Caloenas nicobarica (Nicobar pigeon): 135984585
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Entry
135984585 CDS
T11056
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
cnic05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135984585 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135984585 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135984585 (NUP98)
03036 Chromosome and associated proteins [BR:
cnic03036
]
135984585 (NUP98)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135984585 (NUP98)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135984585 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
135984585
NCBI-ProteinID:
XP_065483114
LinkDB
All DBs
Position
1:complement(215586542..215629611)
Genome browser
AA seq
1797 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSNNNTGGLFGSTQTKPGG
LFGSTTFNQPATSSTSTSFGFGTSTGTSNSLFGTTSTGGGLFSSQSNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
SINTKHQCITAMKEYESKSLEELRLEDYQANRKGPSNPVGAGAATGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFVNTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQSKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLNSSNLFSPVNR
DNEDLASPSEYPENGDRFFLSVPPDENHRQDGEREEEEDHHEVTRFYTNPIAKPIPQTPE
NAAHKHQNSVDDTIVALNMRAALRNGLEGSSEDASFHDDSLQDEREEEPETVHHPHPAGI
VLTRAGYYTIPSMEELARFTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDERKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPDRLAEMNYEGRLES
VSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEEHPLKVDAKKLKTAPVAPPGL
MPPQQMALDGKPTPPAQSPEVEQLGRVVELDSDMADVTQEPPREAPPEDGAAEEPEAVPA
STHIASSLGVNPHVLQIMKASLLADDDDLDLILDPYPAKPPVKIDTSQEICSPRLPISKP
QGQKRYSAGGLLQSKFANIILQPPSAAAQDPKGARTSSSPLCAPLWPATSPLAPTFPVRP
SVPEVPMKTVGVRRQQALVPRDRSIAYGKGKLLMDMALFMGRSFRVGWGPNWTLVNSGDR
LSRSCETEDPQCEPVEYGFLPTPVAPKSLSESCFKVHVEKLSVEQRPADREQQLYLIPLE
IKLQHSTVHMDQHCPLLAPNPGVAAIHDYADWVRKAAEDPALAETVVKHWLLTWTLCEAI
WGNLKELEASLEEPSEYILALERRRAFSRWLSDTAARRIDEEVSLSRHGSPIEAVFSCLT
GRRIGEACRLAQLSGDHRLALLLSQLAGSQPLRDLLTMQLVDWHRLQADCFIQEDRLRVF
ALLAGKPVWQLSERTSINVCSLLDWKRCVAVHLWYLLPPTASISKALAMYESAFQNTPEC
EKYACCPLPPYLEDSGCVIEEDDNAGRPLRDVCFHLLKLYSDRHYDLEQLLDPRSVTCDP
LDHRLSWHLWEVLRALNYTHLGRQGQGVLNASYAAQLESRGLWEWAVFVLLHEPDAHTRE
KSVRELLHRHCQLAETPESWAKETFLTQRLCVPHEWIHQAKAVRARVEGDRHREALFLFK
AGHWNQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWDTAGLVYLDYIRV
IEMLDRIQQLDSSPYELERLHTKVTSLCNRIEQIQCHSAKDRLAQSDMAKRVANLLRAVL
SLQPPPEPGPPASPDPQSVPLRLLAPHVGRLPMPEDYVLEELRGLTQSYLRELAVTH
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggcactccatttggaggcagcaccggctttgggacaacctcg
acttttggacaaaatgctggctttggcacgacgagcggaggagcgtttgggacgtcggcc
ttcgggtcgaacaacaacactggaggcctcttcgggagcacgcagacaaaaccgggagga
