Caloenas nicobarica (Nicobar pigeon): 135985095
Help
Entry
135985095 CDS
T11056
Symbol
GLI3
Name
(RefSeq) transcriptional activator GLI3 isoform X1
KO
K06230
zinc finger protein GLI3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
135985095 (GLI3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135985095 (GLI3)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
135985095 (GLI3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
DUF7565
Motif
Other DBs
NCBI-GeneID:
135985095
NCBI-ProteinID:
XP_065484114
LinkDB
All DBs
Position
2:complement(56896896..57112592)
Genome browser
AA seq
1575 aa
AA seq
DB search
MEAQSHSSTTTEKKKVENSIVKCSSRTDVSEKAVASSTTSNEDESPGQTYHRERRNAITM
QPQGGQGLGKISEEPSTSSEERASLIKKEIHGSISHLPEPSVPYRGTLFTMDPRNGYMDP
HYHPPHLFPAFHPPVPIDARHHEGRYHYEPSPIPPLHVPSALSSSPTYSELPFLRISPHR
NPAATSESPFSTPHPYINPYMDYIRSLHSSPSLSMISAARGLSPTDAPHAGVSPAEYYHQ
MALLAGQRSPYADIIPSAATAGAGALHMEYLHAMDSARFPSPRLSARPSRKRTLSISPLS
DHSFDLQTMIRTSPNSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYPPTPVSLQQM
HQQIISRQQTLGSAFGHSPPLIHPAPTFPTQRPIPGIPSVLNPVQVSSGPSESTQQNKPT
SESAVSSTGDPMHNKRSKMKPDEDLPSPGAGSVQEQPEGMTLVKEEGDKDESKQEPEVVY
ETNCHWEGCSREFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMR
RHTGEKPHKCTFEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQN
RTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDIHPRPPPPRDPGS
HSQTRSPGHQTQGAIGEQKDLSNTTSKREECLQVKAVKSEKPMTSQPSPGGQSTCSSEQS
PISNYSNNGIELTLTGGGSVGDLSVIDETPIMDSTISTATTALGLQARRNMTGTKWMEQV
KLERLKQVNGMLPRLNPVPPSKAPTLPPLIGNGTQSNSSCSVGGSMTILPNRNELSSTDI
TVLNMLNRRDSNTSTISSAYLSSRRSSGISPCFSSRRSSDASQAEGRPQNVSVADSYDPI
STDASRRSSEASQCDDLPSLLSLTPAQQYRLKAKYAAATGGPPPTPLPNMERMSLKTRMA
LLGDCRESGVSPLPPVNAPRRCSDGGANGYSRRHFLSHDALGNGMRRASDPVRMASDNLS
VPRVQRFNSLNSFNPPALPPSTEKRNLVLQNYTRSEGGVFCGFSSPCPPSISENVALEAA
TMEAGGSLNDEDLLPDDVVQYLNSQNQGMYDHLLNNVLDSNKMHHSSVLGNNNPSNFDQA
PPPSSQQAGSEANKSDLPIQWNEVSSGSSDLSPLKLKCGQRSAVQQARAFGLYNNMMVQQ
QNLERSTVAQQNGYQNLVENNGSYGLQQNMVLGNGAGNSFSMQPNKPYSESIGRQAMMSG
AMDSSCSVAVQGQKLRNSNMPVSGNQQNFGHPMASSDQATSMTNGMQNRNMMEQDYLQNQ
PVGDGVHYQGVNQSGQMMLGQVSPTSQSSLYQGPQSCPPVSHTIGSQPSGSLVAKSYQPC
SNYSGNRWQNILRNNVAQQQGHVSDGNQMYRVNTIKVEMQGQSQQFCSNVQNYSGQLYDQ
TTGFSHQAMKTGSFFGSEANCLLQGTATANSSELLSPGANQVSSTVDSIDSNSLEGVQID
FDAIIDDGDHVSLISGALSPSIIQNLSRNSSRLTTPRASLTFPAMPVSTTNMAIGDMSSL
LTSLAEESKFLAVMQ
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcagtcccatagctctaccacgacggagaagaaaaaagtggagaattccatc
