Calditerrivibrio nitroreducens: Calni_1663
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Entry
Calni_1663 CDS
T01364
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
cni
Calditerrivibrio nitroreducens
Pathway
cni02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cni00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Calni_1663
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
cni02022
]
Calni_1663
02035 Bacterial motility proteins [BR:
cni02035
]
Calni_1663
Two-component system [BR:
cni02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Calni_1663
Bacterial motility proteins [BR:
cni02035
]
Pilus system
Twitching motility proteins
Calni_1663
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_16
nSTAND3
AAA_2
bpMoxR
AAA_3
cREC_REC
AAA_22
RimK
Motif
Other DBs
NCBI-ProteinID:
ADR19570
UniProt:
E4TFJ7
LinkDB
All DBs
Position
complement(1719289..1720629)
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AA seq
446 aa
AA seq
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MPSILILDDEKSLREILEILFINEGFSVFLARNISEAKKIIDNYKIDIILSDLVIGKESG
LDFIRYTYENYPGVPSVLITAYASPDTAMESIKLGVVDYISKPFDNDELVKMVKSIVCKE
CDKKYPDELKKIIGKSRFIDELKDKIIDIATGDSSVLITGESGTGKELVARAIHELSGRK
NKPFIPINCGAIPSEIVESELFGYKKGAFTGAYADKKGLFEMASGGTVFLDEITELPINL
QVKLLRVLQERKIMRVGSTDEQDVDIRVISATNRDLEKEVDEGRFRSDLYYRINVVRIEL
IPLRERIEDIEPLAKYFLKKFSDQMGKNIKEISYPVMELLKSYDFKGNVRELQNIIERGV
ALEKSDRLLPASILGYFSKKIADDEDVLPELKLDNPIQLEKILETIEKKYITSALNLTGN
NQSRAAKLLGISLRILRYKIEKYRLL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatactaattcttgatgatgaaaaatcactgagggagattcttgagatcctt
tttataaatgaaggtttttccgtttttttagccaggaatatatcggaagcaaaaaaaatc
attgataactataagatagatataatactttccgatcttgttatcggcaaagagagcggc
cttgattttataaggtatacttacgaaaattatccgggggttccttccgttctcattact
gcttatgctagtcctgataccgcgatggagtcgataaagttgggtgttgtggactatatc
tccaagcctttcgataatgatgaattggttaagatggtaaaaagtattgtatgtaaagag
tgcgataaaaaatatccagatgaactgaagaaaataataggtaaaagtagatttatagat
gaattaaaagataagataatcgatattgctacgggggattcctctgtattgataacgggg
gagtctggtaccggaaaggaacttgtggcgagggccatccatgaattaagcggaagaaag
aataaaccttttattccaataaattgtggtgcaatccccagtgaaattgtagagtctgaa
ctttttgggtataagaaaggggcttttaccggggcatatgcagataaaaaggggttattt
gagatggcctccggtggtactgtgtttctggatgagataacagagcttcctattaacctt
caggtaaagctacttagagttcttcaggagcggaagattatgagggtgggttctacggat
gagcaggatgtggatataagggtaatttcagccacaaatagagatctggaaaaagaggtt
gatgaggggagatttagaagtgacctgtactatagaataaatgtagtgagaatagaatta
atccccctacgggagaggattgaagatatagagcctcttgcaaaatattttttgaagaag
ttttcggatcagatggggaagaatataaaagagatctcttatcctgtcatggagctattg
aaatcttacgattttaaagggaatgtgagagagttgcagaatatcatagagcggggggtt
gctctggagaaatcagataggctacttccggcaagtattttaggttatttctcaaaaaag
atcgctgatgatgaagatgttttacctgagcttaaactggataaccctatacaacttgaa
aagatacttgaaactatcgaaaaaaagtatataacatcagcattaaatcttaccggtaat
aatcagagcagggccgcaaagcttttagggataagcttgaggattttgaggtataagatt
gaaaaatatcgtttgttataa
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