Caloenas nicobarica (Nicobar pigeon): 135984915
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Entry
135984915 CDS
T11056
Symbol
HELB
Name
(RefSeq) DNA helicase B isoform X1
KO
K15254
DNA helicase B [EC:
5.6.2.3
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnic03032
]
135984915 (HELB)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135984915 (HELB)
DNA replication proteins [BR:
cnic03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
135984915 (HELB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
AAA_11
ABC_tran
NPHP3_N
CbiA
AAA_23
ParA
AAA_16
Rad17
RsgA_GTPase
nSTAND3
NB-ARC
ArsA_ATPase
AAA_14
AAA_15
Motif
Other DBs
NCBI-GeneID:
135984915
NCBI-ProteinID:
XP_065483788
LinkDB
All DBs
Position
1:37740794..37763927
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AA seq
1066 aa
AA seq
DB search
MAAAGGQRGAAAELWGVLLPPRRAAAGEEEESEEEAEEEPHLEEAALLDASGPELQAALP
PRRAVVIQEENSRKEYEVVGRFPLVGPWWRVNVKVKKMGSKYFVQGYPSYFLRTDIEENN
RQVFSLFLKECAVPEYFIGKFFTWFPTESMLSFRNLEEKLKEFQASHLQTGKKQGDTKDY
DIFYYVLKSFAGKAVLVALTFPMILEFLPILLPRHFCCLLDMVHWQGETEENNGMDGEEL
CFQDTMLTKLDEILKNEPWKLGFSRITYRELNLSYCEATWAAFCQCEHLLWKIPDLQKNA
LILYDQLKRKCREMGHTYEDQDELARFVSKDMSIEHAWQSLEFLKDQNIVIRKKTLVFLP
HLYKSEEDIAKYIGDLVSNSSWQLDVDVGKILNVSETSRETVDNKMNVTQDHQVEHLKEN
SPDNHNCENHFPEKEVGSASGTQSKAKVDLDQVVAVQRICSNPVTIISGKGGCGKSTIVS
CLFRHLKQMEKEVEAASRDFEEDLDASEEWNTFDHHCESENMYTKKILNVLFTAPTGRAA
SLLSEKTKLPAYTLHQIIYSFKSWMRSEQVQPWKFSTVTILIVDEGSLVSVHILSLVLKL
LCEHAQLAKLIILGDTRQLPSIDPGNMLADIFEGLKSRGFSVELRTNHRAESQLIVDNAS
RISHRKLPEFDEVLHVSAWNEEMTIPSPEKKFILIALPTGGGCDDLQTAIKTLLKKGPGL
QDAKQSQFIAFRRQDCDLINELCCQHYSDHLTRDHKNRLLFQIGDKISCTRNTYLKDLLP
DPGFREDPNRHECNSGETTLTTEAVDEGKRLCNGDIFFITGDVEIDKQRLLTISSTYGST
FTVRYKALKKLCHIKHAWARTIHTFQGSEEKTVVYVVGNPGRQHWQHVYTAVTRGRCRVY
IVAEEMHLRRAVTNKNVPRKTCLQRFLREAVAETSNCPSQTSSPLTKSQQSQELETGSAA
VTQGAPDPPEPLADLVKQEQGSAVLNKEQLGHVQQSPCKRQHSLAENSEDAVKKPSETVE
DSPLGSSRLKSLTLGQPTARKLFKGTKVELDPTSDKLQKPTKQGTL
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggcgggcagcggggcgccgcggcggagctctggggggtgctgctgccc
ccgcggcgggcggcggcgggcgaggaggaggagagcgaggaggaggccgaggaggagccg
cacttggaggaggccgcgctcctggacgcttccgggccggagctgcaggccgctctgccc
ccgcgccgagccgttgttatacaagaagagaactccagaaaggagtatgaagtagttgga
cgttttcccttagttggcccttggtggagggtcaacgttaaagttaaaaaaatggggtcg
aagtactttgtgcaaggatatccatcgtattttctgcggactgatatagaagaaaacaac
cgacaagtcttttcactctttcttaaggaatgtgctgttcctgagtattttataggaaag
ttttttacttggtttcctacggaatctatgctgagttttagaaatcttgaagaaaaacta
aaagaattccaagcttcacacttacagacaggaaagaaacaaggagacaccaaggattac
gatatcttctactatgttttgaaatcatttgcaggaaaggcggtgttggtagctctgact
tttccaatgatactggaattcttgccaattcttctgccacgccatttttgctgtctgttg
