Caloenas nicobarica (Nicobar pigeon): 135984813
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Entry
135984813 CDS
T11056
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cnic00535
]
135984813 (COL14A1)
Proteoglycans [BR:
cnic00535
]
Extracellular matrix (ECM) proteoglycans
Others
135984813 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
VWA_3
Motif
Other DBs
NCBI-GeneID:
135984813
NCBI-ProteinID:
XP_065483474
LinkDB
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Position
2:151402889..151528183
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AA seq
1881 aa
AA seq
DB search
MLCQYEMKSCFLLAFLAVTAFFISDAQGQVSPPTRLRYNVVSPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFSEDKESKPAQGQFRIKDI
ERRKETSKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKDAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIVASLGAPSDLV
TSEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSSSTAVLKNLMSLTEYQI
AVFAIYSNAASEGLRGTETTLALPMASDLQLYDVSQSSMRAKWNGVAGATGYMILYAPLT
EGLAADEKEIKIGEASTDLELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPAN
LKFSDVGHSGAKLTWDPASKNVNGYRIMYVKTDGTETNEVEVGRVSTHTLTSLTSLTEYT
VAIFSLYDEGQSEPLTGSFTTKRVPAPQHLEIDEASTDSFRVSWKPTSSDIAFYRLAWIP
LDGGESEEVVINGDADSHVIEGLLPDTEYEVSLLAVFDDDSESEAVAVLGATSARTSTIP
TTVTTASTVTSKPTTAVFRTGIRNLVIDDETTSSLRVMWEISDYSVQQFRVTYLTAKGDR
AEEAVMVPGRQNTLLLQPLLSDTEYKVTITPIYSDGEGVSVSAPGKTLPLSAPRNLRVSD
EWYNRLRISWDAPPSPTMGYRIVYKPINIPGPALETFVGDDINTILILNLFSGTEYSVKV
FASYSTGFSDALTGVAKTLDLGVTNLDSYQVRMTSLCAQWQLHRHATAYRVVIESLVDGK
KREVNLGGGTPRHCFFELMPGTEYKISVHTQLQEIEGPAVSIMETTLPFPTQPPTTPSTP
PPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIISFLYSTVGALDKIGPDGTQVA
IIQFSDDPRTEFKLNAYKTKETLLEAIQQIAYKGGNTKTGKAIKHAREVLFTGEAGMRRG
IPKVLVVITDGRSQDDVNKVSREMQLDGFSFFAIGVADADYSELVNIGSKPSERHVFFVD
DFDAFTKIEDELITFVCETASATCPLVVKDGNNFAGFKMMEMFGLVEKEFSAVEGVSMEP
GTFNVYPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRILPDTPQEPFALWEILNEKY
EPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKIII
DCKQVSEKTINAAGNISSDGIEVLGRMVRSRGPRDNSAPLQLQMFDIVCATSWANRDKCC
ELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPRGE
IGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQGQR
GLPGKDGPTGPQGPPGPMGIPGAPGVPGVTGNQGPQGDVGAPGPPGAKGERGERGDLQSQ
AMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQGS
PGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGPPG
SPGPRGPAGHTGPPGSQGPSGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSYQI
YDPEDMYDGEQEPYVVHGSYPLPAPYSQSSYPSPHVAQPEFTPVREEMEAAELRSPGISR
FTRRIAKRSIKTPARNRANGK
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtcagtatgagatgaagagctgtttcctcttggcttttttagctgtcacagct
ttcttcatcagtgatgcccagggccaagtgtccccaccaacaagactcagatacaatgta
gtcagtcctgacagtgtacagatctcttggaaagcccccaaagggcaattcactggatat
aagctgcttgtcactccaagttcaggtggaaaaaccaatcaattaattcttcaaaacact