ttgtttggttccaccacgttcaaccagccagccacctcctccaccagcaccagctttggg
tttggcacgtccaccggcacgtccaacagcctgtttggcaccaccagcacgggtggcggg
ctcttctcgtcccagagcaatgcctttgcgcagaacaagccagccggctttggaaacttt
ggaaccagtaccagcagcggaggtctctttggaaccaccaacacgacttccaatcctttc
gggagcacgtcgggctcactctttggcccaaccagttttaccgctgctccaactggcacc
actatcaagtttaacccgccaactggtaccgatacgatggtgaaatccggagtcagcacc
agcatcaacaccaagcaccagtgtattactgccatgaaggagtacgaaagcaaatctctc
gaggagctccgtttagaagactaccaggcaaacagaaaagggccctcgaatcccgtggga
gcaggagcagccactggcctgtttggctcttcgactgccacgtccagcacggccacggga
ctcttcggctcctctaccactaacacgggcttttcctatggacagaataaaactgctttt
ggaaccagtacgactggcttcgggacaggaacgacgggggggctcttcggtcagcagtct
caaactacaagtctgttcaacaaaccatttggtcaggccacgacgacgcagaacacgggc
ttttcttttgtcaataccagcactctggggcagcccaacaccaacaccatgggtctgttc
ggggtcacccagccctcgcagcccggaggcctgttcggaacagccgccaataccaacgct
ggcactggatttggcaccggaactgggctttttggccaggctaacacaggatttggtgtt
ggcggttcgaccctgtttgggaacaaaccggctggatttggaaccaccacgaccagcgct
ccctcgtttggcaccaccacgggcggtgggctcttcggttttggcgccaacactgctgga
aacagtttgtttggaaacaagcctgcgacggggacgctgggaaccggccttgggacgggc
tttggaacagctctgggagcaggacagacctcactgtttgggaacacccagtctaagctc
ggcgggacgctgggaacaggggcgtttggagcaccgggcttcaacacatcgacagctacg
ctgggcttcggagcccctcagcctgctgtggcgctgacagacccgaacgcgtcagctgcc
cagcaagctgtgctccagcagcatctcaacagcttgacgtactcgcccttcggagactct
ccgctcttcagaaaccccatgtcagacccaaagaagaaagaagagaggctgaagccaacc
aacccagcggctcagaaggccctaacaacacccacccactacaaattgactccgcgccca
gcaaccagagtgcggccaaaagctctgcagtcggctggatccgctaaatctcagctcttc
gatggcctcgatgacgatgagccatccctgtccaacggcgccttcatgccaaagaagagc
atcaagaaattggttctgaagaatctcaacagcagcaatctcttctcgcctgtcaatcgt
gacaatgaagacctggcttctccctcggagtatccggagaacggcgaccggttctttctg
tcggtgcctcccgacgaaaaccacagacaagacggcgagcgagaggaggaggaggatcac
cacgaggtgacgaggttttacaccaaccccatcgccaagcccatcccgcagacccccgag
aacgctgcgcacaagcaccagaacagcgtggacgacaccatcgtggctctgaacatgcgg
gcggccctgcgcaatgggctggagggcagcagcgaagacgcctcgttccacgacgattcc
ctccaggacgagcgcgaagaggagcccgagaccgtgcatcacccgcatcccgcagggatc
gttctgacgagagctggttattacaccatcccgtccatggaggagctggctcgattcacc
aacgacagaaacgaatgtatcgtgacagacttcaccatcggccgcaaaggttacggatca
atttactttgaaggagaagtaaatctgactaacttaaatctggacgagatcgttcatatc
cgtagaaaagaagttattgtttaccctgatgatgaaagaaaaccgcctattggtgaaggt
ttaaacaggcgagctgaagtgaccttagacggagtgtggcctacagataaaacctctcgc
tgcctgatcaagagccctgaccggctggcagagatgaactacgagggcaggctggagtct
gtctctcgcaagcagggtgctcgattcaaggaataccgccccgagaccggctcctgggtg
tttaaggtggcacacttctccaagtatggcttgcaggattcagacgaggaggaggaagag
catcctttaaaagtggacgccaagaagttaaaaactgcgcccgtggctcccccagggctc
atgccgccccagcagatggccctggacggcaaaccaacgccgccggctcagagcccggag
gtggagcagctgggccgggtggtagaactggacagcgacatggcagacgtcacccaggag
