Calditerrivibrio nitroreducens: Calni_1228
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Entry
Calni_1228 CDS
T01364
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cni
Calditerrivibrio nitroreducens
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Calni_1228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cni03019
]
Calni_1228
03009 Ribosome biogenesis [BR:
cni03009
]
Calni_1228
03036 Chromosome and associated proteins [BR:
cni03036
]
Calni_1228
Enzymes [BR:
cni01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Calni_1228
Messenger RNA biogenesis [BR:
cni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Calni_1228
Ribosome biogenesis [BR:
cni03009
]
Eukaryotic type
90S particles
RNase
Calni_1228
Prokaryotic type
rRNA processing factors
Calni_1228
Chromosome and associated proteins [BR:
cni03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Calni_1228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DSRM_CARF
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ADR19136
UniProt:
E4TJ04
LinkDB
All DBs
Position
1285409..1286098
Genome browser
AA seq
229 aa
AA seq
DB search
MNLEKLNEILNYNFENKELLIEALTHSSYSYENKLCRNYERLEFLGDAVLQLIVSEYLIF
KYKDFDEGMLSRYRAYFVSEEFISELAKQIDLGNFIRLGKGELNSGGKDRPSILCDIFES
IVAAMYLDGGYNEARRFIITIASDKIDEVIQQNIFTDYKSELQKLTQKIFESLPDYKVKD
ETGPEHDKTFIVDLYINDRYYCSGSGKSKKKAEQDAAKKAFLMLSEHIV
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgaaaaactaaatgagatattaaactacaattttgaaaataaagagcttctt
atagaagctcttacccactcatcctactcatacgaaaacaaactttgtaggaattacgaa
agattggaatttttaggggatgcagtacttcaactgatcgtttcggaatacctcatattc
aaatataaagatttcgatgaagggatgctttccagatacagggcatactttgtcagtgaa
gagtttataagtgaacttgccaaacagatagatttaggaaatttcataagattaggtaaa
ggtgaattgaattccgggggtaaagataggccttccattttgtgtgatatatttgaatct
atcgttgcggcgatgtatctcgatggcggatacaatgaagccagaagatttataatcacc
atcgcctctgataaaatagacgaagtaatacaacaaaatatatttacagattacaaaagt
gaattacagaaactgacccaaaaaatctttgaatcgctaccagattataaagtaaaagat
gaaaccggcccagagcacgataaaacctttatcgttgatctttacattaatgacagatac
tattgtagcggcagtggaaagagtaaaaagaaagcagagcaggatgccgctaaaaaagct
tttctaatgttgagtgaacatatagtataa
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