite
KEGG Orthology (KO) [BR:cni00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Calni_1228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cni03019]
    Calni_1228
   03009 Ribosome biogenesis [BR:cni03009]
    Calni_1228
   03036 Chromosome and associated proteins [BR:cni03036]
    Calni_1228
Enzymes [BR:cni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Calni_1228
Messenger RNA biogenesis [BR:cni03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Calni_1228
Ribosome biogenesis [BR:cni03009]
 Eukaryotic type
  90S particles
   RNase
    Calni_1228
 Prokaryotic type
  rRNA processing factors
   Calni_1228
Chromosome and associated proteins [BR:cni03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Calni_1228
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 DSRM_CARF DND1_DSRM
Other DBs
NCBI-ProteinID: ADR19136
UniProt: E4TJ04
LinkDB
Position
1285409..1286098
AA seq 229 aa
MNLEKLNEILNYNFENKELLIEALTHSSYSYENKLCRNYERLEFLGDAVLQLIVSEYLIF
KYKDFDEGMLSRYRAYFVSEEFISELAKQIDLGNFIRLGKGELNSGGKDRPSILCDIFES
IVAAMYLDGGYNEARRFIITIASDKIDEVIQQNIFTDYKSELQKLTQKIFESLPDYKVKD
ETGPEHDKTFIVDLYINDRYYCSGSGKSKKKAEQDAAKKAFLMLSEHIV
NT seq 690 nt   +upstreamnt  +downstreamnt
atgaatcttgaaaaactaaatgagatattaaactacaattttgaaaataaagagcttctt
atagaagctcttacccactcatcctactcatacgaaaacaaactttgtaggaattacgaa
agattggaatttttaggggatgcagtacttcaactgatcgtttcggaatacctcatattc
aaatataaagatttcgatgaagggatgctttccagatacagggcatactttgtcagtgaa
gagtttataagtgaacttgccaaacagatagatttaggaaatttcataagattaggtaaa
ggtgaattgaattccgggggtaaagataggccttccattttgtgtgatatatttgaatct
atcgttgcggcgatgtatctcgatggcggatacaatgaagccagaagatttataatcacc
atcgcctctgataaaatagacgaagtaatacaacaaaatatatttacagattacaaaagt
gaattacagaaactgacccaaaaaatctttgaatcgctaccagattataaagtaaaagat
gaaaccggcccagagcacgataaaacctttatcgttgatctttacattaatgacagatac
tattgtagcggcagtggaaagagtaaaaagaaagcagagcaggatgccgctaaaaaagct
tttctaatgttgagtgaacatatagtataa

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