Caloenas nicobarica (Nicobar pigeon): 135984729
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Entry
135984729 CDS
T11056
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03013
Nucleocytoplasmic transport
cnic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135984729 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135984729 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135984729 (NUP153)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135984729 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
135984729
NCBI-ProteinID:
XP_065483280
LinkDB
All DBs
Position
2:complement(71528815..71574961)
Genome browser
AA seq
1446 aa
AA seq
DB search
MASGGGGGVGGGKIRTRRYHLGAAKPPYARSKQQGIISRVTESVKSIVPGWLQKYFNKSE
DECVDTNESTNQEENPVNYHHDYANEDTIMIDGRITPESARINLEEPSTSRSALNFSDVL
TRPSLHRSHLNCTMLDSTVPHCQPSTSSSFGISSPGLSLVKEIKDSTSQHDDDNISTTSG
FSSRASDKDITVSKNTSAPLLWSTEAERSHSFSQHHAASSKKPAFNLSAFGSPSPSLGNT
SLFKTSQLGDSPFYPGKTTYGGAAAAARETKARIAPYQPPVRRQMKAKQANVQSYGVTSS
TARRILQSLEKMSSPLADAKRIPSSVSSPLSSPVDRSILDITSFQSKRNQMESQHPPVQK
LVTPKAISLSVSRTQYFKPSLSPAADSGKIHQRVDTKHKGMREKSFPAEQRVKPSESNLT
YPKFSPPASNGLSSGAGVGGGGKMRRERGVHYVSKPGQEEQEVEEPVLPKVPLPISTASL
PSFNFSFLASSSVSSSPSTVSTAVTNKVQPASNVGSPVFRFSSPIVKSTEAEVLPPLSQI
GFTFSVPVVKSAELSGSSDTPVTSLLTLDTTTVNSTSNKKGEKEEYNGPSKPAKVLKEGS
VLDILKSPGFTSVKTHSPAPAQPVTSTEVYTRPAISSFSAGKDTSKQASSFWQSDTHDPC
LQNEATDDKCVTCQAAKVSTVESTKQAISSSPCVTSKAAVPAAGTLGFEDKFKPAPNTWD
CDTCLVQNKPEATKCIACETPKPGTGVMPALTLPVVAENSVTVTSSSSSTDTTVTLGFGD
KFKKPKGSWDCSVCLVSNKAEDSKCVACQSEKAGSSVPVTSSSVSAFSAPSGGFLDLDKF
KKPEGSWDCEVCLVENKAEATKCIACESAKPGTKAELKGFGTAAVSTNAAMPSFAFGVQS
PSSESSHTLGSTGNFKFGDHGSFKFGIASESASSNTVTGGFKFPTSSADFKFGVSSSDSK
SEDSKKEGKSNSFTFGLPSTSQAPSTFQFGTASLGQPEKKEEPALGGFGFGTTSTSSIAI
NENKTGVGGFTFGTVAEKEVASPALAFKKSDEKKDETLSTKGGFSFGIVEAAPASQFVLG
RTEEKQDSVTSAAPLAFRKKADNEEQKAQPIFSAGMAEHTKEESTAKPIFNFSFAKPSEK
ESEQAKPTFAFGAQTSNSDQGAAKPSFSFLSSSSSSTVVPTTSANSSSVFGSAISSSNPQ
PVPAPFVFGQPSNTVSSSVFGNSADSAASQSFGFSQENKPATTSSSTGTGSFLFGSGASS
TNTSNSGFNFGATTTSSSTGSSSSFLFGSGPPAPAAGPAFGTSQAPAFGQSQGSSQPSAP
SFGSLSTPLFSAGAQPAPPAFGSVTSSTQPSLFGQQATQQPGFGSGAPSAGSVFQFGSNF
PNSPRVFTFGANLPAPVAPAQPSGSSGFLFSQPPGFTVGTNGKNVFSASGSSVSGRKIKT
AVRRRK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggtggcggcggcggggtcggcggcggcaagatccggacccgccggtaccac
ctgggcgctgcgaagccgccctatgccaggagcaagcagcagggaatcattagcagagtg
acagaatcagtgaaaagcattgtaccaggatggttacagaagtatttcaataaaagtgag
gatgaatgtgtagatacaaatgaatctacaaaccaggaagagaatccagtaaactatcac
catgattatgcaaatgaagataccataatgattgatgggcggatcacgcctgaatcagca
agaattaatttagaagaaccatccacaagtagatctgcattgaacttctcagatgtgtta
acaaggccctctcttcatcggagccatttgaactgtaccatgttggattccacagtacca
cactgtcagccctctacatcttcttcatttggcattagcagtcctggactgtctcttgta
aaagaaataaaagattctacctctcagcatgatgatgataacatctcaacgacgagtggc
ttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcagcaccactg
ctctggtccacagaggctgaaagatctcattccttctcacagcatcacgcagccagctct
aaaaaacctgcattcaatttatctgcttttggatctccttctccttcacttggaaacaca
tctctctttaagacaagccagctgggggattctccgttttaccctggaaagaccacttat
ggtggtgcagctgcagcagcaagggagacaaaggcccgaattgctccttatcagccacca
gtaagaagacaaatgaaagctaaacaagcaaatgtgcaatcctatggtgtgacaagttcc
acagcgcggcgcatcttgcagtcattggagaagatgtcaagccctttggcggatgctaaa
aggattccatcttctgtttctagtccactgtcttctcctgtggacaggagtatactggat
attactagcttccaatccaaacgaaaccagatggaatcacagcatccacctgtccagaaa
cttgtgaccccgaaggccatctctctgtcagtgagtcggacccagtattttaaaccttct