ccgccccgcgaggctccgccggaggacggcgcggcggaggagcccgaggccgtgcctgcg
tccacccacatcgcgtccagcctcggcgtcaacccccatgtcctgcagattatgaaggct
tccctgcttgccgatgacgatgacctagacctgatcctggatccttaccctgcgaagcca
cctgtgaaaatagacacttcgcaggagatctgctctccgaggctccccatctcaaaacca
cagggacagaagagatactcagctggcgggctgctgcaatccaaatttgccaacataatc
ctccagccgccgagcgccgcagcgcaggaccccaagggagccaggacgtcgagcagcccc
ctgtgcgcccccctttggccggcaacttctccgctggcgcccacgttccccgtgcgccca
tcggtccccgaggtgcccatgaagacggtgggtgtccgcaggcagcaggcgctggtgcct
cgggacaggtccatcgcctacggcaaagggaagctcctgatggacatggcgctcttcatg
ggccgctccttccgcgttggctggggacccaactggacgcttgtcaactctggagatcgg
ttgagcagatcatgcgaaacggaagatcctcagtgcgagcctgtggaatacggattcctg
ccaactcctgtcgctccaaaatccctctcagaatcgtgtttcaaggttcacgtggagaag
ctgagtgtggagcagcggccagcggacagagagcagcagctgtacctcatcccgctggag
atcaagctgcagcacagcacggtgcacatggaccagcactgtcccctcctggcgcccaac
ccgggggtggccgccatccacgactacgctgactgggtgcggaaggcagccgaggatcct
gccctggcggaaacggttgtgaagcactggctgctgacgtggaccctctgcgaagccatc
tgggggaacctgaaggagctggaggccagtttggaggagcccagcgagtacattctggcg
ctggagcgcaggagagccttctcgcgctggctgtcggacacggctgcccgccgcatcgac
gaggaggtgtccctgtcgcgccacggcagccccatcgaggccgtgttcagctgcctgacg
gggaggaggatcggtgaagcctgcaggctggcgcagctgtcgggtgaccaccggctggcg
ctgctcctgtcgcagctggcgggcagccagcccctgcgggacctgctcaccatgcagctg
gtggactggcaccggctgcaggccgactgcttcatccaggaggacaggctgcgtgtcttc
gccctgctggctgggaaacccgtgtggcagttgtcggagagaacgagcatcaacgtgtgc
tcgctgctggactggaagcgctgcgttgccgtccacctctggtacctgctgcctcccaca
gcttccatttccaaggctctggccatgtacgagtcggcatttcagaacacaccagagtgt
gaaaaatacgcctgctgtcccctgcctccctacctggaggattctggttgcgtcattgaa
gaagatgataacgcaggaaggcccctgagagacgtctgcttccatttgttgaagctctac
agtgacaggcactatgacctggagcagctgctggacccccgaagcgtgacgtgcgacccc
ctggaccatcgcctgagctggcacctctgggaggtgctcagggcgctcaactacacccac
ctgggcaggcagggccagggggtgctcaacgctagctacgccgcccagctggagagccgc
ggtctctgggagtgggctgtgttcgtcctgctgcacgagcccgacgcacacacacgggag
aagtcggtgcgcgagctcctgcaccggcactgccagcttgccgagacccccgagtcctgg
gccaaggagaccttcctgacgcagcggctctgcgtcccacacgagtggatccaccaggcc
aaggccgtccgagcacgcgtggagggtgacaggcacagagaagcgctgttcctgttcaag
gccgggcactggaaccagtgccacaagctggtggtccggcacttggcctcggatgcgatt
attaatgaaaactacaagtacctgaaggggtttctggaggacctggcccccccggagcgc
agtgccctcatccaggactgggacacggcggggctggtctacctggattacatccgtgtc
attgagatgctcgacaggattcaacagctggattcttccccctacgagctggagcggtta
cacaccaaagtgacgtcgctgtgcaaccggatagagcagatccagtgccacagcgccaag
gaccgcctggcacagtcagacatggccaagcgcgtggccaacctgctgcgggcggtgctg
agcctgcagcctcccccggagcccggccccccggcctcgccagacccccaaagcgtcccc
ctgcgcctgctggccccacacgtgggccgcctgcccatgcccgaggactacgtgctggag
gagctgcgcgggctcacccagtcctacctgcgcgagctggcggtcacccactga
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integrated database retrieval system
