Caloenas nicobarica (Nicobar pigeon): 135984475
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Entry
135984475 CDS
T11056
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04810
Regulation of actin cytoskeleton
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135984475 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135984475 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135984475 (CYFIP1)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135984475 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
135984475 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
LRIF1
Motif
Other DBs
NCBI-GeneID:
135984475
NCBI-ProteinID:
XP_065482876
LinkDB
All DBs
Position
1:complement(97168385..97248319)
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGTKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacaagtaacgctggaggatgccttgtccaacgtggatctcttggaagaatta
ccactgccagaccagcaaccatgtattgaacctccgccatcatctctgctttaccagcca
aacttcaacactaattttgaagacagaaatgcatttgtcactggcattgcaagatacatt
gagcaagctacagtccattctagcatgaatgaaatgctagaagaaggtcaggaatacgcg
gtcatgttatacacatggagaagctgctcaagagccattcctcaggtcaagtgcaatgag
cagcctaacagagtagaaatttatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaacgcgatcgaaagattttgtggggaggta
agacgcttgtgccatgcagagaggaggaaggattttgtatctgaagcgtatctgatcacg
ctgggcaaattcatcaacatgtttgcggtattggatgagctgaaaaatatgaagtgcagc
gtgaagaacgaccactcagcctacaagcgagctgctcagttcctacggaaaatggcagat
cctcagtccattcaagaatcccagaacctctccatgttccttgccaaccacaacaagata
acacaatctttacagcagcagttggaggtgattgttggctatgaagaactgcttgcagat
attgtaaatttgtgtgtggactactatgagaacaaaatgtatctaacgcccagtgagaaa
catatgcttttgaaagttatgggctttggattgtacctgatggatggaagtgtcagtaac
atctataagctggatgcaaagaaaaggataaatttagccaaaatagacaaattctttaag
cagttgcaggttgtcccactctttggtgacatgcagattgaacttgccagatacattaag
accagtgcccattacgaggaaaataaatccagatggacgtgcacgtcttccagcagcagt
ccccagtacaatatatgtgagcagatgatccaaatcagagaagaccatatgcgtttcata
tcggaactggctcgttacagcaacagtgaggtggtgactgggtctggtcgacaggaagct
caaaaaacagatgcggaatatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagtgcacacgtcatggaagtgtattcatggaagctagtgcacccaact
gacaaatattctaataaagattgtcctgacaatgcagaagagtatgaaagagcaacaaga
tacaattatactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaggtgctgatgggaaggatggaaagtgttttcaaccatgccattcgccacaccatt
tatgcagctcttcaagactttgcccaggtcacacttagagagccattaagacaagccatt
aaaaagaaaaaaaatgtcattcagagtgttttgcaggccatcagaaagacagtctgtgac
tgggaagcgggtcatgagccgttcaatgacccagctctaaggggggagaaggaccccaaa
agtggttttgacatcaaagtcccaaggcgtgcagtgggaccctccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaattccaccgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctgcagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcctagagctgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattctgacggaccatattttggagaccaaagaggcatcaatg
atggagtatgttctgtattctttggacctctataatgacagtgctcactatgcacttact
aaatttaagaagcagttcctctatgatgagatcgaagcagaggtaaacctatgttttgac
caatttgtctacaagctggcagaccaaatatttgcatactacaaggcaatggccggcagc
ctgcttctggataaacgattacgttcagaatgcaagaaccaaggggcgaccattcagctg
ctgcagtccaaccgctacgagacgctgctcaaacaaagacacgtccagcttcttggtagg
tcaatagacctgaaccgactgatcactcagcgaatttcagcagccatgtacaggtcaatg
gaactggcaattggccgatttgaaagtgaggatttgacttccattgtggagctggatggc
ttgatagagataaacaaaatgactcacaagcttctgagtagatatatgaccttggacagc
tttgatgccatgttcagagaagccaatcacaacgtgtcagccccttatggaagaatcact
cttcacgtcttttgggaactcaattatgattttcttccaaactactgctacaatggatcc
acgaacagatttgttcggaccgtgctaccattttctcaggagtttcagagagataagcag
cctaatgcacagccacagtatctctatggaacaaaggcattgaatctggcatattccagc
atctacagcaactacaggaattttgttggtccccctcactttaaagtcatctgtagactt
cttgggtatcagggtattgcggtggtgatggaggagttgctgaaagttgtcaagagcctg
ttacaagggacgattcttcagtatgtcaagaccctaatggaagtgatgcctaagatctgt
aggttaccaagacatgagtatggttctccaggtatcttggagttttttcaccatcagttg
aaggacattgttgaatatgcagaactgaagaccgtctgcttccagaatttacgggaagtg
ggaaatgctgtcttgttttgcctcctcattgaacagagtctgtccctagaggaggtgtgt
gacctgttgcacgcggcaccgttccaaaatatcctgcccagagttcacgtcaaagagggt
gaaagacttgatgctaaaatgaagagactagaatcaaaatatgctccactacatttggtt
cctcttattgaaagactgggcacaccccagcaaatagcaatcgcaagggaaggggacttg
ctgaccaaagaacgcctctgctgcggcctgtccatgtttgaggtcatcctgacaaggatc
cgctccttcctggatgaccccatctggcgcgggcccctgcccagcaacggggtgatgcac
gtggacgagtgcgtggaattccatcgcctctggagcgccatgcagtttgtctattgcatc
cccgtgggaacgcacgagttcaccgtggagcagtgctttggagacggcttgcactgggct
ggctgtatgatcatcgtgcttttgggacagcagcgtcgctttgatgtgttggatttctgc
taccacctattgaaagtccaaaagcatgatggcaaagatgaggttataaagaatgtgcct
ttgaagaaaatggttgagagaattcgcaagttccagattctgaatgatgagataattgct
attttggacaagtacttgaagtcaggcgatggagagagcacacccgtggaacatgtgcgc
tgcttccagccacctattcaccagtctcttgccagcaactag
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