ctgtctccagctgctgattccggcaaaattcaccagagggtggatacaaagcacaaaggc
atgagagagaagagttttcctgcagaacagcgagtaaaaccatctgaaagcaatttgaca
taccccaagttcagtcctcctgcatccaacggtctgtcttcaggagcaggtgtgggtggt
ggtggcaagatgagaagggaacgaggagtacactatgtatcaaaacccggacaagaagaa
caggaagtggaggaaccagtgctaccgaaagtacccctacccatcagtactgcatcactg
ccttcgttcaactttagttttcttgccagtagttctgtctcatcgtcaccaagcactgtt
tcaacagcagtgacgaacaaggtacaaccagcaagtaatgttggcagtcctgtgttcaga
ttttcatctccaattgtgaaatctactgaggcagaagtgctacctccattgtctcagatt
gggtttacatttagtgttcctgttgtaaaatcagcagagctttctggatccagtgataca
ccagtgacatccctactcactctagataccaccactgtaaacagcaccagcaataagaag
ggagaaaaagaagaatacaatggcccctccaaacctgcaaaggtcttaaaggaaggaagt
gtgttagacattctaaaaagccctggctttacatctgtgaaaacacactcccctgcgcct
gcacagcccgttacaagcacagaagtctatacaagacctgcaataagtagtttttctgcg
ggtaaagacacgtctaaacaagcgtcctcgttttggcagtctgacacacatgacccgtgt
ctgcaaaatgaggccacagatgacaaatgtgtaacatgtcaagctgctaaagtgtcaaca
gtcgagagtacaaagcaggcaataagctcaagtccatgtgtcacctctaaggcagcggtc
cctgcagcaggaacgttgggctttgaagacaaattcaaaccagcacccaacacatgggac
tgtgatacctgtctggtccagaacaaacctgaagctacaaaatgcatagcgtgtgagacg
ccaaagcctggaacaggagtaatgcctgctctgacattgccagtggtcgcagaaaactcg
gtgacagtgacgtcctcctccagcagcactgacacaacagtcactctggggtttggagac
aaatttaagaagccaaaaggctcttgggactgttcggtgtgccttgtatcaaataaggca
gaagacagcaagtgtgtagcttgtcagtctgagaaagcagggagttcagtgcctgtgacc
agtagcagtgtttctgcgttttctgctccttctggaggattcttggatttagacaaattc
aagaagcccgaaggaagctgggattgtgaggtctgcttggtcgaaaacaaagcagaagcc
acaaaatgtatagcctgtgaaagtgcaaagccaggcaccaaagcagagctcaaaggtttt
ggtactgctgctgtgtccactaatgctgccatgccatcatttgcatttggtgtccagtca
ccctcctctgaatcttctcatacattaggtagcacaggaaattttaaatttggagatcac
gggagcttcaagttcggcattgcatctgaatctgcatcctccaacactgtgactggggga
tttaagtttcctactagttcagcggacttcaagtttggagtttcttcctcagactctaaa
tcggaagacagtaaaaaagaaggtaaaagtaacagttttacctttggacttccatctaca
agtcaggctccttcaacatttcagtttgggacagcaagcctgggacagccggaaaagaaa
gaggaaccagctttgggaggctttggttttggcacgacttctacttcttccatagctatc
aatgagaataaaaccggagtcggtggcttcactttcggaactgtggcagaaaaggaggta
gcatcgcctgctcttgcatttaagaagtcagatgaaaaaaaggatgaaaccctttcaaca
aagggaggcttctcttttggcattgtggaggctgcacctgcctcacagtttgttttggga
aggacagaagagaagcaggactctgtcacttctgctgctccattagcatttagaaagaaa
gctgacaatgaagagcaaaaggcacaaccgatcttttcagctgggatggctgagcatacc
aaagaggagagcacagcaaagcctattttcaattttagcttcgctaaaccatcggagaag
gaaagtgagcaggcaaagccgacttttgcatttggggcacaaaccagtaattcagatcaa
ggagcagcaaagccatccttcagcttcttgagctcaagttcctccagcactgtcgtaccc
accacttcagccaacagcagcagcgtgtttggcagcgccatctcttcctcaaatcctcag
cctgttcccgctcccttcgtgttcggacaacccagcaacactgtgagcagctctgttttt
ggcaattctgcagactctgcagcatcccagtcatttggcttctctcaagaaaacaaacca
gcaaccacatcttccagcaccggcacagggtcatttctctttggttcgggagccagcagt
accaatacatcgaattcaggctttaactttggagctacaaccacatcaagttcaacaggg
tcatcctcttcgtttctgtttggctctgggcctccagcaccggctgccggcccggcattt
ggcaccagtcaggcaccggcatttggccagagtcaagggtccagccagccgagcgctccg
agttttggatcgctgtcgacgccattgttttcagccggcgctcagcctgctcctcctgcc
ttcggctcggtgacaagcagcactcagccctcgctgtttggacagcaagcgacccaacag
ccgggttttggctccggtgcccccagtgctggttctgtattccagtttggaagtaacttt
ccaaatagccccagagtatttacttttggtgcaaatcttcctgcacccgtagcaccggca
cagccttctggctcttcaggatttttgttcagccagcctccaggatttacagtggggact
aatgggaaaaatgttttctctgcctctggatcttcggtttctggtcggaagataaagact
gcagttagacgtagaaaataa
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