gcaaccaaagcaattattcaaggtcttattccagatcaaaactatgcccttcagatcatt
gcattcagtgaagacaaggagagtaagccagcacaaggccagttcagaattaaagacata
gagagaagaaaagaaacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccagaaggcagcctgttcacttgtaaaactccagcaatcgcagatattgtg
atactggtagatggttcttggagtattggcagattcaatttcagactcgttcgactgttc
ctggaaaacctggtttccgctttcaatgtaggatctgagaaaacaagagtaggtcttgca
cagtacagtggtgatccccgaattgaatggcatttgaatgcctatggcacaaaagatgct
gttttggatgcagtccgtaatctcccgtataagggagggaatacgttaacaggtcttgcc
ttaacttacattttggaaaacagttttaagcctgaagcaggtgcaaggcctggagtatct
aaaattggtatactgatcactgatgggaagtcccaagatgatgttatccctcctgctaaa
aacctacgagatgctggcattgaactatttgctattggtgtaaagaatgcagatataaat
gaactcaaagaaattgcctctgaacctgacagcacacacgtctacaacgttgctgacttt
aacttcatgcataccatcgttgaaggtcttaccagaacggtgtgctcgcgagtagaggaa
caggaaaaggaaatcaaaggaacgattgttgcttcacttggggctccttcggatttggtc
acatcggaggtaacagctcgaggtttccgggtgagctggacccatgcaccaggcaaggtg
gaaaaatacagggttgtgtactaccctactcgaggaggacaaccagaagaggttgtagta
gatggaagctcatcaacagcagttctgaaaaacctgatgtctttaactgagtaccagata
gctgtatttgctatatactcaaatgctgctagtgagggcctccgtgggactgaaactaca
cttgctttgccaatggcatcagatctgcaattgtatgatgtgtcacagagcagcatgaga
gcgaagtggaatggagtagcgggtgccacgggttacatgatcctatatgcacccctcacg
gaaggacttgcagcagatgagaaggagataaaaattggggaggcctcaacagatctcgaa
ctggatggactattgccaaatacagaatatacagtcacagtttatgccatgtttggagaa
gaagctagtgatccccttacaggacaagaaactacattgcctctaagtccgccagcaaac
ttgaaattttctgatgttggacacagtggtgctaagctaacatgggatcctgcttccaaa
aatgtaaacggctatcgcatcatgtatgttaaaacagatggaacagaaaccaacgaggtg
gaagttggtcgtgtttcaacccatactctaacaagtctgacatcccttacagagtatact
gttgctattttctccctgtatgatgaaggacaatctgagccacttactggcagctttacc
acaaaaagagttccagctccccagcatttggaaattgatgaagcatcgacagatagtttt
agggtcagctggaagcccacctcctcagatattgccttttacagattggcatggattcct
ttggatgggggcgaatctgaagaggttgtcataaatggagatgcagacagtcatgttatt
gagggtttgttgcccgacacagaatatgaagtttccttgctggcagtttttgatgatgac
agtgaaagtgaagctgttgctgttcttggagctacatctgcaaggacttctacaatacct
accacggtgactactgccagtaccgtaacatctaagcccaccacagcagtttttcgaaca
ggaatcagaaaccttgttatagatgatgaaacaacctcaagtctgagagtgatgtgggaa
atttcagattacagtgttcagcagttcagagtgacctacctcactgcgaaaggtgaccgt
gctgaggaagcggtcatggtgcctgggagacaaaacactcttctgcttcagcctctgctg
tctgacacagaatacaaagttaccatcactcccatctattctgatggggagggagtcagc
gtctccgctcctggcaaaactttacccttgtctgctcctagaaatctgcgtgtctcagat
gaatggtacaacagattacgtatcagttgggacgccccaccgtcaccaacaatgggttac
agaattgtctacaaacctatcaacattcctgggcctgcgttggagacctttgtaggggat
gatattaataccattctcattctaaatctcttcagcggaacggagtacagtgttaaagta
tttgcctcatactcaacaggcttcagtgatgccctaacaggcgtagccaaaaccttggac
ctgggtgtgacaaatttggattcctatcaagtccgcatgactagcctctgcgctcagtgg
cagcttcacagacatgctactgcatacagggtcgttatagaatcccttgtggatgggaaa
aagcgagaagtaaatcttggtggagggacgcctagacattgtttctttgagctgatgcct
ggaactgaatataaaatcagtgttcatacccagcttcaggagatagagggccctgctgtc