gtgaaatgctccagtcgaacagatgtcagtgagaaagctgttgcctccagcacaacttcc
aatgaggatgaaagtcctgggcagacctatcacagagagagacggaacgcgatcacaatg
cagccgcagggtgggcaaggcctcggcaagatcagtgaagagccttccacgtcaagcgag
gaaagggcctcattaatcaagaaggagatccatggatctatatcgcaccttcccgaacct
tctgtaccttaccgcgggacgctctttaccatggacccccgaaacggttacatggaccct
cattaccatccgcctcacctctttccagcattccaccctcctgtaccaattgatgcgaga
catcatgagggacgctaccattacgaaccatctcccattcctcctctgcatgtgccttct
gcgttatctagtagcccgacatactcagagcttccgttccttagaatttccccacaccga
aatcctgctgcaacgtcggagtctcccttcagcaccccgcacccgtacattaacccgtac
atggactacatcaggtccctgcacagcagcccgtccctctctatgatctcagcagcccgc
ggactcagcccaacagacgctccacatgctggcgtcagtccagctgaatattatcatcag
atggctctgttggccggccagcgcagcccctatgcagacatcattccttcagctgccact
gcaggagctggtgctcttcatatggaatatcttcatgccatggatagcgccaggtttccg
agtccgagattgtcagccagaccaagccgaaagcgtacattgtccatatcccccctatct
gatcacagctttgaccttcagaccatgataaggacatctccaaattccttggtcacaatt
ctcaataattctcgtagcagttcctcagccagtggttcttatggccacttatctgcaagt
gcaataagccctgctctgagtttcacataccctcctacaccggtatccctccagcaaatg
catcagcaaattataagtcgtcagcaaaccctaggttcagcctttggacacagccctcca
cttatccatcctgctccaacttttcctacccagagacctatccctggcatccccagtgtc
ctgaaccctgtccaggtcagctctggaccttctgagtccacacagcagaataaacccaca
agtgaatctgcagtgagcagcactggagatcccatgcacaacaagcgctccaagatgaag
cccgatgaggacctccccagcccgggagcaggaagcgtgcaggaacagccagaaggaatg
accctggtaaaagaggaaggggacaaagatgaaagcaaacaggagcctgaagtggtctat
gagacaaactgccactgggaaggctgttcccgggagttcgacacgcaggaacagctcgtg
catcatataaacaacgaccacatacatggcgagaagaaagagtttgtgtgccgatggctg
gactgttcccgggagcagaaaccgttcaaagcccagtatatgctggtggtccacatgagg
agacatacaggggaaaagccacacaaatgcacttttgaaggttgtacaaaggcctactcc
agactggagaacttgaaaacgcacttgagatctcacaccggagaaaaaccatatgtgtgt
gagcacgaaggctgcaacaaagcgttctccaacgcgtcggacagggccaagcaccaaaac
aggactcattccaatgagaaaccgtatgtttgcaagataccgggctgcacgaagcgctac
acagaccccagttctctccggaaacacgtgaagaccgtgcatggcccggaggcacatgtc
accaagaagcaacggggagatatccacccgaggcctccgccaccgagagacccaggcagc
cactctcagacccggtcaccaggccatcagactcagggtgcaattggtgagcagaaggac
ctcagcaacactacctcaaagcgtgaagaatgcctccaagtgaaagcggtcaaatcggaa
aaaccaatgacatctcagccaagccctggtggtcagtctacatgcagcagcgaacagtcc
cccatcagcaactattccaacaatgggatcgagcttactctgaccggtggtggtagtgta
ggagacctcagtgtcatcgatgaaacccccatcatggactctaccatttccacagccacc
acagcccttggcttacaggccaggaggaatatgacagggaccaaatggatggagcaagtg
aaattagaaaggttgaaacaagttaatggaatgcttccaagactgaaccccgttccacct