gatatggtgcattggcaaggagagactgaagaaaacaatggtatggatggtgaggaacta
tgttttcaagacacaatgctaacaaagttggatgagatattaaagaatgagccgtggaag
cttggattcagcaggattacttatagggaactgaacctttcttactgtgaggcaacgtgg
gctgccttctgccagtgtgaacatctcctctggaagattcctgacttgcagaaaaatgca
ttaattctgtatgatcaactcaagagaaagtgtagagaaatgggacacacttacgaagat
caagatgaattagctcgttttgtatctaaagatatgtccattgagcatgcttggcaatct
cttgagtttttgaaagatcagaacatagtgattaggaagaaaacactagtgtttctgcct
catctttacaaatctgaagaagacattgcaaagtatataggtgaccttgtgtcaaacagc
tcatggcaactggatgttgatgtgggaaagatacttaacgtttctgagacatcaagagaa
acagtagataacaaaatgaatgttacccaggaccatcaagtggaacatctgaaggaaaac
agtccagacaatcacaactgtgaaaatcactttcctgaaaaggaggtggggtctgcatct
ggcacccaaagtaaagcaaaggtagacttggatcaggtggttgctgtgcaaaggatttgt
tccaatcctgtcacaatcataagtggaaaaggaggctgtgggaagagtacaatagttagc
tgcctttttcgtcacttaaagcaaatggaaaaagaagtggaagctgcttctagggacttt
gaagaagacctggatgcgtctgaggaatggaatacctttgatcatcattgcgagtcagag
aatatgtacacaaaaaaaattttgaatgtgctatttactgcacctacagggagggcagcg
agccttttgagtgaaaaaactaaacttcctgcatatacactgcatcagatcatctacagt
tttaaatcgtggatgcggagtgaacaagtacagccgtggaagttttctactgtgacgatt
ctaattgtggatgaaggaagtttggtgtctgtgcacattctcagtttagttttaaaactc
ttgtgtgagcatgctcagcttgccaaacttattattctaggtgatactagacagctacca
agcatagacccaggaaacatgttagctgatatctttgagggtctgaaatcaagaggcttt
tctgtggaactgcgaactaatcacagagctgaatcgcagctcattgtagataacgcctca
agaatctctcaccggaagcttcctgaatttgatgaggtgctgcatgtctctgcctggaat
gaggaaatgacaataccaagcccagagaagaaattcattcttatcgctttgcccactggt
gggggttgtgacgatttgcaaactgccataaagactttacttaaaaaaggaccgggattg
caggatgccaaacaatcgcagttcattgctttcagaaggcaagattgcgatctaataaat
gaactttgttgccaacactattcagatcatctaaccagagaccataaaaaccgactttta
tttcaaattggtgacaagatttcctgcacacggaacacgtatctcaaggatctcttgcca
gacccaggtttcagagaggatcccaatcgccatgaatgcaacagtggagaaaccaccctg
actacagaggctgttgatgagggcaaacgactgtgcaatggagatatatttttcataaca
ggggatgtagaaattgataaacagcgtttattgaccatcagcagcacgtacggctccaca
ttcactgtgcggtataaggccctgaagaagctgtgtcatatcaaacatgcatgggccaga
actattcacacgtttcagggttctgaggaaaaaactgttgtctacgtggtcggcaatcct
ggccgccagcactggcagcatgtgtacacagccgtgaccagaggacgctgccgcgtctac
attgtagctgaagagatgcacctcaggagagcggtcaccaacaagaacgttcccaggaaa
acttgcctacagagatttttgagagaggcagtcgcggaaacaagcaactgtcccagccaa
acttcctctccgctgacgaagagccagcaaagtcaagagcttgagaccgggtctgctgct
gtgactcaaggtgctcctgacccacctgaacctctggccgacttggtgaagcaggaacaa
gggtcagcagttctcaataaagagcagctgggccatgtccagcaaagtccgtgtaagaga
caacacagtcttgcagagaactctgaggatgctgtgaaaaaaccctctgaaacagtagaa
gattccccacttgggtcttccagacttaagagtctaactttgggacagccaactgccagg
aagcttttcaaaggcactaaagtggagctggatccaacctcagacaaactacagaagcct
acgaaacaggggactctctga
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