agcatcatggagacaacattaccatttccgactcaaccaccaacaacaccttcaacacca
cctccgccacctacaatccctcctgcgaaagaggtgtgcaaagcagccaaagctgacctg
gcattcctggtggatgggtcatggagtattggagatgacaatttcaataaaataattagc
tttctctatagcactgttggagctttggataaaattggtcctgatggaacacaggtggcc
ataattcaattcagtgatgatcccaggacagaatttaaattgaatgcatacaaaacaaaa
gagactcttcttgaagctattcagcaaatagcctacaaaggaggaaatacaaaaacaggc
aaagccattaaacatgcaagagaagtcttgtttactggagaggcaggcatgagaaggggc
attccgaaggttttagttgtcattactgatgggcgatcacaggacgatgtgaacaaggtc
tccagagaaatgcaactagatggtttcagcttttttgctattggagtagctgatgcagac
tattcagagttagttaatattggcagcaagcccagtgaaagacatgtcttctttgtggat
gactttgatgcctttacaaagattgaagatgagctgatcacttttgtttgtgaaaccgca
tcagcaacgtgcccattggtagttaaagatggcaacaattttgcaggatttaaaatgatg
gaaatgtttggtttggttgaaaaggagttttcagctgtggaaggggtctcaatggaacct
ggtacatttaatgtttacccatgttacagactgcacaaggatgccctggtatcccagcct
accaagtatttgcatccagaaggtctcccttctgattacaccattacgtttctctttcgc
atccttcccgacacacctcaggagccgtttgctctttgggagattttaaatgaaaaatat
gaaccactggttggagttattttagataatggtggtaaaactctgactttttttaactac
gactacaaaggagattttcaaactgtgactttcgaaggtcctgaaataaggaagatattt
tatgggagttttcataagttgcatgttgttatcagcaagactacggccaaaataattatt
gactgcaagcaagtgagcgagaagaccattaatgcagcagggaatattagttctgatggc
atagaggtgctggggaggatggtcagatccagaggaccaagagacaactctgcaccattg
cagttacagatgtttgacattgtttgtgccacctcatgggccaatcgggacaaatgctgt
gagcttcctggcttgagagatgaggaaaattgccctgcccttcctcatgcttgttcctgt
tcagaagctaataagggtccccttggacctcctggaccaccgggtggtccgggtgtccga
ggtgccaaaggtcatcgtggcgatcctggcccaaagggaccagatggacctcgaggagaa
attggtgttccaggaccgcaaggacctccaggaccacaaggacccagtggactttctatt
caaggacttccaggcccaccaggtgaaaagggagagaagggagatctcggttttcctggc
ctgcagggtgtcccaggagcatcaggttcacctggaagagatggagctcaaggtcaaagg
ggccttcctggcaaagacggacccacaggcccacaaggacctcctggcccaatgggcata
cctggtgctccaggtgttccaggtgttactgggaaccaggggccacaaggtgatgttgga
gctcctggtcctcctggagctaagggtgaaaggggtgagcggggtgatctccagtcccaa
gccatggtgcgtgctgttgctcggcaagtgtgtgaacaactcatccagggtcatatggca
agatataactcaattctgaaccagattccaagccagtctgtctcaacacgaaccatcgca
ggaccgcctggtgagccaggtcggccaggggctccagggccgcagggtgaacaaggatca
ccaggcatgcaagggttcccaggaagccctgggcaaccaggaagaccaggagaaagaggt
ttaccaggcgagaaaggagaaaaaggcaatccaggggttggaacacaaggacctcgaggc
ccaccgggatctacaggacctccaggagaaagccgaaccggcagcccagggccaccaggc
tctccaggcccgcggggtcccgctggtcacaccggacccccgggctcccagggtccctct
ggcccgcccggctactgcgacccctcctcctgcgcggggtacggcatgggaggtggatat
ggtgagccaaccgaccaagacatcccagtagtgcagttgccacataactcctaccaaatc
tatgaccccgaggacatgtatgatggtgagcaagagccgtacgtggttcacgggtcctac
cccttaccagccccgtactcccagtcctcctacccatcacctcatgttgctcaaccagag
ttcactcctgttcgagaagagatggaagctgctgagctgagatccccgggaatcagtcgc
ttcacgaggaggatcgccaaacggagcatcaagactccagcacgcaacagggcgaatgga
aaataa
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