tccaaagccccgaccttgccgcctctcataggaaatggtacccagtcgaacagcagctgc
agtgtaggaggatccatgactattctgccaaacaggaatgaactttcaagtacggacatc
actgtgttgaacatgctgaacaggagggacagcaatactagcacaatcagttcagcctac
ttgagcagccgcaggtcctctggaatctcaccttgcttctccagccggaggtccagcgac
gcctcccaggcggagggaagaccacagaacgtgagcgttgcagactcctatgaccccatc
tcgacggatgcctcccggcgctccagtgaagcgagccagtgtgatgacctgccaagcctt
ctcagcctcaccccagcccagcaatacaggctgaaagctaaatatgcagcagctactggt
ggacccccaccaactccactgcctaacatggagaggatgagcctcaaaacaaggatggca
ctcttgggtgactgcagggagtccggagtatctccactgcctccagtgaatgcccctcga
agatgtagtgacggtggggcaaatggttacagcaggaggcattttctgtctcatgatgct
ctaggaaatgggatgaggagagccagtgatccagtaagaatggcctccgacaacctctct
gtccctagagtccagcgtttcaacagtcttaatagctttaaccctcctgctttgcctcca
tccacggaaaagcgcaacctcgttcttcagaactatacccgttctgagggcggcgtcttc
tgcggcttcagctccccctgtcctcccagtatcagcgagaacgtcgccctggaggctgct
acgatggaagcgggtggcagtctgaacgatgaggatctcctgccagatgacgtggttcag
tatctgaattcccagaaccagggcatgtacgaccacttgttgaacaatgtcctagacagc
aacaaaatgcatcacagctcagtgttaggaaacaacaaccccagcaattttgaccaagcc
cctccaccgagcagtcagcaggcaggttctgaggcaaacaagagcgacttgcccattcag
tggaatgaagtaagctcaggaagttctgacttatctcctttgaaactgaaatgcggtcag
cgctcagcggtgcagcaggctcgggccttcggactgtataacaacatgatggttcagcag
cagaacctggagagaagcaccgtggcccaacagaacggctatcagaacctggtggaaaac
aacggttcctacggtttacagcaaaacatggttctgggcaacggagccggtaattctttc
agcatgcagcccaataagccttacagtgaaagcatcggcaggcaagcgatgatgtctggg
gcaatggacagttcctgtagtgtggcggttcaagggcagaagctgagaaacagcaacatg
ccagtgagtgggaaccagcaaaatttcggccatcccatggcctccagtgatcaagccact
agtatgacaaatgggatgcagaacaggaatatgatggaacaggactatttgcaaaaccag
ccagtcggagacggcgttcattaccagggagtcaatcaatctggtcaaatgatgctaggg
caggttagtcctacctcacaaagcagcctgtatcaagggccgcagagctgtccaccggtg
tctcacaccattggtagccagccttcaggttcgttggtggccaaaagctaccagccgtgc
tctaattacagtggcaacagatggcaaaacatcttgagaaacaacgtggcacaacagcaa
ggacacgtaagtgatggcaaccagatgtacagggtaaacaccattaaggtggagatgcaa
ggtcaatcacagcagttctgctctaacgtgcagaattactctggtcagttatatgaccaa
accacgggctttagccaccaagctatgaaaacaggttctttctttggttcggaagccaac
tgcctgctgcaggggactgcgactgcaaattcatccgagcttctttccccaggggctaac
caagtgtcgagcacagttgacagcattgacagcaacagcctagagggtgtgcagattgat
ttcgatgctatcatagatgatggggaccacgtcagcttgatttcaggagccctgagccca
agtatcattcagaatctctcccgcaattcctcacgcctcaccactccccgagcgtctctt
acattcccagcgatgcccgtaagcacaaccaacatggctattggggacatgagctctttg
ttgacctcgcttgcagaagaaagcaagtttcttgctgttatgcaatag
DBGET
integrated database retrieval system
