Caloenas nicobarica (Nicobar pigeon): 135984814
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Entry
135984814 CDS
T11056
Symbol
ABCD2
Name
(RefSeq) ATP-binding cassette sub-family D member 2
KO
K05676
ATP-binding cassette, subfamily D (ALD), member 2 [EC:
7.6.2.4
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
cnic04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135984814 (ABCD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
135984814 (ABCD2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135984814 (ABCD2)
Enzymes [BR:
cnic01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
135984814 (ABCD2)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD2 subgroup
135984814 (ABCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_23
AAA_29
Rad17
SMC_N
Cyto_heme_lyase
ORC-CDC6-like
Adeno_IVa2
ARID
Motif
Other DBs
NCBI-GeneID:
135984814
NCBI-ProteinID:
XP_065483479
LinkDB
All DBs
Position
1:16488626..16536595
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AA seq
738 aa
AA seq
DB search
MTHMLQAAARRVQWSRASTARRAACLLAAAYGLRILYPVVRRRLRRAGAEGGSQGAGRAG
GDQGPPHGAGSPGRASPAVDAEFFKQLLELRKLFFPKLVSGELGLLCLHSVALVSRTFLS
IYVAALDGKIVKSIVEKQPRSFVFKLIKWLMIAIPATFVNSTIRYLECKLALAFRTRLVD
HAYETYFANQTYYRVISMDGRLANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVVLTSYT
LIRTARSRGANPIGPTLLAGLVVYATARVLKACSPKFGKLVAEEAHKKGYLRFMHSRIIA
NVEEIAFYRGHKVEMKQLQKSYKALADQMNLILSKRLWYIMIEQFLMKYVWSSCGMIMVA
VPIITATGFADGEMEDGQKQAMVSERTEAFTTSRNLLISAADAIERIMSSYKEVTELAGY
TARVHNMFSVFDEVKRGIYKRTAVIQGSENSSKNEDKAELHIDGPLEIKGKVIDVEHGII
CEDVPIITPNGDVVVSGLNFKVEEGMNLLITGPNGCGKSSLFRILSGLWPVYGGVLYKPP
PQHMFYIPQRPYMSIGTLRDQVIYPDSVDDMHEKGYQDQDLECILHVVHLYHIVQREGGW
DAIMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKAAGISLL
SITHRPSLWKYHSHLLQFDGQGGWRFEQLDTAIRLTLSEEKQRLESQLAGIPKMQQRLNE
LCKILGEDSVLKTMDKEE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgacccacatgctgcaggcggcggcccggcgggtgcaatggagcagggcgagcaccgcc
aggagggctgcgtgcctgctggctgcggcgtacgggctcagaatcctctaccccgtggtc
cgcaggcgcttgaggcgggcgggcgcagagggcggctcgcagggagccggccgggctgga
ggggaccaggggccgccgcacggcgccggcagcccgggcagagcctccccggccgtggac
gcggaatttttcaagcagctgctggaacttcgcaagctgttcttcccaaagctggtgagc
ggcgagttgggcttgctctgcctccactcggtcgccctggtttccaggaccttcctctcc
atctacgtggccgccctcgatgggaagattgtgaaaagcatcgtcgaaaaacagcccagg
agctttgtcttcaaattaatcaaatggctgatgattgcgatcccggccactttcgtgaac
agcaccatacggtacctggagtgcaagttggccctcgcgttccgcacgcgcttggtggat
cacgcctatgagacctactttgccaaccagacgtactacagagtgatcagcatggacggg
cggctggccaaccccgaccaatccctcaccgaggacatcatgatgttctcacagtccgtg
gcacatctctactccaacctcaccaagcccatcctggatgtcgtgctcacctcctacacc
ctcatccgcacagcacggtcccggggggcgaaccccattgggcccacgctcctggccggg
ctcgtcgtctacgctacagcccgggtgctcaaagcctgctcgcccaagtttggcaagctg
gtggctgaggaggcgcacaagaagggctatctgcgcttcatgcattcacgcatcattgcc
aacgtggaagagatcgccttttaccgagggcacaaggtagaaatgaaacaactgcaaaaa
agctacaaggctttggcagatcagatgaatctcattttgtccaaacgtttgtggtacatc
atgatagaacagttcctgatgaagtatgtctggagtagctgtgggatgattatggtcgct
gtgcccatcatcactgcaacaggatttgcagatggcgaaatggaagatggccagaaacag
gcaatggttagtgaaagaacagaagcttttactacatcacgaaacctgttgatctctgca
gcagatgctattgaaaggattatgtcttcatataaagaggttactgagctagcaggctac
accgcccgtgtccacaacatgttttcggtctttgatgaggtgaagagaggcatctacaag
agaactgctgttattcaagggtctgaaaacagcagcaagaatgaagataaagcagaatta
cacattgatgggcccttagaaatcaaaggaaaagttattgatgttgaacatggaattatt
tgtgaagatgttcctattattactccgaatggcgatgtggtggtttccggactaaacttc
aaagttgaggaggggatgaatcttttaatcactggacccaatggctgtggaaagagttca
ctcttcagaattttaagtggtttgtggcccgtgtatggaggagttctctataaaccccct
ccacagcacatgttttatataccacaaagaccctacatgtccattggaacgttacgtgat
caagtcatctatccagactcagtggatgacatgcatgagaaaggctaccaagatcaagat
ctggagtgtatcctgcatgtggttcatctgtaccacatagttcaaagagaaggaggctgg
gatgccataatggattggaaagatgtcttgtcaggaggagaaaaacaaaggatgggcatg
gctcggatgttttaccataagccgaaatatgcattgctggatgaatgcacgagtgctgta
agcattgacgttgaaggaaagatattccaagctgcaaaagccgctgggatatccctgcta
tctataacacacagaccttcactttggaagtaccacagtcacctgctgcagtttgatggc
caaggcggctggcgtttcgagcagttggacaccgctatccgtttgacactgagtgaggaa
aaacagagactggaatcccagcttgcaggaattcctaaaatgcagcagagactgaatgaa
ctgtgtaaaatcttgggagaagactcggtgcttaaaacaatggacaaagaggaatag
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